Inspired by recent work of Fink, Reeves, Palma and Farr [1] on innovation in language, gastronomy, and technology, I study how new symbol discovery manifests itself in terms of additional "word" vocabulary being available from dictionaries generated from a finite number of symbols. Several distinct dictionary generation models are investigated using numerical simulation, with emphasis on the scaling of knowledge as dictionary generators and parameters are varied, and the role of which order the symbols are discovered in.

Genetic switches can be utilized for many purposes in synthetic biology including the assembly of complex genetic circuits to achieve sophisticated cellular systems and the construction of biosensors for real-time monitoring of intracellular metabolite concentrations. Although genetic switches have mainly been developed in prokaryotes to date, eukaryotic genetic switches are increasingly being reported as both rational and irrational engineering technologies mature. In this review, we describe genetic switches in yeast based on synthetic transcription factors and/or synthetic promoters. We also discuss directed evolution technologies for the rapid and robust construction of yeast genetic switches.

Permafrost thaw is an important aspect of Earth’s carbon cycles. Initial estimates suggest that permafrost thaw could contribute anywhere between 20 to 500 Gt of CO2-eq by 2100. These estimates are all fundamentally centered around one number: active layer thickness (ALT). The deeper the ALT, the more emissions. Unfortunately, ALT is a highly spatially heterogeneous number and determined by numerous thermal, soil hydrology, and geomorphological effects. The remotely sensed active layer thickness (ReSALT) algorithm was introduced in 2010 to provide scientists with a way to model ALT heterogeneously at meter-scale resolution. However, upon inspection, this work shows that ReSALT’s modeling approach is self-inconsistent when using a variable soil porosity model. This work then introduces SCReSALT (Self-Consistent ReSALT) to solve that problem. Experimental comparisons to a past study in Utqiagvik (formerly Barrow), Alaska show significant improvement and suggest that SCReSALT should become a standard tool in permafrost thaw modeling. Code to reproduce all results can be found at https://github. com/jmathur25/permafrost-prediction.

Abstract: With a resurgence in ITRT (Immediate Tooth Replacement Therapy) as a method of preserving both hard and thus soft tissues for improved aesthetic outcomes, this multi-centre, retrospective study will look at two novel products and their effect on these outcomes. A new synthetic particulate graft material along with a novel Implant design was utilized in the study and a 1 year follow up assessment, analysed for hard and soft tissue regeneration.

In this paper we propose the generation of synthetic small and more sophisticated molecule structures that optimize the binding affinity to a target (ASYNT-GAN). To achieve this we leverage on three important achievements in A.I.: Attention, Deep Learning on Graphs and Generative Adversarial Networks. Similar to text generation based on parts of text we are able to generate a molecule architecture based on an existing target. By adopting this approach, we propose a novel way of searching for existing compounds that are suitable candidates. Similar to question and answer Natural Language solutions we are able to find drugs with highest relevance to a target. We are able to identify substructures of the molecular structure that are the most suitable for binding. In addition, we are proposing a novel way of generating the molecule in 3D space in such a way that the binding is optimized. We show that we are able to generate compound structures and protein structures that are optimised for binding to a target.

Synthetic biology uses engineering principles to redesign organisms and construct biological systems with specific functions, which is an important way to develop drugs, vaccines, biofuels, etc. In the process of transforming synthetic organisms, researchers need to conduct large-scale experiments for a long time, and many of these processes are manual and repetitive tasks, which results in the problems such as low throughput, low efficiency, and slow iteration. In addition, there are many experimental instruments and equipments required in the synthetic biology experiment process. The communication protocols between different instruments and equipments are not uniform, which seriously restricts the automation upgrade process of synthetic biology. To solve these problems, this paper put forward an integration technology based on the Object Linking and Embedding for Process Control Unified Architecture (OPC UA) to realize the interconnection of the synthetic biology automated casting platform and related instruments needed in synthetic biology process. The stability of the system is further designed and improved by using the concept of Triple Modular Redundancy. This helps the development of an efficient, stable and scalable automated casting platform for synthetic biology, which greatly improves the efficiency of synthetic biology experiments.

Advances in genetic engineering have placed synthetic biology at a prime position to develop new products, materials, and services that could contribute to the 2030 UN Sustainable Development goals. These include novel materials for water purification, new bio-based products to replace toxic industrial chemicals, and engineered organisms for bioremediation. Supporting the development of synthetic biology initiatives in developing countries is needed to ensure these benefits are open to all.

Minimal plasmids play an essential role in many intermediate steps in molecular biology. They can for example be used to assemble building blocks in synthetic biology or be used as intermediate cloning plasmids that are ideal for PCR-based mutagenesis methods. A small backbone also opens up for additional unique restriction enzyme cloning sites. Here we describe the generation of pICOz, a 1185 bp fully functional high-copy cloning plasmid with an extended multiple cloning site (MCS). To our knowledge, this is the smallest high-copy cloning vector ever described.

Endocrine disruptors are molecules that can interfere with the proper functioning of the endocrine system and lead to harmful effects in living organisms. This review focuses on the impact of synthetic fragrances, which are commonly found in personal care and household products, on the endocrine system. The article discusses the different types of hormones in the body and how they interact with receptors to produce signals. It also explores how endocrine disruptors can interfere with hormone signaling and transport, leading to adverse effects in the body. This work underscores the crucial need for further research into the impact of synthetic fragrances on the endocrine system and the importance of using safer alternatives in personal care and household products.

Intellecta dataset emerges as an innovative synthetic dataset, engineered to enhance the cognitive processing capabilities of contemporary language models. With a composition of 11.53 billion tokens, integrating 8.01 billion tokens of synthetic data with 3.52 billion tokens of rich textbook data, Intellecta is crafted to foster advanced reasoning and comprehensive educational narrative generation. Leveraging the Mixtral-8x7B-Instruct-v0.1 model, the dataset facilitates the generation of complex thought processes and detailed, textbook-style explanations, thus enabling language models to engage in both critical thinking and profound educational discourse. This hybrid dataset stands as a testament to the potential of synthetic data in pushing the boundaries of AI, offering a repository that is not only vast and varied but also refined to align with ethical standards and intellectual rigor.

Active flow control is a promising technology for reducing noise, emissions, and power consumption in various applications. To better understand the performance of synthetic jet actuators, a computational model that couples structural mechanics with electrostatics, pressure acoustics, and fluid dynamics has been needed. The model presented here has been validated against experimental data and then used to investigate the fluid behavior inside and outside the synthetic jet actuator cavity, impacts of thermoviscous losses on capturing the acoustic response of the actuator, and viability of different modeling methods of diaphragms in computational simulations. The results capture the feedback from the fluid onto the diaphragm and highlight the need for careful acoustic modeling.

Plant-based insecticides are considered among the most economical and eco-friendly chemicals for the protection of field plants and even stored grains. The sweet melon (Cucumis melo L.) insect pest causes more than 90% damage to most melon leaves, vines, and balls at its growth stage. The study looked at how effective the plant extract from Africa Basil and the synthetic insecticide Cymbush were at killing insects on sweet melon (Cucumis melo L.). The study explored four different concentrations (2.5, 50, 75, and 100%) and a synthetic insecticide, Cymbush, against insect pests of sweet melon and compared the effects of distilled water, which is used as a control in a Randomized Complete Block Design (RCBD). The toxicity percentage levels of the African basil extracts against field pests of sweet melon were 25, 50, 75, and 100%. Maximum plant protection of the crop was achieved by the synthetic insecticide Cymbush (3.0 pest point), followed by Africa basil extract B100 (3.3 pest point), whereas weak and minimum insect pest protection were observed in the control (5.53 pest point). In conclusion, these results indicate the utility of African basil plant extracts against field insect pests of sweet melon as potential botanicals to control field insect pests and mitigate the hazardous use of synthetic insecticides on humans, animals, and the environment

During early embryonic development, fertilized one-cell embryos develop into preimplantation blastocysts and subsequently establish three germ layers through gastrulation during post-implantation development. In recent years, stem cells have emerged as a powerful tool to study embryogenesis and gastrulation without the need for eggs, allowing the generation of embryo-like structures known as synthetic embryos or embryoids. These in vitro models closely resemble early embryos in terms of morphology and gene expression and provide a faithful recapitulation of early pre- and post-implantation embryonic development. Synthetic embryos can be generated through a combinatorial culture of three blastocyst-derived stem cell types, such as embryonic stem cells, trophoblast stem cells, and extraembryonic endoderm cells, or totipotent-like stem cells alone. This review provides an overview of the progress and various approaches in studying in vitro embryogenesis and gastrulation using stem cells. Furthermore, recent findings and breakthroughs in synthetic embryos and gastruloids are outlined. Despite ethical considerations, synthetic embryo models hold promise for understanding mammalian (including human) embryonic development and have potential implications for regenerative medicine and developmental research.

Mucus is a critical part of the human body’s immune system which traps and carries away various particulates such as anthropogenic pollutants, pollen, viruses etc. Various synthetic hydrogels have been developed to mimic mucus, using different polymers as their backbones. Common to these simulants is a three-dimensional gel network which is physically crosslinked and is capable of loosely entrapping water within. Two of the challenges in mimicking mucus using synthetic hydrogels include the need to mimic the rheological properties of the mucus and its ability to capture particulates (its adhesion mechanism). In this paper, we review the existing mucus simulants and discuss their rheological, adhesive and tribological properties. We show that most, but not all, simulants indeed mimic the rheological properties of the mucus but only one mimics the ability of mucus to capture particulates.

While rapidly becoming a main thread in the development of new therapies, the rise of synthetic biology is also tied to concerns about the potential impact on ecosystems. That is particularly relevant in the of deployment in natural habitats, including the human microbiome. These concerns have boosted the analysis of diverse strategies of containment, from engineered cell death to xenobiology to the creation of Xeno nucleic acids. However, little attention has been paid to the potential containment implicit in nonlinear ecological interactions and the lessons provided by the population dynamics models used in community ecology. If we consider synthetic strains as some class of "species" embedded within an ecological context, it is possible to show that some network interaction patterns and their associated nonlinear responses can offer a reliable source of containment. Here we present and discuss some simple examples of these "ecological firewalls" that could help provide a self-regulating biocontainment. Our firewall designs can help to ensure that engineered organisms have a limited spread while, when required, preventing their extinction. The basic synthetic designs and their dynamical behaviour are presented, each one inspired in a given ecological class of interaction. Their possible applications are discussed and the broader connection with invasion ecology outlined.

Sentinel-1 (S1) extra-wide (EW) swath data in cross-polarization (horizontal-vertical, HV or vertical-horizontal, VH) are strongly affected by the scalloping effect and thermal noise, particularly over areas with weak backscattered signals, such as sea surfaces. Although noise vectors in both the azimuth and range directions are provided in the standard S1 EW data for subtraction, the residual thermal noise still significantly affects sea ice detection by the EW data. In this paper, we improve the denoising method developed in previous studies to remove the additive noise for the S1 EW data in cross-polarization. Furthermore, we propose a new method for eliminating the residual noise (i.e. multiplicative noise) at the sub-swath boundaries of the EW data, which cannot be well processed by simply subtracting the reconstructed 2-D noise field. The proposed method of removing both the additive and multiplicative noise was applied to EW HV-polarized images processed using different Instrument Processing Facility (IPF) versions. The results suggest that the proposed algorithm significantly improves the quality of EW HV-polarized images under various sea ice conditions and sea states in marginal ice zone (MIZ) of the Arctic. This is of great support for the utilization of cross-polarization SAR images in wide swaths for intensive sea ice monitoring in polar regions.

Crouch gait is one of the most common gait abnormalities. In the literature, there are few works related to the crouch gait recognition. In this work, we aim at the integration of a framework for multiclass crouch gait recognition using synthetic eight-DoF model gait data in anatomical space. The main contribution of our study is the joint function generator algorithm, which could be used to generate other physiological signals; and the gait data validation stage. In addition, we use a feature selection method and a body region segmentation approach to improve classification performance. We generated a gait dataset containing 25 join functions of each DoF for each gait class (4 crouched and normal). The algorithms that we evaluated for classification were: K-nearest neighbors (kNN), Naive Bayes (NB), discriminant analysis (DA), decision trees (DT), and an artificial neural network (ANN). We calculated the metrics: accuracy (Acc), recall (R), specificity (SP), precision (P) and the F-measure (FM) to asses the classification performance. In general, for this work, the best algorithms were discriminant analysis and artificial neural networks. The main results of the proposed recognition framework provide evidence that can be used in real clinical settings to diagnose and make decisions about treatments related to crouch gait diseases.

