ARTICLE | doi:10.20944/preprints202111.0466.v1
Subject: Mathematics & Computer Science, Applied Mathematics Keywords: 3D Zernike moments; 3D Zernike radial polynomials; 3D Zernike polynomials; Spherical harmonics; Recurrence formula; Matrix Lie Group; Group action
Online: 25 November 2021 (09:54:08 CET)
3D Zernike moments based on 3D Zernike polynomials have been successfully applied to the field of voxelized 3D shape retrieval and have attracted more attention in biomedical image processing. As the order of 3D Zernike moments increases, both computational efficiency and numerical accuracy decrease. Due to this phenomenon, a more efficient and stable method for computing high-order 3D Zernike moments was proposed in this study. The proposed recursive formula for computing 3D Zernike radial polynomials combines the recursive calculation of spherical harmonics to develop a voxel-based algorithm for the calculation of 3D Zernike moments. The algorithm was applied to the 3D shape Michelangelo's David with a size of 150×150×150 voxels. As compared to the method without additional acceleration, the proposed method uses a group action of order sixteen orthogonal group and saving unnecessary iterations, the factor of speed-up is 56.783±3.999 when the order of Zernike moments is between 10 and 450. The proposed method also obtained an accurate reconstructed shape with the error rate (normalized mean square error) of 0.00 (4.17×10^-3) when the reconstruction was computed for all moments up to order 450.
ARTICLE | doi:10.20944/preprints202211.0129.v1
Subject: Engineering, Electrical & Electronic Engineering Keywords: 3D shapes; single-view reconstruction; gradient map; fine-grained
Online: 8 November 2022 (01:04:00 CET)
There has been considerable research on reconstructing 3D shapes from single-view images; however, preserving the detailed information of the input image remains difficult. In this paper, we propose the application of a gradient map to train a network, aimed at improving the visual quality of fine-grained details such as the thin and tiny components of generated shapes. Each gradient map was created from the original voxel data, and each value represented the amount of information per volume. Here, the gradient map was defined by several methods that mathematically quantify and represent the detailed structure of an object. By applying this map to the loss function in training, we could induce the network to intensively train partial details, such as thin and narrow parts. We demonstrated that the detailed information was well-recovered when a weight that is proportional to the gradient value was applied to the loss. Furthermore, it is expected that our method will contribute to the development of 3D technologies related to the construction of virtual space for simulation and new customer experience.
REVIEW | doi:10.20944/preprints202208.0067.v1
Subject: Mathematics & Computer Science, Artificial Intelligence & Robotics Keywords: deep learning; 3D reconstruction; convolutional neural networks; texture-less surfaces
Online: 2 August 2022 (12:17:08 CEST)
3D reconstruction from a single 2D input is a classic problem in the field of computer vision. With the advancements in deep learning, the performance of 3D reconstruction has also significantly improved. The reconstruction task is more difficult for objects with no textures or complex deformations. This paper serves as a review of recent literature on 3D reconstruction from a single view, with a focus on deep learning methods from 2018 to 2021. Due to lack of standard datasets or 3D shape representation methods, it is hard make direct comparisons between all reviewed methods. However, this paper reviews different approaches for reconstructing 3d shape as depth maps, surface normals, point clouds and meshes; along with various loss functions and evaluation metrics used to train and evaluate these methods.
Subject: Keywords: 3D object reconstruction, depth cameras, Kinect sensors; open source, signal denoising, SLAM
Online: 9 April 2019 (12:24:34 CEST)
3D object reconstruction from depth image streams using Kinect-style depth cameras has been extensively studied. In this paper, we propose an approach for accurate camera tracking and volumetric dense surface reconstruction assuming a known cuboid reference object is present in the scene. Our contribu¬tion is three-fold. (a) We maintain drift-free camera pose tracking by incorporating the 3D geometric constraints of the cuboid reference object into the image registration process. (b) We reformulate the problem of depth stream fusion as a binary classification problem, enabling high-fidelity surface reconstruction, especially in the con¬cave zones of objects. (c) We further present a surface denoising strategy to mitigate the topological inconsistency (e.g., holes and dangling triangles), which facilitates the generation of a noise-free triangle mesh. We extend our public dataset CU3D with several new image sequences, test our algorithm on these sequences and quantitatively compare them with other state-of-the-art algorithms. Both our dataset and our algorithm are available as open-source content at https://github.com/zhangxaochen/CuFusion for oth-er researchers to reproduce and verify our results.