This study describes the development of an optical-based surface plasmon resonance (SPR) aptasensor for the detection of cocaine. The aptasensor was prepared by first attaching gold nanoparticles to a clean SPR chip surface, followed by the addition of an aptamer to create a modified surface. This surface was characterized using Contact Angle and Atomic Force Microscopy, revealing surface roughness values of 0.28 nm and 28.12 nm for the blank and modified surfaces, respectively. The detection of cocaine was carried out in the concentration range of 1 ng/mL to 1000 ng/mL, with a detection time of approximately 8 minutes and a cocaine limit of detection (LOD) of 0.43 ng/mL. Repeatability studies were conducted, and the stability of the signal response was examined at a concentration of 200 ng/mL. Adsorption isotherm models, including Scatchard, Langmuir, and Freundlich, were calculated to assess the surface homogeneity of the SPR aptasensor chip, with the results indicating compatibility with the Langmuir isotherm model.

Biometric fingerprint identification hinges on the reliability of its sensors, however, calibrating and standardizing these sensors poses significant challenges, particularly in regard to repeatability and data diversity. To tackle these issues, we propose methodologies for fabricating synthetic 3D fingerprint targets, or phantoms, that closely emulate real human fingerprints. These phantoms enable the precise evaluation and validation of fingerprint sensors under controlled and repeatable conditions. Our research employs laser engraving, 3D printing, and CNC machining techniques, utilizing different materials. We assess the phantoms' fidelity to synthetic fingerprint patterns, intra-class variability, and interoperability across different manufacturing methods. The findings demonstrate that a combination of laser engraving or CNC machining with silicone casting produces finger-like shaped phantoms with high accuracy and consistency for rolled fingerprint recordings. For slap recordings, direct laser engraving of flat silicone targets excels and in the contactless fingerprint sensor setting, 3D printing and silicone filling provides the most favorable attributes. Our work enables a comprehensive, method-independent comparison of various fabrication methodologies, offering a unique perspective on the strengths and weaknesses of each approach. This facilitates a broader understanding of fingerprint recognition system validation and performance assessment.

Meloidogyne nematodes, commonly known as root-knot nematodes, pose a considerable threat to crop yields, resulting in significant economic losses due to their intricate biology and limited control methods. In line with the European Union's focus on promoting organic farming and soil health to encourage sustainable agricultural practices, this study explores the efficacy of two characterized bacterial communities obtained from compost, namely SynCom1 and SynCom2, against Meloidogyne javanica in tomato plants. Through pot experiments, it is demonstrated that both bacterial communities effectively suppress nematode reproduction and root infections while simultaneously enhancing various growth parameters in tomatoes. These findings underscore the potential of synthetic bacterial communities as promising tools for organic or integrated pest management, thereby supporting sustainable agricultural practices and contributing to improved crop yields.

The possibility of abrupt transitions threatens to poise ecosystems into irreversibly degraded states. Recently, it has been proposed the use of engineered microbiomes in endangered ecosystems to prevent them to cross tipping points and avoid collapse. Potential targets for such interventions include some of the most prominent life-support systems in the biosphere: drylands and coral reefs. Since engineering can require the introduction of microorganisms not present in resident communities, how can we weight the potential outcomes? One way is to use general models of species interactions where the "synthetic" strain is incorporated into a standard multispecies model. Here we follow this approach by modelling a resource-consumer community where one of the species is a modified one that acts by preserving some key resource. We show how the indirect effect of damping the decay of shared resources results in biodiversity increase, and last but not less, the successful incorporation of the synthetic within the ecological network. Further extensions and implications for future restoration and terraformation strategies are discussed.

Cryptococcus neoformans is a human multidrug-resistant yeast with high mortality rates in immunocompromised patients. Recently, the synthetic peptide Mo-CBP3-PepII emerged as a potent anticryptococcal molecule with an MIC50 at low concentration. Here, the mechanisms of action of Mo-CBP3-PepII were deeply analyzed to provide new information about how it led C. neoformans cells to death. Light and fluorescence microscopies, analysis of enzymatic activities, and proteomic analysis were employed to understand the effect of Mo-CBP3-PepII on C. neoformans cells. Light and fluorescence microscopies revealed Mo-CBP3-PepII induced the accumulation of anion superoxide and hydrogen peroxide in C. neoformans cells. In addition to a reduction in the activity of superoxide dismutase (SOD), ascorbate peroxidase (APX), and catalase (CAT) in the cells treated with Mo-CBP3-PepII. In the presence of Ascorbic acid (AsA), no ROS were detected and Mo-CBP3-PepII lost the inhibitory activity against C. neoformans. Yet, Mo-CBP3-PepII inhibited the activity of lactate dehydrogenase (LDH), ergosterol biosynthesis, and induced the decoupling of cytochrome c from the mitochondrial membrane. Proteomic analysis revealed a reduction in the abundance of proteins related to energetic metabolism, DNA and RNA metabolism, pathogenicity, protein metabolism, cytoskeleton, and cell wall organization and division. Our findings indicated that Mo-CBP3-PepII might have multiple mechanisms of action against C. neoformans cells, mitigating the development of resistance and thus being a potent molecule to be employed in the production of new drugs against C. neoformans infections.

Nervous necrosis virus (NNV) has spread throughout the world, affecting more than 120 freshwater and marine fish species. While vaccination effectively prevents disease outbreaks, the difficulty of producing sufficient viruses using cell lines continues to be a significant disadvantage for producing inactivated vaccines. This study, therefore, explored the application of synthetic peptides as potential vaccine candidates for the prevention of NNV in Asian seabass (Lates calcarifer). Using the epitope prediction tool and molecular docking, three predicted immunogenic B cell epitopes (30-32 aa) derived from NNV coat protein were selected and synthesised, corresponding to amino acid positions 5 to 34 (P1), 133 to 162 (P2) and 181 to 212 (P3). All the predicted peptides interact with Asian sea bass’s MHC class II by docking. The antigenicity of these peptides was determined through ELISA and all peptides were able to react with NNV-specific antibodies. Subsequently, the immunogenicity of these synthetic peptides was investigated by immunisation of Asian seabass with individual peptides (30 μg/fish) and a peptide cocktail (P1+P2+P3, 10 μg each/fish) by intraperitoneal injection, followed by a booster dose at day 28 post-primary immunisation. There was a subset of immunised fish that were able to induce upregulation of CD4 in the head kidney and spleen. Importantly, antibodies derived from fish immunised with synthetic peptides reacted with whole NNV virions. Taken together, these findings indicate that synthetic linear peptides based on predicted B cell epitopes exhibited both antigenic and immunogenic properties, suggesting that they could be potential vaccine candidates for the prevention of NNV in fish.

Non-homologous end-joining (NHEJ) is a major DNA repair pathway in mammalian cells that recognizes, processes and fixes DNA damages throughout the cell cycle, and is specifically important for homeostasis of post-mitotic neurons and developing lymphocytes. Neuronal apoptosis increases in the mice lacking NHEJ factors Ku70 and Ku80. Inactivation of other NHEJ genes, either Xrcc4 or Lig4, leads to massive neuronal apoptosis in the central nervous system (CNS) that correlates with embryonic lethality in mice. Inactivation of either Paxx, Mri or Dna-pkcs NHEJ gene results in normal CNS development due to compensatory effects of Xlf. Combined inactivation of Xlf/Paxx, Xlf/Mri and Xlf/Dna-pkcs, however, results in late embryonic lethality and high levels of apoptosis in CNS. To determine the impact of NHEJ factors on early stages of neurodevelopment, we isolated neural stem and progenitor cells from mouse embryos and investigated proliferation, self-renewal and differentiation capacity of these cells lacking either Xlf, Paxx, Dna-pkcs, Xlf/Paxx or Xlf/Dna-pkcs. We found that XLF, DNA-PKcs and PAXX maintain the neural stem and progenitor cell populations and neurodevelopment in mammals, which is particularly evident in the double knockout models.

The Wave Mode (WM) is a unique imaging mode of spaceborne synthetic aperture radar (SAR), which is dedicatedly designed for global ocean surface wave observations. Since it was firstly achieved in the ERS-1/SAR satellite starting from 1991, the WM data over global oceans have been continuously acquired by the ESA’s SAR instruments onboard the satellites of ERS-2 (1997 – 2011), ENVISAT (2002 – 2012), Sentinel-1A(2014--)/1B(2016--) and the Chinese GaoFen-3 SAR (2016--), for nearly 30 years. Therefore, spaceborne SAR WM data have been a ‘big data’, which however, has not been widely exploited for global ocean wave measurements. In this study, we demonstrate its application on global ocean wave measurements based on the ten-year Advanced SAR (ASAR) WM data.

Nowadays, we can observe a worldwide trend towards the development of synthetic biomaterials. Numerous researches have been carried out in order to better understand the cellular behavior involved in the inflammation and bone healing processes related to living tissues. The aim of this study is to evaluate the tissue behavior of two different types of biomaterials: synthetic nano-hydroxyapatite / beta-tricalcium phosphate and hydroxyapatite in non-critical bone defects in rat calvaria. Twenty four rats underwent surgery in which two 3 mm defects in each cavity were performed. The rats were divided into 2 groups: Group 1, using xenogen hydroxyapatite (Bio oss ™); Group 2, using synthetic nano-hydroxyapatite / beta-tricalcium phosphate (Blue Bone ™). Sixty days after the surgery, the calvaria bone defect was filled with biomaterial, the animals were sacrificed and marked with Masson's trichrome and PAS staining, and immunohistochemistry (TNF-α, MMP-9) and electron microscopy analyzes were performed. Histomorphometric analysis indicates a greater presence in the protein matrix in Group 2, in addition to higher levels of TNF-α, MMP-9. The ultrastructural analysis shows an association of material with fibroblasts in the tissue regeneration stage. Paired statistical data indicates that Blue Bone ™ can improve bone formation / remodeling when compared to biomaterials of xenogenous origin.

In this paper, we focus on developing a novel method to extract sea ice cover (i.e., discrimination/classification of sea ice and open water) using Sentinel-1 (S1) cross-polarization (vertical-horizontal, VH or horizontal-vertical, HV) data in extra wide (EW) swath mode based on the machine learning algorithm support vector machine (SVM). The classification basis includes the S1 radar backscatter coefficients and texture features that are calculated from S1 data using the gray level co-occurrence matrix (GLCM). Different from previous methods where appropriate samples are manually selected to train the SVM to classify sea ice and open water, we proposed a method of unsupervised generation of the training samples based on two GLCM texture features, i.e. entropy and homogeneity, that have contrasting characteristics on sea ice and open water. We eliminate the most uncertainty of selecting training samples in machine learning and achieve automatic classification of sea ice and open water by using S1 EW data. The comparison shows good agreement between the SAR-derived sea ice cover using the proposed method and a visual inspection, of which the accuracy reaches approximately 90% - 95% based on a few cases. Besides this, compared with the analyzed sea ice cover data Ice Mapping System (IMS) based on 728 S1 EW images, the accuracy of extracted sea ice cover by using S1 data is more than 80%.

Synthetic biology (SynBio) is an interdisciplinary field that has developed rapidly in the last two decades. It involves the design and construction of new biological systems and processes from standardized biological components, networks and synthetic pathways. The goal of Synbio is to create logical forms of cellular control. Biological systems and their parts can be re-designed to carry out completely new functions. SynBio is poised to greatly impact human health, environment, biofuels and chemical production with huge economic benefits. SynBio presents opportunities for the highly agro-based African economies to overcome setbacks that threaten food security: The setbacks are brought about by climate change, land degradation, over-reliance on food imports, global competition, and water and energy security issues among others. With appropriate regulatory frameworks and systems in place, the benefits of harnessing SynBio to boost development in African economies by far potentially outweigh the risks. Countries that are already using GMOs such as South Africa and Kenya should find the application of SynBio seamless, as it would be a matter of expanding the already existing regulations and policies for GMO use.

ABSTRACT Surfactants are a broad category of tensio-active biomolecules with multifunctional properties applications in diverse industrial sectors and processes. Surfactants are produced synthetically and biologically. The biologically derived surfactants (biosurfactants) are produced from microorganisms with Pseudomonas aeruginosa, Bacillus subtilis Candida albicans and Acinetobacter calcoaceticus as dominant species. Rhamnolipids, sophorolipids, mannosylerithritol lipids, surfactin, and emulsan are well known in terms of their biotechnological applications. Biosurfactants can compete with the synthetic surfactants in terms of performance with established advantages over the synthetic ones including eco-friendliness, biodegradability, low toxicity, and stability over a wide variability of environmental factors. However, at present, the synthetic surfactants are a preferred option in different industrial applications, because of their availability in commercial quantities, unlike the biosurfactants. Usage of synthetic surfactants introduce new species of recalcitrant pollutants to the environment and lead to undesired results where a wrong selection of surfactants is made. Substituting synthetic surfactants with biosurfactants resolves these drawbacks, thus, interest has been intensified in biosurfactant applications in a wide range of industries hitherto considered as experimental fields. This review, therefore, intends to offer an overview of diverse applications where biosurfactants have found useful, with emphases in petroleum biotechnology, environmental remediation and in the agriculture sector. Application of biosurfactant in these settings would lead to industrial growth and environmental sustainability.

In (Venetz et al., 2019), authors rebuilt the essential genome of Caulobacter crescentus through the process of chemical synthesis rewriting and studied the genetic information content at the level of its essential genes. Then, they reduced the native Caulobacter crescentus native Caulobacter NA1000 genome sequence real genome ( 4042929 bp ) to the 785,701-bp reduced synthetic genome. Here we demonstrate the existence of a palindromic-like mirror structure that exists in real genomes and disappears totally in the synthetic genome. This biomathematic meta-organization is based on characteristic proportions of Fibonacci numbers between DNA single strand nucleotides proportions TC / AG on the one hand and TG / AC on the other hand. In both cases, we suggest that this meta-structure enhances the three-dimensional cohesion of the two DNA strands of the genome. We then generalize this study to the different synthetic genomes and synthetic cells published by the Craig Venter Institute on Mycoplasma Mycoides JCVI-syn1.0 (in 2010), JCVI-syn3.0 (in 2016) and JCVI-syn3A (in 2019). Finally, in the discussion section, we extend this study to synthetic genomes of E-Coli and Yeast chromosome XII.

This paper presents a concise exploration of the synthetic biology currently to artificially 1 create life, juxtaposed against natural life’s emergence over Earth’s 4.5-billion-year history. It explores 2 the complexities of life’s origins, sustaining factors, and the consequences of synthetic life creation, 3 addressing key scientific milestones such as the Urey-Miller experiment and Jacques Monod’s pro- 4 posals. The narrative navigates through the roles of energy, Maxwell’s demons, bifurcations, and 5 genetic information in the emergence and evolution of complex biological systems. Despite significant 6 strides in genetic engineering, the challenge of creating life from scratch persists, necessitating a deep 7 understanding of diverse scientific disciplines. While synthetic biology holds promise for medicine 8 and biotechnology, the creation of truly autonomous synthetic life forms raises ethical concerns. The 9 paper also stresses the imperative for careful ethical evaluation of the societal and environmental 10 implications arising from these advancements.

Anomaly detection is crucial in large-scale industrial manufacturing as it helps detect and localise defective parts. Pre-training feature extractors on large-scale datasets is a popular approach for this task. Stringent data security, privacy regulations, high costs and acquisition time hinder the development of large-scale datasets for training and benchmarking. Despite recent work focusing primarily on the development of new anomaly detection methods based on such extractors, not much attention has been paid to the importance of the data used for pre-training. This study compares representative models pre-trained with fractal images against those pre-trained with ImageNet, without subsequent task-specific fine-tuning. We evaluated the performance of eleven state-of-the-art methods on MVTecAD, MVTec LOCO AD, and VisA, well-known benchmark datasets inspired by real-world industrial inspection scenarios. Further, we propose a novel method to create a dataset by combining the dynamically generated fractal images creating a ``Multi-Formula'' dataset. Even though pre-training with ImageNet leads to better results, fractals can achieve close performance to ImageNet under proper parametrisation. This opens up the possibility for a new research direction where feature extractors could be trained on synthetically generated abstract datasets mitigating the ever-increasing demand for data in machine learning while circumventing privacy and security concerns.

Organisms from the genus Streptomyces feature actinobacteria with complex developmental cycle and great ability to produce a variety of natural products, which is possible due to complicated crosstalk between primary and secondary metabolism. These soil bacteria produce more than 2/3 of antibiotics used in medicine, and a large variety of bioactive compounds for industry and agricultural use. Although Streptomyces spp. have been studied for decades, the engineering of these bacteria remains challenging, and available genetic tools rather limited. Recent advancements in genetic manipulation of Streptomyces involving proposal of CRISPR/Cas9-based workflows as well as synthetic components (e.g. promoters, ribosome-binding sites, terminators, reporter genes) allowed to facilitate the turnaround time of strain engineering, but still has strain-specific limitations. However, a new perspective offered by synthetic biology to exploit the potential of existing and novel pathways in primary and secondary metabolism allows combining of different biosynthetic steps originating from diverse bacteria using a limited toolbox. Manipulation of interplay between primary and secondary metabolism proposes strategies to overcome strain-specific difficulties in engineering, leveraging insights in Streptomyces-specific physiological features. In this review, developments of these approaches for Streptomyces engineering are discussed and an overview of the synthetic biology developments is provided.

Plastics are very versatile materials that have contributed to the development of society since the 19th century, however, their mismanagement has led to an accumulation of waste in almost every ecosystem affecting the fauna of the planet. In this way recently, studies have shown that some insects might be able to adapt, consuming a wide range of hydrocarbon base polymers. In this work it was studied the adaptive capacity of Zophobas morio larvae when feeding on different synthetic polymers derived from petroleum. Four 30-day larval feeding treatments were carried out with synthetic polymers as expanded polystyrene (PS), low density polyethylene (PBD), polyisoprene (PI) and butyl rubber (BT), in addition a positive control of organic diet was included. Intestinal bacteria were isolated from the treatments and identified by Sanger sequencing. To analyze the chemical composition and physical form of the frass produced, fourier transform infrared spectroscopy (FITR) and images of the feces surface were taken with scanning electron microscopy (SEM) respectively. Zophobas morio larvae were able to consume 54% of PS in 30 days, equivalent to 3.2 mg/d/larva. Nine bacterial strains associated with the decomposition of synthetic polymers were identified in the intestine of the larvae. As for the physicochemical analysis of the feces, FTIR spectra showed the scission of bands corresponding to functional groups of the synthetic polymers in the comparison of the plastic diet treatments versus the feces of antibiotic-treated and plastic-fed larvae, while the comparison of spectra of the plastic and control treatments also identified differences in the absorption peaks. SEM imaging demonstrated that superworm feces differed in dependence on the substrate consumed. The findings demonstrate that Zophobas morio larvae possess a gut biological complex that allows them to feed and survive by consuming various petroleum-derived polymers.

This study develops a structure for mapping native vegetation in a transition area between Brazilian Cerrado and Atlantic Forest from integrated spatial information from the Sentinel-1 and Sentinel-2 satellites. Most studies use this data separately, however, the integrated use of optical sensors with Synthetic Aperture Radar (SAR) sensors can improve the methodology for classifying land use and land cover (LULC). The fusion of Sentinel-1 and Sentinel-2, for example, can increase the accuracy of mapping algorithms, using complementary information, such as spectral, backscattering, polarimetry, and interferometry. The study area comprises the Lobo Reservoir Hydrographic Basin, which is part of an environmental conservation unit protected by Brazilian law and with significant human development. LULC were classified, using the random forest deep learning algorithm. The classifying attributes were backscatter coefficients, polarimetric decomposition, and interferometric coherence for radar data (Sentinel-1), and optical spectral data, comprising bands in the red edge, near infrared, and shortwave infrared (Sentinel-2). The attributes were evaluated in three settings in which the SAR and optical data were evaluated separately (C1 and C2, respectively) and in an integrated manner (C3). The study found greater accuracy for C3 (96.54%), an improvement of nearly 2% compared to C2 (94.78%) and more than 40% in relation to C1 (55.73%). The classification algorithm encountered significant challenges in identifying wetlandsin C1, but performance improved in C3, enhancing differentiation by stratifying a greater number of classes during training and facilitating visual interpretation during sampling. Accordingly, the use of SAR and optical data becomes an alternative to optimize LULC mapping in tropical regions, due to the limited influence of atmosphere on images in the microwave range.

The proposed method deals with the problem of data privacy and sharing when processing personal mobility tracking data. Previous methods concentrate on producing highly detailed data on short-term and restricted areas, e.g. for autonomous driving scenarios. Another possibility consists of city-wide scales and beyond, that are used to predict general traffic flows. The presented approach takes the tracked mobility behavior of individuals to create coherent new mobility data that reflects the long-term mobility behavior of the person, guaranteeing location persistency and sound embedding within the point-of-interest structure of the observed area. After an analysis and clustering step with the original data, the area is distributed into a geospatial grid structure (H3 is used here), and the neighborhood relationships between the grids are interpreted as a graph. A feed-forward-autoencoder and a graph encoding-decoding network generate a latent space representation of the area. The original clustered data is associated with their respective H3 grids. With a greedy algorithm approach and concerning privacy strategies, new combinations of grids are top-level patterns for individual mobility behavior. Concrete locations are found and connected within the grids based on the original data. The described method is then applied to a study with 1000 participants from the city of Munich in Germany, and the results are described, showing the application of the approach in generating synthetic data, enabling further research on individual mobility behavior and patterns. The result is a sharable dataset on the same abstraction level as the input data, which makes it interesting, particularly for machine learning applications.

Using the phenomenon of transpiration, plants are able to raise soil water to a height of about 100 meters. According to the Cohesion - Tension theory, water moves through the capillaries of plant along a gradient of negative water potential in a single unified flow along a single route from roots to leaves, entering on its way into living cells for their nutrition and evaporating into the atmosphere in significant amounts in the leaves. The paper shows that in a case of artificial transpiration devices (ATD), the flow of rising water can be divided into two streams - the transpiration stream and the passive water stream - and as a result, such devices become capable of raising water to any given height. As proof, the working variant of two-stream ATD is proposed. The development of this ATD was carried out in two stages, discussed in details in the paper. At the first, experimental stage, a physical model was designed and manufactured, in which the flow of rising water was divided into two streams moving along two independent routes. The first route is used exclusively for the purpose of transpiration of water - transporting it into an artificial evaporator for complete evaporation into the atmosphere. The second route is used exclusively to transport passive water using the energy obtained in the first route during the process of transpiration. During many hours of testing, the physical model demonstrated a stable ability to bring masses of passive water, maintaining normal atmospheric pressure in them, to a small height, even in the extreme case not exceeding 10 meters. At the second, analytical stage, this two-stream model was developed into a two-stream multi-stage model, capable of raising water to any given height by choosing the number of stages. The number of stages can be very large, and portions of water can be delivered to any given height, remaining under normal atmospheric pressure. The conclusion part of the paper discusses the prospects of creating on the basis of the developed two-stream ATDs large systems that can, using the phenomenon of transpiration, become a sources of clean energy, similar to how it is realized in the mass of plants.

Additive manufacturing (AM) has revolutionized the field of biopolymers by providing a range of opportunities to create complex and intricate structures. Here we provide an overview of developments in biopolymer AM, first in the context of how natural systems have impacted the synthetic processes of AM, and secondly in the context of how synthetically derived structures can be used for biomedical applications. In particular, we explore the range of biopolymers developed for AM, AM techniques for biopolymers, and potential biocompatible medical applications with a focus on four categories of tissue in the human body: skin, bone, heart, and nerve. Despite the current challenges of the technology, exciting results in tissue regeneration, synthetic replacements for natural grafts, and complex dynamic organoids have already come to pass - with many more possible in the future.

In this work, backscattering signatures of snow-covered lake ice and sea ice from X- and Ku-band synthetic aperture radar (SAR) data are investigated. The SAR data were acquired with the ESA airborne SnowSAR sensor in winter 2012 over Lake Orajärvi in northern Finland and over landfast ice in the Bay of Bothnia of the Baltic Sea. Co-incident with the SnowSAR acquisitions in-situ snow and ice data were measured. In addition, time series of TerraSAR-X images and ice mass balance buoy data were acquired for the Lake Orajärvi in 2011-12. The main objective of our study was to investigate relationships between SAR backscattering signatures and snow depth over lake and sea ice, with the ultimate objective of assessing the feasibility of retrieval of snow characteristics using X- and Ku-band dual-polarisation (VV and VH) SAR over freshwater or sea ice. This study constitutes the first comprehensive survey of snow backscattering signatures at these two combined frequencies over both lake and sea ice. For lake ice, we show that X-band VH-polarized backscattering coefficient (σo) and the Ku-band VV/VH-ratio exhibited the highest sensitivity to the snow depth. For sea ice, the highest sensitivity to the snow depth was found from the Ku-band VV-polarised σo and the Ku-band VV/VH-ratio. However, the observed relations were relatively weak, indicating that at least for the prevailing snow conditions, obtaining reliable estimates of snow depth over lake and sea ice would be challenging using only X- and Ku-band backscattering information.