ARTICLE | doi:10.20944/preprints201805.0225.v1
Subject: Engineering, Construction Keywords: 3D thermal model; image fusion; smart phone; thermal IR
Online: 16 May 2018 (08:26:39 CEST)
Thermal infrared imagery provides temperature information on target objects, and has been widely applied in non-destructive testing. However, thermal infrared imagery is not always able to display detailed textures of inspected objects, which hampers the understanding of geometric entities consisting of temperature information. Although some commercial software has been developed for 3D thermal model displays, the software requires the use of expensive specific thermal infrared sensors. This study proposes a cost-effective method for 3D thermal model reconstruction based on image-based modeling. Two smart phones and a low-cost thermal infrared camera are employed to acquire visible images and thermal images, respectively, that are fused for 3D thermal model reconstruction. The experiment results demonstrate that the proposed method is able to effectively reconstruct a 3D thermal model which extremely approximates its corresponding entity. The total computation time for the 3D thermal model reconstruction is intensive while generating dense points required for the creation of a geometric entity. Future work will improve the efficiency of the proposed method in order to expand its potential applications to in-time monitoring.
ARTICLE | doi:10.20944/preprints202110.0362.v1
Subject: Mathematics & Computer Science, Probability And Statistics Keywords: 3D reconstruction; 3D data smoothing; mesh simplification; high resolution micro-CT images
Online: 25 October 2021 (15:34:27 CEST)
Three-dimensional reconstruction plays an important role in assisting doctors and surgeons in diagnosing bone defects’ healing progress. Common three-dimensional reconstruction methods include surface and volume rendering. As the focus is on the shape of the bone, volume rendering is omitted. Many improvements have been made on surface rendering methods like Marching Cubes and Marching Tetrahedra, but not many on working towards real-time or near real-time surface rendering for large medical images, and studying the effects of different parameter settings for the improvements. Hence, in this study, an attempt towards near real-time surface rendering for large medical images is made. Different parameter values are experimented on to study their effect on reconstruction accuracy, reconstruction and rendering time, and the number of vertices and faces. The proposed improvement involving three-dimensional data smoothing with convolution kernel Gaussian size 0.5 and mesh simplification reduction factor of 0.1, is the best parameter value combination for achieving a good balance between high reconstruction accuracy, low total execution time, and a low number of vertices and faces. It has successfully increased the reconstruction accuracy by 0.0235%, decreased the total execution time by 69.81%, and decreased the number of vertices and faces by 86.57% and 86.61% respectively.
ARTICLE | doi:10.20944/preprints202105.0468.v1
Subject: Mathematics & Computer Science, Artificial Intelligence & Robotics Keywords: 3D reconstruction; ICP; Azure Kinect; RGB-D image processing; point cloud filtering; rapeseed
Online: 20 May 2021 (09:52:14 CEST)
The 3D reconstruction method using RGB-D camera has a good balance in hardware cost, point cloud quality and automation. However, due to the limitation of inherent structure and imaging principle, the acquired point cloud has problems such as a lot of noise and difficult registration. This paper proposes a three-dimensional reconstruction method using Azure Kinect to solve these inherent problems. Shoot color map, depth map and near-infrared image of the target from six perspectives by Azure Kinect sensor. Multiply the 8-bit infrared image binarization with the general RGB-D image alignment result provided by Microsoft to remove ghost images and most of the background noise. In order to filter the floating point and outlier noise of the point cloud, a neighborhood maximum filtering method is proposed to filter out the abrupt points in the depth map. The floating points in the point cloud are removed before generating the point cloud, and then using the through filter filters out outlier noise. Aiming at the shortcomings of the classic ICP algorithm, an improved method is proposed. By continuously reducing the size of the down-sampling grid and the distance threshold between the corresponding points, the point clouds of each view are continuously registered three times, until get the complete color point cloud. A large number of experimental results on rape plants show that the point cloud accuracy obtained by this method is 0.739mm, a complete scan time is 338.4 seconds, and the color reduction is high. Compared with a laser scanner, the proposed method has considerable reconstruction accuracy and a significantly ahead of the reconstruction speed, but the hardware cost is much lower and it is easy to automate the scanning system. This research shows a low-cost, high-precision 3D reconstruction technology, which has the potential to be widely used for non-destructive measurement of crop phenotype.
ARTICLE | doi:10.20944/preprints201904.0181.v1
Subject: Physical Sciences, Applied Physics Keywords: laser ultrasonics; non-contact transducers; defects; NDT; SAFT; synthetic aperture; apodization; weighting function; 3D reconstruction
Online: 16 April 2019 (10:41:54 CEST)
Non-destructive testing of metallic objects that may contain embedded defects of different sizes is an important application in many industrial branches for quality control. Most of these techniques allow defect detection and its approximate localization, but very few give enough information for its 3D reconstruction. Here we present a hybrid laser – transducer system that combines remote laser-generated ultrasound excitation and non-contact ultrasonic transducer detection. This fully non-contact method gives access to separating scan areas on different object’s faces and defect details from different angles/perspectives can be analysed. This hybrid system can analyse the whole object’s volume data and allow a 3D reconstruction image of the embedded defects. As a novelty for the signal processing improvement, we use a 2D apodization window filtering technique, applied along with the synthetic aperture focusing algorithm in order to remove the undesired effects of side lobes and wide-angle reflections of propagating ultrasound waves, thus, enhancing the resulting 3D image of the defect. We provide both qualitative and quantitative volumetric results with high accuracy and resolution compared with conventional techniques.
Subject: Mathematics & Computer Science, Artificial Intelligence & Robotics Keywords: photogrammetry; metrology; underwater 3D reconstruction; structure-from-motion; navigation fusion; multi-objective BA; laser scalers; Monte-Carlo simulation; uncertainty estimation; scale drift evaluation; laser spot detection
Online: 15 July 2019 (05:22:16 CEST)
Rapid developments in the field of underwater photogrammetry have given scientists1the ability to produce accurate 3-dimensional (3D) models which are now increasingly used in the representation and study of local areas of interest. This paper addresses the lack of systematic analysis of 3D reconstruction and navigation fusion strategies, as well as associated error evaluation of models produced at larger scales in GPS-denied environments using a monocular camera (often in deep-sea scenarios). Based on our prior work on automatic scale estimation of Structure from Motion (SfM)-based 3D models using laser scalers, an automatic scale accuracy framework is presented. The confidence level for each of the scale error estimates is independently assessed through the propagation of the uncertainties associated with image features and laser spot detections using a Monte Carlo simulation. The number of iterations used in the simulation was validated through the analysis of the final estimate behaviour. To facilitate the detection and uncertainty estimation of even greatly attenuated laser beams, an automatic laser spot detection method, mitigating the effects of scene texture, was developed, with the main novelty of estimating the uncertainties based on the recovered characteristic shapes of laser spots with radially decreasing1 intensities. The effects of four different reconstruction strategies resulting from the combinations of Incremental/GlobalSfM, and thea priori/a posterioriuse of navigation data were analyzed using two distinct survey scenarios captured during the SUBSAINTES 2017 cruise (doi: 10.17600/17001000). The study demonstrates that surveys with multiple overlaps of non-sequential images result in a nearly identical solution regardless of the strategy (SfM or navigation fusion), while surveys with weakly connected sequentially acquired images are prone to produce broad-scale deformation (doming effect) when navigation is not included in the optimization. Thus the scenarios with complex survey patterns substantially benefit from using multi-objective BA navigation fusion. In all cases, the errors in the models are inferior to 5%, with errors often being around 1%. The effects of combining data from multiple surveys were also evaluated. The introduction of additional vectors in the optimization of multi-survey problems successfully accounted for offset changes present in the underwater USBL-based navigation data and thus minimize the effect of contradicting navigation priors. Our results also illustrate the importance of collecting a multitude of evaluation data at different locations and moments during the survey.