The conducted investigation encompassed the comprehensive integration of mechanical, envi-ronmental, chemical, and microstructural evaluations of a composite amalgamating sandy soil and a synthetic polymer at two distinct concentrations (2.5% and %) across multiple curing in-tervals (0, 1, 2, 4, 7, 15, 30, and 45 days). The studied soil originates from an environmentally sig-nificant protected area in Brazil. The implementation of mechanisms for soil improvement in the region must adhere to technical criteria without causing environmental harm. Direct shear testing was conducted, permeability was assessed, and microstructure analysis and XRD and XRF/EDX studies of both the soil and composites were conducted. It was observed that longer curing times yielded improved results in shear stress, friction angle, and cohesive intercept, with SP_5% exhibiting the highest values compared to the soil and SP_2.5%. Adding the polymeric so-lution to the soil contributed to cementation and cohesion gains in the substrate. Through mi-crostructural characterization, the polymer's role as a cementing agent for the grains is evident, forming a film on the grains and binding them together. Based on the analyses and studies con-ducted in the research, it can be concluded that there is technical feasibility for applying the pol-ymeric solution at both dosages in geotechnical projects.

The idea that the Earth system self-regulates in a habitable state was proposed in the 1970s by James Lovelock, who conjectured that life plays a self-regulatory role on a planetary-level scale. A formal approach to such hypothesis was presented afterwards under a toy model known as the Daisyworld. The model showed how such life-geosphere homeostasis was an emergent property of the system, where two species with different properties adjusted their populations to the changing external environment. So far, this ideal world exists only as a mathematical or computational construct, but it would be desirable to have a real, biological implementation of Lovelock's picture beyond our one Biosphere. Inspired in the exploration of synthetic ecosystems using genetic engineering and recent cell factory designs, here we propose such a living, microbial Daisyworld. This is based on a synthetic microbial ecosystem using pH as the external, abiotic control parameter. Several case studies are considering, including two, three and multiple species assemblies. Despite that oscillatory dynamics and chaos emerge in the latter case, it is shown that global regulation is also achieved in most cases as species diversity increases. The alternative implementations and their implications of this model in other synthetic biology scenarios, including ecosystem engineering, are outlined.

Natural fibers have been widely used as a reinforcing material for the construction of drones. The main goal of this review is to identify a biodegradable natural fiber material that can be built for Unmanned Aerial Vehicles (UAVs). The review shows that natural fibers such as kenaf and PALF can be used as an alternative composite material, particularly for multifunctional applications where their smaller weight and less expensive characteristics make them incredibly realistic. This review also discusses the mechanical properties, advantages and disadvantages, and fabrication of the composites.

Anatomical airways parameters as length, diameter and angles have a strong effect on the flow dynamics. Aiming to explore the effect of variations of the bifurcation angle (BA) and carina rounding radius (CRR) of lower human airways on the respiratory processes, numerical simulations of airflow during inhalation and exhalation were performed using a synthetic bifurcation models. Geometries for the airways models were parameterized based on a set of different BA's and several CRR's. A range of Reynolds numbers (\Reyn) relevant to the human breathing process were selected to analyzed the airflow behaviour. The numerical results show a significant influence of BA and the CRR on the development of the airflow within the airways, and therefore affecting some relevant features of the flow, namely the deformation of velocity profiles, alterations of pressure drop, the flow patterns, and finally enhance or attenuation of wall shear stresses (WSS) appearing during the regular respiratory process. Numerical results show that increases in the bifurcation angle value are accompanied by pressure increases of about 20\%, especially in the regions close to the bifurcation. Similarly, increases in the BA value lead to a reduction in peak shear stresses of up to 70\%. For the ranges of angles and radii explored, an increase in pressure of about 20\% and a reduction in wall shear stress of more than 400\% were obtained by increasing the carina rounding radius. Analysis of the coherent structures and secondary flow patterns also revealed a direct relationship between the location of the vortical structures, the local maxima of the velocity profiles and the local vorticity minima. This relationship was observed for all branches analysed, for both the inhalation and exhalation processes of the respiratory cycle.

Recently, deep learning-based image quality enhancement models have been proposed to improve the perceptual quality of distorted synthesized views impaired by compression and Depth Image Based Rendering (DIBR) process in multiview video systems. However, due to the lack of multi-view video plus depth data, the training data for quality enhancement models is small, which limits the performance and progress of these models. Augmenting the training data to enhance the Synthesized View Quality Enhancement (SVQE) models is a feasible solution. In this paper, we suggest a deep learning-based SVQE model using more synthetic Synthesized View Images (SVIs). To simulate the irregular geometric displacement of DIBR distortion, a random irregular polygon-based SVI synthesis method is proposed based on existing massive RGB/RGBD data, and a synthetic synthesized view database is constructed, which includes synthetic SVIs and DIBR distortion masks. Moreover, to further guide the SVQE models to focus more precisely on DIBR distortion, the DIBR distortion mask prediction network which could predict the position and variance of DIBR distortion is embedded into the SVQE models. The experimental results demonstrate that by pretraining on the synthetic SVI database, the performance of the existing SVQE models could be greatly promoted. In addition, by introducing the DIBR distortion mask prediction network, the SVI quality could be further enhanced.

The classification of vessel types in SAR imagery is of crucial importance for maritime applications. However, the ability to use real SAR imagery for deep learning classification is limited, due to the general lack of such data and/or the labor-intensive nature of labeling them. Simulating SAR images can overcome these limitations, allowing the generation of an infinite number of datasets. In this contribution, we present a synthetic SAR imagery dataset with ship wakes, which comprises 46080 images for ten different real vessel models. The variety of simulation parameters includes 16 ship heading directions, 6 ship velocities, 8 wind directions, 2 wind velocities, and 3 incidence angles. In addition, we extensively investigate classification performance for noise-free, noisy, and denoised ship wake scenes. We utilize the standard AlexNet architecture and employ training from scratch. To achieve the best classification performance, we conduct Bayesian optimization to determine hyperparameters. Results demonstrate that the classification of vessel types based on their SAR signatures is highly efficient, with maximum accuracies of 96.16%, 92.7%, and 93.59%, when training using noise-free, noisy, and denoised datasets respectively. Thus, we conclude that the best strategy in practical applications should be to train convolutional neural networks on denoised SAR datasets. The results show that the versatility of the SAR simulator can open up new horizons in the application of machine learning to a variety of SAR platforms.

As synthetic/artificial life forms become more abundant and sophisticated, an increasing number of bizarre creatures - xenobots, robots, soft A-life entities, genetically engineered organisms, etc. - are invading our society. Therefore, we need to bring order to all this, to establish what is living and what is not. Here, I intend to classify all these non-natural entities and clarify their status with reference to their consideration or not as living beings, leaving the door open to an uncertain future in which perhaps we can see how "the artificial" and "the natural" merge to originate something new. To order all this "new biodiversity" and to also give entry to viruses (which are excluded of the three-domains tree of life), I propose the creation of a new domain, Lithbea (from the name: life-in-the-border entities), in which all these new human-made entities as well as the viruses will be included. Within this domain there would be two kingdoms, Virus and Humade (contraction of human-made), based on their origin, natural or human-made. A brief description of each component of Lithbea is included and the implications for society and biology of this “new biodiversity” is briefly discussed.

Increasing environmental concern and consumer demand for natural, sustainable and eco-friendly products have prompted the replacement of synthetic surfactants with their natural plant-based alternatives. Saponins are the plant based natural surfactants characterized by their foam forming properties in aqueous solution. Their natural origin makes them eco-friendly, bio-degradable and non-toxic. Further, they possess better physicochemical properties than the syn-thetic ones. They are also reported to exhibit a lot of useful biological activities such as anti-cancer, antifungal, anti-inflammatory, antimicrobial, antioxidant and cholesterol-lowering properties. Because of their excellent surface activity, biological activities and wide distribution in nature, saponin rich plants deserve deeper insight as a sustainable source of natural surfactants as they possess the potential to replace toxic synthetic surfactants abundant today. This review article is intended to provide a brief overview on the saponins with a special notion on their surface-active properties. It encourages further studies on development of commercial formulations based on saponins for the complete replacement of the synthetic counter parts, making better use of plants sources thereby contributing to global agenda of green environment.

Phase synchronization is one of the key issues that must be addressed in the bistatic synthetic aperture radar (BiSAR) system. LuTan-1 is an innovative L-band spaceborne BiSAR mission of China. An advanced synchronization scheme is used in the LuTan-1 system. The synchronization pulses are exchanged immediately after the ending time of the radar echo receiving window and before the starting time of the next pulse repetition interval. Therefore, it can not interrupt the normal SAR data acquisition, further improving synchronization frequency and avoiding the data missing effect. In order to accurately monitor system malfunctions and compensate for the phase synchronization errors introduced by hardware system, an innovative internal calibration strategy is designed and employed in the LuTan-1 mission. The test data acquired from the ground validation system of LuTan-1 are used to demonstrate the feasibility of the proposed scheme. The results validate the effectiveness of the proposed scheme and prove the promise for its future application in LuTan-1.

In this paper, we presented a method of retrieving sea surface wind speed from Sentinel-1 synthetic aperture radar (SAR) horizontal-horizontal (HH) polarization data in extra-wide mode, which have been extensively acquired over the Arctic for sea ice monitoring. In contrast to the conventional algorithm, i.e., using a geophysical model function (GMF) to retrieve sea surface wind by spaceborne SAR, we introduced an alternative method based on physical model guided neural network. Parameters of SAR normalized radar cross section, incidence angle, and wind direction are used as the inputs of the backward propagation (BP) neural network, and the output is the sea surface wind speed. The network is developed based on more than 11,000 HH-polarized EW images acquired in the marginal ice zone (MIZ) of the Arctic and their collocations with scatterometer measurements. Verification of the neural network based on the testing dataset yields a bias of 0.23 m/s and a root mean square error (RMSE) of 1.25 m/s compared to the scatterometer wind speed. Further comparison of the SAR retrieved sea surface wind speed with independent buoy measurements shows a bias and RMSE of 0.12 m/s and 1.42 m/s, respectively. We also analyzed the uncertainty of retrieval when the wind direction data of a reanalysis model are used as inputs to the neural network. By combining the detected sea ice cover information based on the EW data, one can expect to derive simultaneously sea ice and marine-meteorological parameters by spaceborne SAR in a high spatial resolution in the Arctic.

This dataset consists of integral sea state parameters of significant wave height (SWH) and mean wave period (zero-upcrossing mean wave period, MWP) data derived from the advanced synthetic aperture radar (ASAR) onboard the ENVISAT satellite over its full life cycle (2002-2012) covering the global ocean. Both parameters are calibrated and validated against buoy data. A cross-validation between the ASAR SWH and radar altimeter (RA) data is also performed to ensure that the SAR-derived wave height data are of the same quality as the RA data. These data are stored in the standard NetCDF format, which are produced for each ASAR wave mode Level1B data provided by the European Space Agency. This is the first time that a full sea state product in terms of both the SWH and MWP has been derived from spaceborne SAR data over the global ocean for a decadal temporal scale.

Robots for communication are developed extensively with emphasis on sympathy. This study deals with the growth of character and the control of its operation accordingly. The child has time to be alone with the nature of his/her robot friend. The child can interact with other people's emotional expressions through a robot. Step by step, the robot character will grow as the child grows. Through design studies, qualitative processes such as {customer experience audit, eye tracking, mental model diagrams, semantic differences} have been executed for the results. The participatory behavior research approach through user travel is mapped from the user's lead to the evidence-based design. This research considers how the synthetic characteristics can be applied to the physical growth of robot toys through the product design process. With the development of robot toy "Buddy", we tried making two variations on the robot to achieve recognizable growth. (1) A one-dimensional height scaling and (2) facial expression including the distance between two eyes on the screen. Observations represented children's reactions when "Buddy" was released to with the children. As an independent synthetic character, the robot was recognized by children who had the designed function. Robots for training may require more experimentation.

Improvements that can be attained in seasonal climate predictions in various parts of Africa using the multimodel supersensemble scheme are presented in this study. The synthetic superensemble (SSE) used follows the approach originally developed at Florida State University (FSU). The technique takes more advantage of the skill in the climate forecast data sets from atmosphere-ocean general circulation models running at many centres worldwide including the WMO global producing centers (GPCs). The module used in this work drew data sets from the Four versions of FSU coupled model system, seven models from the DEMETER project which is the forerun to the current European Ensembles Forecast System, the NCAR Model, and the Predictive Ocean Atmosphere Model for Australia (POAMA), all making a set of 13 individual models. An archive consisting of monthly simulations of precipitation was available over all the 5 regions of Africa, namely Eastern, Central, Northern, Southern, and Western Africa. The results showed that the SSE forecast for precipitation carries a higher skill compared to each of the member models and the ensemble mean. Relative to the ensemble mean (EM), the SSE provides an improvement of 18% in simulation of season cycle of precipitation climatology. In Eastern Africa, during December-February season, a north-south gradient of precipitation prevails between Tropical East Africa and the sector of the region towards Southern Africa. This regional scale climate pattern is a direct influence of the Intertropical Convergence Zone (ITZC) across the African continent during this time of the year. The SSE emerges with superior skill scores such as lowest root mean square error above the EM and the member models, for example in the prediction of spatial location and precipitation magnitudes that characterize the see-saw precipitation pattern in Eastern Africa. In all parts of Africa, and especially Eastern Africa where seasonal precipitation variability is a frequent cause huge human suffering in due to droughts and famine, the multimodel superensemble and its subsequent improvements will always provide a forecast that out weighs the best Atmosphere-Ocean Climate Model.

Satellite altimeters have been used to monitor river and reservoir water levels, from which water storage estimates can be derived. Inland water altimetry can therefore play an important role in continental water resource management. Traditionally, satellite altimeters were designed to monitor homogeneous surfaces such as oceans or ice sheets, resulting in a poor performance over small inland water bodies due to the contribution from land contamination in the returned waveforms. The advent of synthetic aperture radar (SAR) altimetry (with its improved along-track spatial resolution) has enabled the measurement of inland water levels with a better accuracy and an increased spatial resolution. This paper presents three specialized algorithms or retrackers to retrieve water levels from SAR altimeter data over inland water bodies dedicated to minimizing land contamination from the waveforms. The performances of the proposed waveform portion selection method with three retrackers, namely, the threshold retracker, Offset Centre of Gravity (OCOG) retracker and 2-step physical-based retracker, are compared. Time series of water levels are retrieved for water bodies in the Ebro River basin (Spain). The results show good agreement with in situ measurements from the Ebro Reservoir (width is approximately 1.8 km) and Ribarroja Reservoir (width is approximately 400 m) with un-biased root-mean-square errors (RMSEs) of approximately 0.28 m and 0.16 m, respectively. The performances of all three retrackers are also compared with the European Space Agency’s ocean retracker in the Sentinel-3 Level-2 product.

Possibilities of utilization of two frequencies synthetic aperture radar (SAR) operating simultaneously in P-band and S or L-band are considered. Advantages of such system are shown. They are caused by improvement of data interpretation and by decrease of ionosphere influence. Tasks of surface and subsurface sensing by the complex SAR were under investigation for vegetation, soil covers are given. As an example, the investigation results of coniferous forest areas backscattering by the spaceborne P-band SAR together with L-band SAR in the September-February period are presented. Studies have shown that the joint use of the results in L and P bands offer unique opportunities to explore the effects of changes in the backscattering properties of forest surfaces.

Background: Ovarian clear cell carcinoma (OCCC) is a type of ovarian cancer with a poor prognosis if detected in the progressive stage since there is less effective chemotherapy. Recent advancements in molecular-targeted drugs have not substantially affected OCCC treatment. Therefore, we explored the potential of targeting MDM2 in OCCC cells. Methods: We used TOV-21G and KOC7c cells as the ARID1A mutant-type, and RMG-I and ES2 cells as the ARID1A wild-type. Then, we performed small interfering library screening, Western blotting, real-time polymerase chain reaction analysis, cell proliferation assay, cell cycle analysis, time-lapse cell proliferation assessment, and DNA damage assessment. Next, to generate murine intraperitoneal tumors, 7.5 × 106 TOV-21G cells in 200 μL of phosphate-buffered saline were injected subcutaneously into the intraperitoneum in 5–6-week-old athymic nude mice. Results: Using various cell lines with ARID1A mutations or without mutation, the results showed that the interference of MDM2 effectively reduced cell proliferation in ARID1A-mutant cells but not in ARID1A wild-type cells. Additionally, interference with ARID1A against ARID1A wild strains reproduced susceptibility to MDM2 interference. In vivo experiments demonstrated that nutlin-3, an MDM2 inhibitor, significantly suppressed tumor growth in the ovarian cancer mouse model. Conclusion: These findings suggest that targeting MDM2 may be a viable strategy for the treat-ment of ARID1A-mutated OCCC, offering a new therapeutic approach for this challenging type of cancer.

Digital twin technology, a cutting-edge approach that creates dynamic digital replicas of physical systems, is increasingly integral to various industrial applications. However, the effective deployment of digital twins often faces challenges associated with data availability, quality, and interoperability, which can impede the development and operational efficacy of these virtual counterparts. This paper presents a systematic review of the application of artificial intelligence (AI) in enhancing and managing digital twin technologies across multiple domains such as industry, healthcare, urban planning, business, education, technology, and others. It specifically examines how machine learning models, particularly neural networks and deep generative models, are being employed to optimize the creation, maintenance, and functionality of digital twins. The review explores the role of artificial intelligence in overcoming data-related limitations by providing robust, scalable data solutions for digital twins. Additionally, it addresses critical considerations of real-time data processing and system interoperability within these applications. This survey not only identifies the prevailing challenges and opportunities within this emerging field but also highlights potential future research directions that could further the integration of AI with digital twin technology. Through a detailed exploration of the intersection between AI and digital twins, this paper aims to contribute significantly to the knowledge base and encourage further innovations in this interdisciplinary area.

Ichthyosis is a genetic skin disorder marked by hyperkeratosis, pruritus, and scaling. This case study explores a potential association between ichthyosis and scalp paresthesia, a symptom not commonly linked with this dermatological condition. In a longstanding history of ichthyosis patients, we detail the therapeutic use of fluocinolone, a synthetic corticosteroid, in managing scalp paresthesia. The effectiveness of fluocinolone in reducing paresthesia episodes underscores its potential as a critical component in the symptomatic treatment of this complex interplay between skin and neurological symptoms. This case prompts a broader discussion on the need for increased awareness and education among healthcare providers regarding the diverse manifestations of ichthyosis. Enhanced understanding and recognition of these associations can lead to improved patient counseling, tailored management strategies, and, ultimately, better quality of life for individuals affected by ichthyosis.

Multicellularity is one of the major evolutionary transitions, and its rise provided the ingredients for the emergence of a biosphere inhabited by complex organisms. Over the last decades, the potential for bioengineering multicellular systems has been instrumental in interrogating nature and exploring novel paths to regeneration and disease, as well as cognition and behaviour. Here, we provide a list of open problems that encapsulate many of the ongoing and future challenges in the field, and we suggest conceptual approaches that may facilitate progress.

Artificial intelligence (AI) has witnessed an exponential increase in its use in various applications. Recently, the academic community started to research and inject new AI-based approaches to provide solutions to traditional software engineering problems. However, a comprehensive and holistic understanding of the current status is missing. To close the above gap, synthetic knowledge synthesis was used to induce a research landscape of the contemporary research literature on the use of AI in software engineering. The synthesis resulted in 15 research categories and five themes, namely natural language processing in software engineering, use of artificial intelligence in the management of software development life cycle, use of machine learning in fault/defect prediction and effort estimation, employment of deep learning in intelligent software engineering and code management, and mining software repositories to improve software quality. The most productive country was China (n=2042), followed by the United States (n=1193), India (n=934), Germany (n=445), and Canada (n=381). A high percentage (n=47.4%) of papers were funded, showing a strong interest in this research topic. The convergence of AI and software engineering can significantly reduce needed resources, improve quality, increase user experience, and improve the well-being of software developers.

Synthetic cathinones, derived from cathinone found in the plant Catha edulis, represent the second-largest and most frequently seized group of new psychoactive substances. They are considered as β-keto analogs of amphetamine, sharing pharmacological effects with amphetamine and cocaine. This review describes the neurotoxic properties of synthetic cathinones, encompassing their capacity to induce neuroinflammation, dysregulate neurotransmitter systems, and alter in monoamine transporters and receptors. Additionally, it discusses the rewarding and abuse potential of synthetic cathinones drawing from findings obtained through various preclinical animal models, contextualized with other classical psychostimulants. The review also offers an overview of current abuse trends of synthetic cathinones on the illicit drug market, specifying the aspects covered, and underscores the risks they pose to public health.

Naturally-derived synthetic leather is a widely used and high-quality type of faux leather or synthetic leather. Many consumers prefer authentic leather goods due to their exceptional qualities, including high water vapor permeability and superior wearing comfort. Consequently, the exploration of artificial leather made from natural materials with exceptional qualities as an alternative to genuine leather has garnered significant interest and is now a highly studied subject. Synthetic leather, sometimes known as imitation leather, has gained popularity recently as a highly suitable alternative to genuine leather. Continuous advances in this area of research increase the range of uses for synthetic leather using natural fibers. Thus, this research aims to explore synthetic leather materials using orange peel waste, which can be applied to the fashion industry. This research applies several types of orange peel waste, such as Pomelo, Sweet orange, and Sunkist orange, to different compositions and strengthening materials, such as bandages and dacron. The resulting bio-composite materials' morphology, mechanics, and adhesive properties were evaluated following ASTM D 2209-00 and ASTM D 4533-04 standards. The results indicate that specimen 1A (Pomelo using bandage as reinforcement) has the most significant effects, with a tensile test value of approximately 472 N/cm2, an elongation of roughly 67.28 % was the highest value on sweet orange using bandage as reinforcement, and a tear resistance of around 14.28 N/cm2 for Pomelo with bandage as reinforcement. Furthermore, the test results also show that composition 2B still does not meet the standards of SNI 1294:2009 and ISO 3376 for tensile strength and ISO 3377-1 for tear strength. Additionally, statistical analysis showed no appreciable changes in the samples analyzed. Furthermore, statistical evaluations showed no significant alterations in the studied samples. The results of this experimental investigation can be explored further and used as a basic framework for the creation of bio-composites from orange peel waste for future fashion.

Historically the use of artificial intelligence (AI) in paediatrics dates back to 1984 with the intro-duction of a computer-assisted medical decision-making system called SHELP. Since then, research on the use of AI in pediatrics has become much more popular, and the number of reviewed publications largely increased. Consequently, a need for a holistic research landscape enabling researchers and other interested parties to gain insights into, deepen their knowledge about or inform them about the use of AI in pediatrics arised. To fill this gap a novel methodology named synthetic knowledge synthesis was applied. Using SKS we identified most prolific countries, in-stitutions, source titles, funding agencies, research themes, research gaps and hot spots.

The airborne and satellite-based synthetic aperture radar enables the acquisition of high-resolution SAR oceanographic images in which even the outlines of ships can be identified. The detection of ship targets from SAR images has a wide range of applications, such as the military, where the dynamic grasp of enemy targets can help improve the early warning capability of naval defence, and the civilian detection of illegal fishing vessels can help improve the level of maritime management. Due to the density of ships in SAR images, the extreme imbalance between foreground and background clutter, and the diversity of target sizes, achieving lightweight and highly accurate multi-scale ship target detection remains a great challenge. To this end, this paper proposes an attention mechanism for multiscale receptive fields convolution block (AMMRF). AMMRF not only makes full use of the location information of the feature map to accurately capture the regions in the feature map that are useful for detection results, but also effectively captures the relationship between the feature map channels, so as to better learn the relationship between the ship and the background. Based on this, a new YOLOv7-based ship target detection method, You Only Look Once SAR Ship Identification (YOLO-SARSI), is proposed, which acquires the abstract semantic information extracted from the high-level convolution while retaining the detailed semantic information extracted from the low-level convolution. Compared to the deep learning detection methods proposed by previous authors, our model is more lightweight, only 18.43M. We examined the effectiveness of our method on two SAR image public datasets: the High-Resolution SAR Images Dataset (HRSID) and the Large-Scale SAR Ship Detection Dataset-v1.0 (LS-SSDD-V1.0). The results show that the average accuracy AP50 of the detection method YOLO-SARSI proposed in this paper on the HRSID and LS-SSDD-V1.0 datasets is 4.9% and 5% higher than that of YOLOv7, respectively.