ARTICLE | doi:10.20944/preprints202205.0136.v1
Subject: Engineering, Biomedical & Chemical Engineering Keywords: 3D printing; microscopy; CAD; FDM; cell shape; cytoskeleton; tactile education; data visualization; modelling; Materialise Mimics; CiTo-3DP
Online: 10 May 2022 (10:10:24 CEST)
Additive manufacturing (3D printing) and computer-aided design (CAD) still have limited up-take in biomedical and bioengineering research and education, despite the significant potential of these technologies. The utility of organ-scale 3D-printed models of living structures is widely appreciated, while the workflows for microscopy data translation into tactile-accessible replicas are not well developed yet. Here, we demonstrate an accessible and reproducible CAD-based methodology for generating 3D-printed scalable models of human cells cultured in vitro and imaged using conventional scanning confocal microscopy and fused deposition modelling (FDM) 3D printing. We termed this technology CiTo-3DP (Cells-in-Touch for 3D Printing). As a proof-of-concept, we created CiTo-3DP models of human pancreatic cancer cells and healthy dermal fibroblasts by using selectively stained nuclei and the cytoskeleton components (f-actin and α-smooth muscle actin). The production of dismountable sets of cellular components was al-so shown. The CiTo-3DP approach can be adapted to comprehensively present various cell types, subcellular structures and extracellular matrices. We envisage that the resulting CAD and 3D printed models could be used for further applications, including but not limited to in silico simulations for biology, medicine, pharmacological research, tissue engineering, morphometrical analysis, multiphysics modelling, education, rehabilitation of visually impaired people, and integration into virtual reality.
ARTICLE | doi:10.20944/preprints202009.0288.v1
Subject: Arts & Humanities, Architecture And Design Keywords: digitization; 3D modeling; drawings; Renaissance; Leonardo da Vinci; Manuscript B; parametric
Online: 13 September 2020 (15:21:56 CEST)
Among many other themes, Leonardo da Vinci’s Manuscript B contains several drawings of centrally planned churches, some of which are represented using a plan view paired with a bird’s-eye view. The use of a bird’s-eye instead of an elevation represents an innovative depiction technique, which allows to combine the immediacy of the perspective view with the measurability of the façades, and therefore to describe the three-dimensionality of the buildings. To understand the reasons behind the use of this original technique, the edifices’ shape and classify them we decided to use 3D digital reconstruction techniques, for their ability to avoid misunderstandings in the reconstruction process and in the results. This article describes the method to create the digital models of sixteen churches. A Visual programming language (VPL) script was used as 3D base for modelling the churches achieved from a classification code expressing the aggregative rules of the churches. Then, the geometric process for the construction of the plan and its relationship with the elevation measures was studied for each church. Finally, this information was used for the completion of the 3D models, distinguishing more output variants each time there was an inconsistency between plan and perspective view, a variability of one architectural element or an uncertainty.
REVIEW | doi:10.20944/preprints202202.0303.v1
Subject: Life Sciences, Biotechnology Keywords: 3D bioprinting; 3D printing; bioink; cancer; cell biology
Online: 24 February 2022 (08:08:44 CET)
Tumor cells evolve in a complex and heterogeneous environment composed of different cell types and an extracellular matrix. Current 2D culture methods are very limited in their ability to mimic the cancer cell environment. In recent years, various 3D models of cancer cells have been developed, notably in the form of spheroids/organoids, using scaffold or cancer-on-chip devices. However, these models have the disadvantage of not being able to precisely control the organization of multiple cell types in complex architecture and are sometimes not very reproducible in their production, and this is especially true for spheroids. Three-dimensional bioprinting can produce complex, multi-cellular, and reproducible constructs in which the matrix composition and rigidity can be adapted locally or globally to the tumor model studied. For these reasons, 3D bioprinting seems to be the technique of choice to mimic the tumor microenvironment in vivo as closely as possible. In this review, we discuss different 3D-bioprinting technologies, including bioinks and crosslinkers that can be used for in vitro cancer models, and the techniques used to study cells grown in hydrogels; finally, we provide some applications of bioprinted cancer models.
ARTICLE | doi:10.20944/preprints201704.0075.v1
Subject: Physical Sciences, Applied Physics Keywords: femtosecond laser 3D microfabrication; 3D printing; nanotechnology; microfluidics; lab-on-chip
Online: 13 April 2017 (10:32:29 CEST)
An approach employing ultrafast laser hybrid subtractive-additive microfabrication combining ablation, 3D nanolithography and welding is proposed for the realization of Lab-On-Chip (LOC) device. Single amplified Yb:KGW fs-pulsed laser source is shown to be suitable for fabricating microgrooves in glass slabs, polymerization of fine-meshes filter out of hybrid organic-inorganic photopolymer SZ2080 inside them, and, lastly, sealing the whole chip with cover glass into a single monolithic piece. The created microfluidic device proved its particle sorting function by separating 1 μm and 10 μm polystyrene spheres in a mixture. All together, this shows that fs-laser microfabrication technology is a flexible and versatile tool for the manufacturing of mesoscale multi-material LOC devices.