For Synthetic Aperture Radar (SAR) image registration, successive processes following feature extraction are required by both the traditional feature-based method and the deep learning method. Among these processes, the feature matching process—whose time and space complexity are related to the number of feature points extracted from sensed and reference images, as well as the dimension of feature descriptors—proves to be particularly time-consuming. Additionally, the successive processes introduce data sharing and memory occupancy issues, requiring an elaborate design to prevent memory leaks. To address these challenges, this paper introduces the OptionEM-based reinforcement learning framework to achieve end-to-end SAR image registration. This framework outputs registered images directly without requiring feature matching and calculation of the transformation matrix, leading to significant processing time savings. The Transformer architecture is employed to learn image features, while a correlation network is introduced to learn the correlation and transformation matrix between image pairs. Reinforcement learning, as a decision process, can dynamically correct errors, making it more efficient and robust compared to supervised learning mechanisms like deep learning. We present a hierarchical reinforcement learning framework combined with episodic memory to mitigate the inherent problem of invalid exploration in generalized reinforcement learning algorithms. This approach effectively combines coarse and fine registration, further enhancing training efficiency. Experiments conducted on three sets of SAR images, acquired by TerraSAR-X and Sentinel-1A, demonstrate that the proposed method’s average runtime is sub-second, achieving subpixel registration accuracy.

The Earth’s synthetic gravitational and density models can be used to validate numerical procedures applied for a global (or large-scale regional) gravimetric forward and inverse modelling. Since the Earth’s lithospheric structure is better constrained by tomographic surveys than a deep mantle, most of existing 3-D density models describe only a lithospheric density structure, while 1-D density models are typically used to describe a deep mantle density structure below the lithosphere-asthenosphere boundary. The accuracy of currently available lithospheric density models is examined in this study. The error analysis is established to assess the accuracy of modelling the sub-lithospheric mantle geoid, while focusing on the largest errors (according to our estimates) that are attributed to lithospheric thickness and lithospheric mantle density uncertainties. Since a forward modelling of the sub-lithospheric mantle geoid comprises also numerical procedures of adding and subtracting gravitational contributions of similar density structures, the error propagation is derived for actual rather than random errors (that are described by the Gauss’ error propagation law). Possible systematic errors then either lessen or sum up after applying particular corrections to a geoidal geometry that are attributed to individual lithospheric density structures (such as sediments) or density interfaces (such as a Moho density contrast). The analysis indicates that errors in modelling of the sub-lithospheric mantle geoid attributed to lithospheric thickness and lithospheric mantle density uncertainties could reach several hundreds of meters, particularly at locations with the largest lithospheric thickness under cratonic formations. This numerical finding is important for a calibration and further development of synthetic density models of which mass equals the Earth’s total mass (excluding the atmosphere). Consequently, the (long-to-medium wavelength) gravitational field generated by a synthetic density model should closely agree with the Earth’s gravitational field.

Continuous glucose monitoring devices allow diabetes condition management. However, when limited data is available, one option is to increase their size by generating synthetic samples. From a homemade wearable prototype was created a real dataset with 18 instances and 53 attributes that capture characteristics of capillary and venous blood glucose, oxygen concentration, pulse rate, skin temperature, and 24 modules and 24 phases related to bio-impedance. The objective of this article is to generate synthetic datasets, and also it investigates the ideal features subset and optimal model for non-invasive diabetes prediction. Gaussian-Copulas (GC), conditional generative adversarial networks (CG), variational autoencoders, and Copula-GAN techniques' were used to generate five synthetic datasets. Experiments show that GC1 and GC2 datasets follow min/max boundaries and are not copies of the original data. Multilayer perceptron regressor outperformed (train and test) with 2.17, 2.51 in MAE; 9.29, 13.59 in MSE; 3.05, 3.69 in RMSE, and 0.95, 0.92 in R2 in GC1, and 2.64, 3.02 in MAE; 11.43, 15.11 in MSE; 3.38, 3.89 in RMSE, and 0.94, 0.92 in R2 in GC2 with eight features. Future work is necessary to explore autoencoder and generative architectures, datasets with diverse characteristics, and the effect of the number of features.

Disinfection byproducts (DBPs) are formed whenever disinfectant ingredients are in contact with organic matter. Due to widespread increase in production and use of disinfectants and antiseptics, the presence of their components in coastal environments is increasing. However, very limited scientific literature is available in regard to the occurrence of DBPs and related compounds in the coastal zone and particularly in seawater. In this context, the aim of this preliminary compilation is to outline the main up-to-date findings and raise awareness on their increasing occurrence in coastal environments. Sampling and analysis of marine samples in the USA, Spain, China, Taiwan, Malaysia, Korea, Kuwait and Hong-Kong revealed the presence of several categories of DBPs and related compounds in coastal environments, with the highest levels being detected in urban areas, probably related to the nearby wastewater treatment plants. The investigations considered in this preliminary compilation, report the detection of DBPs and related compounds as well as the formation of toxic brominated and iodinated DBPs in high levels due to chlorination of wastewater, especially after use of seawater for flushing in toilets. New DBP groups have also been detected, namely halogenated phenolic DBPs and halopyrroles.

The objective of this study was to compare the effect of different botanical powders and synthetic chemical in controlling Sitophilus zeamais in stored maize. A laboratory experiment was done to assess three botanicals, Zingiber officinale, Moringa oleifera, Xylopia aethiopica, in controlling the S. zeamais. The results of this study demonstrated the active potentials of these plant products as plant-derived insecticides against maize weevil. The synthetic chemical used showed both higher weevil mortality and higher grain loss than the botanicals (P< 0.05). The Botanicals also showed significance difference in the mortality rate (P < 0.05) as Z. officinale recorded the highest mortality rate (5.66%) while X. aethiopica recorded the lowest mortality rate (3.66%). The control attained the highest grain damage (7.33%) while amongst the botanicals, the highest was found in Z. officinale (7.33%) and lowest was on M. oliefera (5.33%). The exit holes made by the weevils at the end of the experiment were highest (2.66) in M. oliefera whereas lowest was recorded on X. aethiopica (1.00). Z. officinale, X. aethiopica and M. oleifera were efficacious against S. zeamais instead of synthetic chemical insecticides that have environmental health hazards and they can be used in integrated pest management by farmers and foods merchants. Therefore, since these botanicals have no any adverse effects on the seeds and safe to the environment, they are recommended for future usage in storage grains to control of S. zeamais.

Cryptococcus neoformans is a multidrug-resistant human pathogenic yeast responsible for infections in immunocompromised patients. Here, Itraconazole (ITR), a commercial antifungal drug with low effectiveness against C. neoformans, was combined with different synthetic peptides Mo-CBP3-PepII, RcAlb-PepII, RcAlb-PepIII, PepGAT, and PepKAA. The mechanisms of action responsible for the synergistic effect were evaluated for the best combinations by Fluorescence Microscopy (FM). The synthetic peptides enhanced the activity of ITR by 10-fold against C. neoformans. Our results demonstrated that the combinations could induce pore formation in the membrane and overaccumulation of ROS on C. neoformans cells. Our findings indicate that our peptides successfully potentialize the activity of ITR by reducing it by 10-fold to reach antifungal activity against C. neoformans. Therefore, synthetic peptides are potential molecules to act as co-adjuvant agents in treating Cryptococcal infections.

Klebsiella pneumoniae is a multidrug-resistant opportunistic human pathogen related to various infections. As such, synthetic peptides have emerged as potential alternative molecules. Mo-CBP3-PepI has presented great activity against K. pneumoniae by presenting an MIC50 at a very low concentration (31.25 µg mL-1). Here, fluorescence microscopy and proteomic analysis revealed the alteration in cell membrane permeability, ROS overproduction, and protein profile of K. pneumoniae cells treated with Mo-CBP3-PepI. Mo-CBP3-PepI led to ROS overaccumulation and membrane pore formation in K. pneumoniae cells. Furthermore, the proteomic analysis highlighted changes in essential metabolic pathways. For example, after treatment of K. pneumoniae cells with Mo-CBP3-PepI, it was seen a reduction in the abundance of protein related to DNA and protein metabolism, cytoskeleton and cell wall organization, redox metabolism, regulation factors, ribosomal proteins, and resistance to antibiotics. These reductions lead to the inhibition of DNA repair, inhibition of cell wall turnover, protein turnover, and ROS accumulation leading to cell death. Our findings indicated that Mo-CBP3-PepI might have mechanisms of action against K. pneumoniae cells, mitigating the development of resistance and thus being a potent molecule to be employed in producing new drugs against K. pneumoniae infections.

Autofocus is an essential part of the SAR imaging process. Multi-subaperture autofocus algorithm is a commonly used autofocus algorithm for processing SAR stripmap mode data. The multi-subaperture autofocus algorithm has two main steps, the first is to estimate the phase error gradient within the subaperture, the second is to splice the phase error gradient, that is, to remove the shift amount between the estimated adjacent subapertures’ error gradients. Previous gradient-splicing algorithms assume that the estimation of subaperture error is accurate, but when the estimation of subaperture phase error gradients is not accurate enough, these algorithm performance will be degraded. A new phase error gradient splicing algorithm is proposed in this paper. It roughly estimates the shift amount first, and then finely estimates the shift amount based on the minimum-entropy criterion, which can improve the robustness of splicing especially when the estimation of the phase error gradients of the subaperture is not accurate enough. To speed up the algorithm, a variable-step-size search method is used. Simulation and experimental results show that the algorithm has enough accuracy and still has good performance when other splicing algorithms doesn’t perform well.

The research results presented in the article were carried out during the realization of the project, the aim of which is to develop a method of drying cellulose insulation in power transformers with the use of synthetic ester. This method uses a very high water absorption of the ester. During the drying of transformers, the ester is systematically contaminated with mineral oil, which gradually loses its ability to absorb water. Information on the oil concentration in the mixture is needed in two cases: at the stage of making a decision on the treatment of the mixture and during its treatment. The article presents the results of investigations of two methods: 1) based on the measurement of the mixture density, and 2) based on the measurement of the capacitance of the capacitor immersed in the mixture. The conducted research shows that the method of measuring the density of the mixture gives an uncertainty of 2.6 p. %, while the method of measuring the capacitance of a capacitor gives an uncertainty of 2.2 p. %. A significant advantage of the method of measuring the capacitance is the possibility of using it online to control the ester treatment process.

Increasingly, architects are looking towards nature to design more sustainable, efficient cities to reduce the environmental impact of urban life. At the moment, plants are incorporated into urban design for conservation or aesthetic reasons. Here, I argue plants can be rationally designed into synthetic systems based on chemical and other functional traits to increase the stability of urban infrastructure, protect native biodiversity, and promote human health while meeting key UN Sustainable Development Goals.

Sentinel-1 SAR data preprocessing is essential for several earth observation applications, including land cover classification, change detection, vegetation monitoring, urban growth, natural hazards, etc. The information can be extracted from the 2x2 covariance matrix [C2] of Sentinel-1 dual-pol (VV-VH) acquisitions. To generate the covariance matrix from Sentinel-1 single look complex (SLC) data, several preprocessing steps are required. The ESA SNAP S-1 toolbox can be used to preprocess the data to generate a [C2] matrix. The polarimetric analysis in respective application fields often starts with the covariance matrix. However, due to limited availability of Sentinel-1 SLC data preprocessing workflow standards for polarimetric applications in contemporary research methods, downstream applications unable to comply with these workflows directly. In this paper, we propose a couple of generic practices to preprocess Sentinel-1 SLC data in SNAP S-1 toolbox, which would be beneficial for the radar remote sensing user community.

Due to the advantages such as low power consumption and higher concealment, deceptive jamming against synthetic aperture radar (SAR) receives extensive attention during the past decades. However, the large scene deception jamming is still a challenge because of the huge computing burden. In this paper, we propose a new large scene deceptive jamming algorithm. First, the time-delay and frequency-shift (TDFS) algorithm is introduced to improve the jamming processing speed. The system function of jammer (JSF) for a fake scatter is simplified to the multiplication of the scattering coefficient, a time-delay term in range dimension and a frequency-shift term in azimuth dimension. Then, in order to solve the problem that the effective region of the TDFS algorithm is limited, the scene deceptive jamming template is divided into several blocks according to the SAR parameters and imaging quality control factor. The JSF of each block is calculated by the TDFS algorithm and added together to achieve the large scene jamming. Finally, the correction algorithm in squint mode is derived. The simplification and parallel block processing could improve the calculation efficiency significantly. The simulation results verified the validity of the algorithm.