ARTICLE | doi:10.20944/preprints202102.0104.v1
Online: 3 February 2021 (10:07:28 CET)
In the production of green parts from powder, there is unavoidable slight deviation in the die filling, even when high-quality powders are used. The quantity of powder in the die varies and thus affects the weight of the compact. This filling variation results in variation of the pressing force, and thus influences the part geometry. The development of the DORST Netshape® System was conceived as an autonomous manufacturing system in order to compensate for these effects. Based on the Dorst Industry 4.0 innovations for part weight measuring immediately after pressing in combination with a laser dimension measuring system, this technology package attempts to reach enhanced precision and consistency in production. The paper presents results from various trials that show the capability of this new system, designed to improve the quality of pressed parts.
ARTICLE | doi:10.20944/preprints202102.0103.v1
Online: 3 February 2021 (10:07:12 CET)
This paper presents the results of the investigation of composite sinters W-TiB2 which were used as an electrode in the process of electro-spark deposition (ESD) and the examination of the deposited layers. The scope of the study includes detailed characteristics of powder mixtures, composite sinters made using the spark plasma sintering method (SPS) and layers deposited in the electro-spark process. The ESD process, using the W+30 vol.% TiB2 electrode, was carried out using an automated device. The substrates were made of copper and aluminium. The topography analysis of the surfaces of the composite layer and the evaluation of their wear resistance properties are also presented. The analysis of the results of research showed the possibility to obtain, using the SPS method, composite materials of good quality, which can be used as electrodes in the ESD process. The obtained layers had increased wear resistance in relation to the substrate material.
ARTICLE | doi:10.20944/preprints202102.0041.v1
Online: 1 February 2021 (14:07:02 CET)
We present progress in fast, high-resolution imaging, material classification, and fault detection using hyperspectral X-ray measurements. Classical X-ray CT approaches rely on data from many projection angles, resulting in long acquisition and reconstruction times. Additionally, conventional CT cannot distinguish between materials with similar densities. However, in additive manufacturing, the majority of materials used are known a priori. This knowledge allows to vastly reduce the data collected and increase the accuracy of fault detection. In this context, we propose an imaging method for non-destructive testing of materials based on the combination of spectral X-ray CT and discrete tomography. We explore the use of spectral X-ray attenuation models and measurements to recover the characteristic functions of materials in heterogeneous media with piece-wise uniform composition. We show by means of numerical simulation that using spectral measurements from a small number of angles, our approach can alleviate the typical deterioration of spatial resolution and the appearance of streaking artifacts.
ARTICLE | doi:10.20944/preprints202102.0026.v1
Online: 1 February 2021 (12:41:04 CET)
Fatigue remains a challenge especially for high end metal AM parts and materials. From a design perspective, the fatigue limit of an AM solution can be improved upon by optimizing the manufacturing process for a certain material and part. In addition, improved accuracy of design methodologies aids in capturing the features critical for fatigue and quantifies their significance to desired part lifetime as well as providing a basis for their avoidance. In current work we present an overall concept merging thermomechanical process and powder bed solidification modeling to micromechanical analysis of fatigue of the resulting material microstructure. Material features critical to fatigue, particularly surface roughness, internal defects such as porosity and cracks and on the other hand inclusions, can be assessed directly on the basis of AM part microstructure with respect to the resulting fatigue limit. Case analyses consist of maraging steel and nickel alloys. The overall scheme provides a basis for optimization of metal AM solutions against fatigue and multiscale modeling founded basis for fatigue design.
Online: 29 January 2021 (11:59:58 CET)
Quality assurance has been one of the major challenges in laser-based additive manufacturing (AM) processes. This study proposes a novel process modeling methodology for layer-wise in-situ quality monitoring based on image series analysis. An image-based autoregressive (AR) model has been proposed based on the image registration function between consecutively observed thermal images. Image registration is used to extract melt pool location and orientation change between consecutive images, which contains sensing stability information. Subsequently, a Gaussian process model is used to characterize the spatial correlation within the error matrix. Finally, the extracted features from the aforementioned processes are jointly used for layer-wise quality monitoring. A case study of a thin wall fabrication by a Directed Laser Deposition (DLD) process is used to demonstrate the effectiveness of the proposed methodology.
Online: 28 January 2021 (15:30:45 CET)
Additive Manufacturing (AM) simplifies the fabrication of complex geometries. Its scope has rapidly expanded from the fabrication of pre-production visualization models to the manufacturing of end use parts driving the need for better part quality assurance in the additively manufactured parts. Machine learning (ML) is one of the promising techniques that can be used to achieve this goal. Current research in this field includes the use of supervised and unsupervised ML algorithms for quality control and prediction of mechanical properties of AM parts. This paper explores the applications of supervised learning algorithms - Support Vector Machines and Random Forests. Support vector machines provide high accuracy in classifying the data and is used to decide whether the final parts have the desired properties. Random Forests consist of an ensemble of decision trees capable of both classification and regression. This paper reviews the implementation of both algorithms and analyzes the research carried out on their applications in AM.
BRIEF REPORT | doi:10.20944/preprints202012.0772.v1
Online: 31 December 2020 (09:08:09 CET)
OBJECTIVE: Although 3D-printed anatomic models are not new to medicine, the high costs and lengthy production times entailed have limited their application. Our goal was developing a new and less costly 3D modeling method to depict organ-tumor relations at faster printing speeds. METHODS: We have devised a method of 3D modeling using DICOM images. Coordinates are extracted at a specified interval, connecting them to create mesh-work replicas. Adjacent constructs are depicted by density variations, showing anatomic targets (ie, tumors) in contrasting color. RESULTS: An array of organ solid-tumor models were printed via Fused Deposition Modeling 3D printer at significantly less cost ($0.05/cm3) and time expenditure (1.73 min/cm3; both, p<.001). Printed models helped promote visual appreciation of organ-tumor anatomy and adjacent tissues. Our mesh-work 3D thyroidal prototype reproduced glangular size/contour and tumor location, readily approximating the surgical specimen. CONCLUSIONS: This newly devised mesh-type 3D printing method may facilitate anatomic modeling for personalized care and improve patient awareness during informed surgical consent.
ARTICLE | doi:10.20944/preprints201704.0082.v1
Subject: Engineering, Biomedical & Chemical Engineering Keywords: 3D Printing; Microfluidics; Micromixing
Online: 14 April 2017 (06:03:24 CEST)
3D printing facilitates the straightforward construction of microchannels with complex three-dimensional architectures. Here, we demonstrate 3D-printed modular mixing components that operate on the basis of splitting and recombining fluid streams to decrease interstream diffusion length. These are compared to helical mixers that operate on the principle of chaotic advection.
TECHNICAL NOTE | doi:10.20944/preprints202007.0556.v1
Subject: Earth Sciences, Geoinformatics Keywords: Solar radiation; 3D city models; Urban environment; GRASS GIS r.sun; 3D extension
Online: 23 July 2020 (12:20:40 CEST)
Solar3D is an open-source software application designed to interactively calculate solar irradiation at three-dimensional (3D) surfaces in a virtual environment constructed with combinations of 3D city models, digital elevation models (DEMs), digital surface models (DSMs) and feature layers. The GRASS GIS r.sun solar radiation model computes solar irradiation based on two-dimensional (2D) raster maps for given day, latitude, surface and atmospheric conditions. With the increasing availability of 3D city models and demand for solar energy, there is an urgent need for better tools to computes solar radiation directly with 3D city models. Solar3D extends GRASS GIS r.sun from 2D to 3D by feeding the model with input, including surface slope, aspect and time-resolved shading, that is derived directly from the 3D scene using computer graphics techniques. To summarize, Solar3D offers several new features which, as a whole, distinguish itself from existing 3D solar irradiation tools: (1) the ability to consume massive heterogeneous 3D city models, including massive 3D city models such as oblique airborne photogrammetry-based 3D city models (OAP3Ds or integrated meshes); (2) the ability to perform near real-time pointwise calculation for duration from daily to annual; (3) the ability to integrate and interactively explore large-scale heterogeneous geospatial data. (4) the ability to calculate solar irradiation at arbitrary surface positions including at rooftops, facades and the ground. Solar3D is publicly available at https://github.com/jian9695/Solar3D.