Abstract: Yeast – especially Saccharomyces cerevisiae – have long been a preferred workhorse for the production of numerous recombinant proteins and other metabolites. S. cerevisiae is a noteworthy aroma compound producer, and has also been exploited to produce foreign bioflavour compounds. In the past few years, important strides have been made in unlocking the key elements in the biochemical pathways involved in the production of many aroma compounds. The expression of these biochemical pathways in yeast often involves the manipulation of the host strain to direct the flux towards certain precursors needed for the production of the given aroma compound. This review highlights recent advances in the bioengineering of yeast – including S. cerevisiae – to produce aroma compounds and bioflavours. To capitalise on recent advances in synthetic yeast genomics, this review presents yeast as a significant producer of bioflavours in a fresh context and proposes new directions for combining engineering and biology principles to improve the yield of targeted aroma compounds.

Ship speeds extracted from AIS data vary with ice conditions. We extrapolated this variation with SAR data to a chart of expected icegoing speed. The study is for the Gulf of Bothnia in March 2013 and for ships with ice class 1A Super that are able to navigate without icbreaker assistance. The speed was normalized to 0-10 for each ship. As the matching between AIS and SAR was complicated by ice drift during the time gap, from hours to two days, we calculated a set of local SAR statistics over several scales. We used random tree regression to estimate the speed. The accuracy was quantified by mean squared error (MSE), and the fraction of estimates close to the actual speeds. These depended strongly on the route and the day. MSE varied from 0.4 to 2.7 units² for daily routes. 65 % of the estimates deviated less than one unit and 82 % less than 1.5 units from the AIS speeds. The estimated daily mean speeds were close to the observations. Largest speed decreases were provided by the estimator in a dampened form or not at all. This improved when ice chart thickness was included as one predictor.

Saliency detection in synthetic aperture radar (SAR) image is a difficult problem. This paper proposed a multitask saliency detection (MSD) model for the saliency detection task of SAR image. Firstly, we extract four features of SAR image as the input of the MSD model, which include the intensity, orientation, uniqueness and global contrast. Then, the saliency map is generated by the multitask sparsity pursuit (MTSP) which integrates the multiple features collaboratively. Subjective and objective evaluation of the MSD model verifies its effectiveness. Based on the saliency maps of the source images, an image fusion method is proposed for the SAR and color optical image fusion. The experimental results of real data show the proposed image fusion method is superior to the presenting methods in terms of several universal quality evaluation indexes, as well as in the visual quality. The salient areas in the SAR image can be highlighted and the spatial and spectral details of color optical image can also be preserved in the fusion result.

A perfectly balanced wine can be said to create a symphony in the mouth. To achieve the sublime, both in wine and music, requires imagination and skilled orchestration of artistic craftmanship. For wine, inventiveness starts in the vineyard. Similar to a composer of music, the grapegrower produces grapes through a multitude of specifications to achieve a quality result. Different Vitis vinifera grape varieties allow the creation of wine of different genres. Akin to a conductor of music, the winemaker decides what genre to create and considers resources required to realise the grape’s potential. A primary consideration is the yeast: inoculate the grape juice or leave it ‘wild’; which specific or combined Saccharomyces strain(s) should be used; or proceed with a non-Saccharomyces species? Whilst the various Saccharomyces and non-Saccharomyces yeasts perform their role during fermentation, the performance is not over until the ‘fat lady’ (S. cerevisiae) has sung (i.e. the grape sugar has been fermented to specified dryness and alcoholic fermentation is complete). Is the wine harmonious or discordant? Will the consumer demand an encore and make a repeat purchase? Understanding consumer needs lets winemakers orchestrate different symphonies (i.e. wine styles) using single- or multi-species ferments. Some consumers will choose the sounds of a philharmonic orchestra comprising a great range of diverse instrumentalists (as is the case with wine created from spontaneous fermentation); some will prefer to listen to a smaller ensemble (analogous to wine produced by a selected group of non-Saccharomyces and Saccharomyces yeast); and others will favour the well-known and reliable superstar soprano (i.e. S. cerevisiae). But what if a digital music synthesiser ‒ such as a synthetic yeast ‒ becomes available that can produce any music genre with the purest of sounds by the touch of a few buttons? Will synthesisers spoil the character of the music and lead to the loss of the much-lauded romantic mystique? Or will music synthesisers support composers and conductors to create novel compositions and even higher quality performances that will thrill audiences? This article explores these and other relevant questions in the context of winemaking and the role that yeast and its genomics play in the betterment of wine quality.

The dynamics of surface and sub-surface water events can lead to slope instability resulting in anomalies such as slough slides on earthen levees. Early detection of these anomalies by a remote sensing approach could save time versus direct assessment. We have implemented a supervised Mahalanobis distance classification algorithm for the detection of slough slides on levees using complex polarimetric Synthetic Aperture Radar (polSAR) data. The classifier output was followed by a spatial majority filter post-processing step which improved the accuracy. The effectiveness of the algorithm is demonstrated using fully quad-polarimetric L-band Synthetic Aperture Radar (SAR) imagery from the NASA Jet Propulsion Laboratory’s (JPL’s) Uninhabited Aerial Vehicle Synthetic Aperture Radar (UAVSAR). The study area is a section of the lower Mississippi River valley in the southern USA. Slide detection accuracy of up to 98 percent was achieved, although the number of available slides examples was small.

The microbial contamination in food packaging have been a major concern that paved the way for the search for natural based new anti-microbial agents, such as modified α-mangostin. In the present work, twelve synthetic analogs were obtained via semi-synthetic modification of α-mangostin by Ritter reaction, reduction by palladium-carbon (Pd-C), alkylation, and acetylation. The evaluation of the anti-microbial potential of the synthetic analogs showed higher therapeutic value than the parent molecule. The anti-microbial studies proved that I E showed higher antibacterial activity whereas I I showed most significant antifungal activity. Due to their microbial properties, modified α-mangostin can be utilized as active anti-microbial agents in food packaging.

Synthetic fuels play an important role in the defossilization of future aviation transport. To reduce the ecological impact of remote airports due to long range transportation of kerosene, a decentralized on-site-production of synthetic paraffinic kerosene is applicable, preferably as near-drop-in fuel or alternatively as blend. One possible solution for such a production of synthetic kerosene is the Power-to-Liquid process. The basic development of a simplified plant layout addressing the specific challenges of a decentralized kerosene production which differ from most current approaches for infrastructural well-connected regions is described. The decisive influence of the Fischer-Tropsch synthesis on the PtL process is shown by means of a steady-state reactor model which was developed in Python and serves as basis for further development of a modular environment able to represent entire process chains. The reactor model is based on reaction kinetics according current literature. The effects of adjustments of the main operation parameters on the reactor behavior are evaluated and the impacts on up- and downstream processes are described. The results prove the governing influence of the Fischer-Tropsch reactor on the PtL process and show its flexibility regarding the desired product fraction output, which makes it an appropriate solution for a decentralized kerosene production.

Global food insecurity and environmental degradation creates the need to develop more sustainable agricultural solutions. Plant synthetic biology emerges as a promising yet risky avenue to develop such solutions. While synthetic biology promises enhanced crop traits, it also harbors risks of extensive environmental damage. Here, we highlight the complexities and risks associated with plant synthetic biology, while presenting the potential of multilevel mathematical modeling to assess and mitigate those risks effectively. Despite its potential, the application of multiscale mathematical models in plants remains underutilized. We advocate for the integration of technological advancements in agricultural data analysis to foster a comprehensive understanding of crops across scales. By reviewing common modeling approaches and methodologies applicable to plants, the paper sets the stage for the creation and utilization of integrated multiscale mathematical models. Leveraging modeling techniques such as parameter estimation, bifurcation analysis, and sensitivity analysis, researchers can identify mutational targets and anticipate pleiotropic effects, enhancing the safety of genetically engineered species. To illustrate the potential of the combination, we outline ongoing efforts to develop an integrated multiscale mathematical model for maize (Zea mays L.), engineered through synthetic biology to enhance resilience against Striga and drought.

This paper presents a simple and streamlined compensation technique for improving the quality of Synthetic Aperture Radar (SAR) images based on the Range Doppler Algorithm (RDA). Incorrect Doppler estimation in space orbit, caused by unexpected radar motion errors, orbit mismatches, and other factors, can significantly degrade SAR image quality. These inaccuracies result in mismatches between the azimuth-matched filter and the received Doppler chirp signal. To address this issue, we propose a Doppler estimation method that leverages the Fractional Fourier Transform (FrFT) and cross-correlation techniques. The received signals are compared with the azimuth-matched filter based on the rotation angle in the FrFT domain, and the Doppler centroid is adjusted to achieve optimal alignment. This process ensures high correlation values and enhanced resolution in the final SAR image. The efficacy of the proposed technique is validated through experiments using real spaceborne SAR data from the practical satellite. The results demonstrate significant improvements in image quality and resolution compared to conventional algorithms, highlighting the advantages of our approach for various remote sensing applications.

The general synthesis of boron-containing cyclic compounds (boracycles) necessitates toxic organotin precursors or highly reactive boron halides. Here we report the synthesis of seven- and five-membered boracycles utilizing arylboronic acid pinacol esters (ArBpins) as stable boron sources. Grignard reagents generated from 2,2′-dibromodibenzyl or 2,2′-dibromobiphenyl reacted with ArBpins, where Ar = 9-anthryl (Anth), 2,4,6-trimethylphenyl (Mes), 2,4,6-triisopropylphenyl (Tip), to give 10,11-dihydro-5H-dibenzo[b,f]borepins or dibenzoborole derivatives. This Bpin-based method was successfully applied to a one-shot double boracycle formation, providing a dihydrodibenzoborepin–anthracene–dihydrodibenzoborepin triad molecule in a good yield. The dihydrodibenzoborepin bearing the Anth group was directly converted to the unsaturated borepin by NBS/AIBN. All products were characterized by NMR, HRMS, and in some cases, single-crystal X-ray diffraction analysis. Additionally, the photophysical properties of the products are also reported.

Metabolic engineering in plants offers powerful strategies to enhance crop yield and quality, addressing global challenges in agriculture and food security. This study explores cutting-edge approaches in manipulating primary and secondary metabolic pathways, utilizing advanced genetic modification tools to improve key traits in crops. We examine successful applications that have enhanced photosynthetic efficiency, nutrient use, stress tolerance, and the production of valuable metabolites. The study also delves into emerging trends, such as synthetic biology approaches and multi-gene trait stacking, which are revolutionizing the field. By integrating omics technologies and computational modeling, researchers are optimizing metabolic engineering designs with unprecedented precision. As the field rapidly evolves, we consider the regulatory and biosafety aspects of genetically modified crops, providing insights into the future of sustainable agriculture and crop improvement.

Lipids have not traditionally been considered likely candidates for catalyzing reactions in biological systems. However, there is significant evidence that aggregates of amphiphilic compounds are capable of catalyzing reactions in synthetic organic chemistry. Here we demonstrate the potential for the hydrophobic region of a lipid bilayer to provide an environment suitable for catalysis by means of a lipozyme, or lipid aggregate capable of speeding up a chemical reaction. By bringing organic molecules into the non-polar or hydrophobic region of a lipid bilayer, reactions can be catalyzed by collections of small, nonpolar or amphiphilic molecules. We demonstrate this concept by the ester hydrolysis of calcein-AM to produce a fluorescent product, which is a widely used assay for esterase activity in cells. The reaction was first carried out in a two phase octanol-water system with the organic phase containing the cationic amphiphiles cetyltrimethylammonium bromide (CTAB) or octadecylamine. The octanol was then replaced with DOPC added to the water in the form of vesicles, where the reaction was also found to be carried out. The reaction was monitored using quantitative fluorescence which revealed catalytic turnover numbers on a scale of 10−4s−1 for each system, which is comparable to some slow enzymes. The reaction product was characterized by 1H-NMR measurements which were consistent with ester hydrolysis. The implications of thinking about lipid aggregates as catalytic entities are discussed in the context of biochemistry, pharmacology and synthetic biology.

The study of ecosystems, both natural and artificial, has historically been mediated by population dynamics theories. In this framework, quantifying population numbers and related variables (associated with metabolism or biological-environmental interactions) plays a central role in measuring and predicting system-level properties. As we move towards advanced technological engineering of cells and organisms, the possibility of bioengineering ecosystems (from the gut microbiome to wildlands) opens several questions that will require quantitative models to find answers. Here, we present a comprehensive survey of quantitative modelling approaches for managing three kinds of synthetic ecosystems, sharing the presence of engineered strains. These include test tube examples of ecosystems hosting a relatively low number of interacting species, mesoscale closed ecosystems (or ecospheres), and macro-scale, engineered ecosystems. The potential outcomes of synthetic ecosystem designs and their limits will be relevant to different disciplines, including biomedical engineering, astrobiology, space exploration and fighting climate change impacts on endangered ecosystems. We propose a space of possible ecosystems that captures this broad range of scenarios and a tentative road map for open problems and further exploration.

Public-private partnership (PPP) is a prominent tool for sustainable infrastructure development. However, the positive contributions of PPPs towards attainment of sustainable, climate resilience and zero carbon infrastructure projects are hampered by poor financial risk management. This problem is more prevalent in developing countries like Ghana where private investment inflow has plummeted due to COVID-19 recession and poor project performance. Thus, this study aims at assessing the key financial risk management strategies in ensuring sustainable PPP infrastructure projects in Ghana. The study utilised primary data from PPP practitioners in Ghana solicited through survey questionnaires. Factor analysis, mean scores and fuzzy synthetic analysis are the data analysis techniques for this study. The results revealed sustainable and green funding models, effective cost reduction initiatives, competent team with committed leadership, and emerging technologies and regulations constitute the key strategies to manage financial risks of sustainable PPP infrastructure projects. Although, future studies must expand the scope of data gathering, the findings of the study enrichen the theoretical understanding of financial risks in sustainable investments in PPP infrastructures. Relevant remedies that will aid the development of practical financial risk management guidelines are provided in this study for PPP practitioners.

Natural host defensins, also sometimes termed antimicrobial peptides, are evolutionarily conserved. They have been studied as antimicrobials, but some pharmaceutical properties, undesirable for clinical use, led to the development of synthetic molecules with constructed peptide arrangements and/or peptides not found in nature. The leading development currently is synthetic small molecule nonpeptide mimetics, whose physical properties capture the characteristics of the natural molecules, and share their biological attributes. We studied brilacidin, an arylamide of this type, for its activity in vitro against fungi (40 clinical isolates, 20 species) that the World Health Organization has highlighted as problem human pathogens. We find antifungal activity at low concentrations for many pathogens, which indicates further screening for activity, particularly in vivo, is justified to evaluate this compound, and other mimetics, as attractive leads for development of effective antifungal agents.

Indole is a versatile pharmacophore widely distributed in bioactive natural products. This privileged scaffold has been found in a variety of molecules isolated from marine organisms such as algae and sponges. Among these, indole alkaloids represent one of the biggest, most promising family of compounds, having shown a wide range of pharmacological properties, including anti-inflammatory, antiviral and anticancer activities. The aim of this review is to show the current scenario of marine indole alkaloid derivatives, covering not only the most common chemical structures, but also new synthetic routes developed during the last years as well as promising therapeutic applications.

This work presents the possibility of using a synthetic membrane for pretracing mucosal penetration studies. The permeability of two types of membranes, porcine oral mucosa and a synthetic Nuclepore membrane, to water was compared. Moreover, the water permeability of membranes modified with waterproofing formulations was measured to study their ability to protect against the penetration of viruses, toxins, etc. A very good correlation was obtained between the transmucosal water loss (TMWL) values of the artificial membrane and the mucosa. These results support the possible use of this synthetic membrane in the screening of the water permeability of formulations. In addition, studies of the permeation of different actives, drugs and biocides through the two membranes were carried out, and these results were compared with their skin permeation data. The synthetic membrane does not seem to discern between compounds in terms of permeability, which could be due to the lack of lipids in the composition of this synthetic membrane. Therefore, Nuclepore alone cannot be used as a model for the release of actives. Additionally, the permeation of caffeine through intact or modified membranes incorporating waterproofing formulations was also studied. In this case, similar permeation profiles through the synthetic membrane and mucosa were found. The results from these assays should lend support to the use of this synthetic membrane when screening formulations to be applied in oral penetration studies.

Lodging is one of the important factors affecting the high and stable yield of wheat worldwide. Solid-stemmed wheat has higher stem strength and lodging resistance than hollow-stemmed wheat. There are many solid stemmed varieties, landraces and old varieties of durum wheat. However, the transfer of solid stem genes from durum wheat is suppressed by the suppressor gene located on chromosome 3D in common wheat, and only hollow-stemmed lines have been created. However, synthetic hexaploid wheat can serve as a bridge to transfer solid stem genes from tetraploid wheat to common wheat. In this study, the F1, F2, and F2:3 generations of the cross between solid-stemmed Syn-SAU-119 and semisolid-stemmed Syn-SAU-117 were developed. A single dominant gene, tentatively designated Su-TdDof, was identified in synthetic hexaploid wheat Syn-SAU-117 by genetic analysis, which suppresses stem solidity. Using bulked segregant RNA-seq (BSR-seq) analysis, Su-TdDof was mapped to chromosome 7DS and flanked by markers KASP-669 and KASP-1055 within a 4.53 cM genetic interval corresponding to 3.86 Mb and 2.29Mb physical region in the Chinese Spring (IWGSC RefSeq v1.1) and Ae. tauschii (AL8/78 v4.0) genome, respectively, in which three genes related to solid stem development were annotated. Su-TdDof differed from a previously reported solid stem suppressor gene based on its origin and position. Su-TdDof would provide a valuable example for research on the suppression phenomenon. The flanking markers developed in this study would be useful for screening Ae. tauschii accessions with no suppressor gene (Su-TdDof) to develop more synthetic hexaploid wheat lines for wheat lodging resistance breeding and further cloning the suppressor gene Su-TdDof.

Most research findings in Ghana and all over the globe lay much emphasis on the technical knowledge of plastics; especially giving preference to the biodegradable over the synthetic/Single-Use plastics. Questionnaires were administered to about 200 respondents in the Ho Municipality out of which 163 responses were filled and returned. Results showed that of all the variables tested only Legislative Framework has a meaningful impact on the behaviour of Ho indigenes. Awareness level: (Synthetic Plastics and Biodegradable Plastics) as well as Attitudinal Change do not influence people’s behaviour when using plastics. Findings from this study are further discussed and recommendations were proffered to instil eco-friendly behaviour among people.

The influence of long-term chemical fertilization in paddy soils is based on the interaction between labile carbon and phosphorus fractions and how this influences soil organic carbon (SOC). Four soil depths (0–30 cm) were analyzed in this study. Easily oxidized organic carbon components, such as permanganate oxidized carbon (POXC) and dissolved organic carbon (DOC), and other physicochemical soil factors were evaluated. The correlation and principal component analyses were used to examine the relationship between soil depth and the parameter dataset. The results showed that Fe-P concentrations were greater in the 0–5 cm soil layer. DOC, inorganic phosphate fraction, and other soil physiochemical characteristics interacted more strongly with SOC in the 0–5 cm soil layer, compared to that in the 10–15 cm layer, influencing soil acidity. An increase in DOC in the 0–5 cm soil layer had a considerable effect on lowering SOC, consistent with P positively correlated with POXC, but negatively with SOC and water-soluble carbon (WSC). The changes in SOC could be attributed to the relationship between DOC and inorganic phosphate fractions (as Fe-P) under a specific soil pH condition. An increase in soil DOC could be caused by changes in the P fraction and pH. The DOC:Avai. P ratio could serve as a compromise for the C and P dynamic indicators. The soil depth interval is a critical element that influences these interactions. Agricultural policy and decision-making may be influenced by the P from chemical fertilization practices, considering the yields and environmental effects.

Synthetic cannabinoids are a series of synthetic substances that mimic the effects of natural cannabinoids and produce a much stronger toxicity than natural cannabinoids, which have become the most abused family of new psychoactive substances. A solid-phase extractive-liquid chromatography-triple quadrupole/linear ion trap mass spectrometry method was developed to determine 11 synthetic cannabinoids in rat urine. The factors affecting recovery were optimized, and Oasis HLB was selected to extract synthetic cannabinoids simultaneously. The results showed that the linear correlation coefficients of the synthetic cannabinoids ranged from 0.993 to 0.999, and the limit of quantitation ranged from 0.01 to 0.1 ng/mL, and the spiked recoveries ranged from 69.90% to 118.39%. This method has the advantages of good purification ability, simple operation, and good reproducibility, and can be used for the high sensitivity analysis of various synthetic cannabinoids in urine.

With the aim of profitable conversion of carbon dioxide (CO2) in an efficient, economical and sustainable manner, we developed a CuBr/ionic liquid (1-butyl-3-methylimidazolium acetate) catalytic system which could efficiently catalyze the three-component reactions of propargylic alcohols, 2-aminoethanols, and CO2 to produce 2-oxazolidinones and α-hydroxy ketones. Remarkably, this catalytic system employed lower metal loading (0.0125-0.5 mol%) but exhibited the highest turnover number (2960) ever reported, demonstrating its excellent activity and sustainability. Moreover, our catalytic system could efficiently work under 1 atm of CO2 pressure and recycle among the metal-catalyzed systems.

Biological systems often need to operate in complex environments where conditions can rapidly change. This is possible due to their inherent ability to sense changes and adapt their behavior in response. Here, we detail recent advances in the creation of synthetic genetic parts and circuits whose behaviors can be dynamically tuned through a variety of intra- and extra-cellular signals. We show how this capability lays the foundation for implementing control engineering schemes in living cells and allows for the creation of biological systems that are able to self-adapt, ensuring their functionality is maintained in the face of varying environmental and physiological conditions. We end by discussing some of the broader implications of this technology for the safe deployment of synthetic biology.

Abstract: The biological process of photosynthesis was critical in catalyzing the oxygenation of Earth’s atmosphere 2.5 billion years ago, changing the course of development of life on Earth. Recently, the fields of applied and synthetic photosynthesis have utilized the light-driven protein-pigment supercomplexes central to photosynthesis for the photocatalytic production of fuel and other various valuable products. The reaction center Photosystem I is of particular interest in applied photosynthesis due to its high stability post-purification, non-geopolitical limitation, and its ability to generate the greatest reducing power found in Nature. These remarkable properties have been harnessed for the photocatalytic production of a number of valuable products in the applied photosynthesis research field. These primarily include photocurrents and molecular hydrogen as fuels. The use of artificial reaction centers to generate substrates and reducing equivalents to drive non-photoactive enzymes for valuable product generation has been a long-standing area of interest of the synthetic photosynthesis research field. In this review, we cover advances in these areas and further speculate synthetic and applied photosynthesis as photocatalysts for the generation of valuable products.

Sentinel-1 satellite system continuously observes European countries in a relatively high revisit frequency of 6 days per orbital track. Given the Sentinel-1 configuration, most areas in Czechia are observed every 1–2 days by different tracks in a moderate resolution. This is attractive for various types of analyses by various research groups. The starting point for processing is an original data provided by ESA, for interferometry (InSAR) this level is a Single Look Complex (SLC) data. This work represents advantages of storing data augmented to a specifically corrected level of data, SLC-C. The presented database contains Czech nation-wide Sentinel-1 data stored in burst units that have been preprocessed to the state of a consistent well-coregistered dataset of SLC-C. These are resampled SLC data with their phase values reduced by a topographic phase signature, ready for fast interferometric analyses (an interferogram is generated by a complex conjugate between two stored SLC-C files). The data can be used directly into multitemporal interferometry techniques, e.g. Persistent Scatterers (PS) or Small Baseline (SB) techniques applied here. A further development of the nation-wide system utilising SLC-C data would lead into a dynamic state where every new pre-processed burst triggers a processing update to detect unexpected changes from InSAR time series and therefore provide a signal for early warning against a potential dangerous displacement, e.g. a landslide, instability of an engineering structure or a formation of a sinkhole. An update of the processing chain would also allow use of cross-polarised Sentinel-1 data, needed for polarimetric analyses. The current system is running at a national supercomputing centre IT4Innovations in interconnection to the Czech Copernicus Collaborative Ground Segment (CESNET), providing fast on-demand InSAR results over Czech territories. A full nation-wide PS processing using data over Czechia has been performed in 2017, discovering several areas of land deformation. Its downsampled version and basic findings are demonstrated within the article.