REVIEW | doi:10.20944/preprints202003.0220.v1
Subject: Biology, Ecology Keywords: 3D printing; 3D scanning; customized ecological objects; methods; stereolithography; open-source lab
Online: 12 March 2020 (14:46:07 CET)
3D printing is described as the third industrial revolution: its impact is global in industry and progresses every day in society. It presents a huge potential for ecology and evolution, sciences with a long tradition of inventing and creating objects for research, education and outreach. Its general principle as an additive manufacturing technique is relatively easy to understand: objects are created by adding material layers on top of each other. Although this may seem very straightforward on paper, it is much harder in the real world. Specific knowledge is indeed needed to successfully turn an idea into a real object, because of technical choices and limitations at each step of the implementation. This article aims at helping scientists to jump in the 3D printing revolution, by offering a hands-on guide to current 3D printing technology. We first give a brief overview of uses of 3D printing in ecology and evolution, then review the whole process of object creation, split into three steps: (1) obtaining the digital 3D model of the object of interest, (2) choosing the 3D printing technology and material best adapted to the requirements of its intended use, (3) pre- and post-processing the 3D object. We compare the main technologies available and their pros and cons according to the features and the use of the object to be printed. We give specific and key details in appendices, based on examples in ecology and evolution.
ARTICLE | doi:10.20944/preprints201611.0001.v1
Subject: Materials Science, Polymers & Plastics Keywords: direct laser writing; ultrafast laser; 3D laser lithography; 3D printing; hybrid polymer; integrated microoptics; optical damage; photonics; pyrolysis; ceramic 3D structures
Online: 1 November 2016 (04:59:50 CET)
We introduce optically clear and resilient free-form micro-optical of pure (non-photosensitized) organic-inorganic SZ2080 material made by femtosecond 3D laser lithography (3DLL). This is advantageous for rapid printing of 3D micro-/nanooptics, including their integration directly onto optical fibers. A systematic study on the fabrication peculiarities and quality of resultant structures is performed. Comparison of microlenses’ resiliency to CW and femtosecond pulsed exposure is determined. Experimental results prove that pure SZ2080 is ∼3 fold more resistant to high irradiance as compared with a standard photo-sensitized material and can sustain up to 1.91 GW/cm2 intensity. 3DLL is a promising manufacturing approach for high-intensity micro-optics for emerging fields in astro-photonics and atto-second pulse generation. Additionally, pyrolysis is employed to shrink structures up to 40% by removing organic SZ2080 constituents. This opens a promising route towards downscaling photonic lattices and creation of mechanically robust glass-ceramic structures.
ARTICLE | doi:10.20944/preprints202104.0754.v1
Online: 28 April 2021 (15:34:49 CEST)
Path planning in 3D environment is a fundamental research area for robots and autonomous vehicles. Based on the principle ``the shortest path consists of tangents'', RimJump* is proposed as a tangent-based path planning method suitable for finding the shortest path (both off-ground and on-ground) in 3D space (e.g., octomap and point cloud) for mobile platform to follow. RimJump* searches the tangent graph in the form of a path tree and considers the geometrical properties of the locally shortest path. Therefore, the method can provide all of the locally shortest paths that connect the starting point and the target, including the globally shortest path. And the time cost of RimJump* is insensitive to map scale increases in comparison to methods that search the whole passable space rather than the surface of the obstacle, e.g., Dijkstra and A*. In the Results, RimJump* is compared with other methods in terms of path length and time cost.
ARTICLE | doi:10.20944/preprints201809.0490.v1
Online: 25 September 2018 (15:43:11 CEST)
Background: Melatonin is a potent mitochondrial, cytoprotective and antioxidant molecule with potentially strong anti-aging properties. Topical melatonin has shown to improve the clinical signs of skin aging. Melatosphere™ is a new lipid-based delivery system able to improve stability and skin penetration of melatonin when used in topical formulations. No clinical studies, using objective instrumental data, are available so far regarding the positive effect of Melatosphere™ in improving wrinkles in women with mild-to-moderate skin aging. Study Aim: We evaluate, in an open prospective, evaluator-blinded trial, the effects on skin texture of 2 months treatment with a Melatosphere™ based cream. Subjects and Methods: 15 women aged >45 years with mild to moderate facial skin aging (Glogau score ≥2) participated in the trial, after their informed consent. An ANTERA 3D computer-assisted skin analysis evaluation for the assessment of coarse and fine wrinkles of the periorbital area and melanin content was performed at baseline and after two months of treatment. An evaluator-blinded Investigator Global assessment of skin elastosis, roughness, level of dyscromia, skin dryness and presence of actinic damage was also performed at the same time points using a 4-grade score from 0 (no sign) to 3 (severe sign). Results: At baseline the mean (SD) IGA score was 8.2(1.0). After 2 months the IGA score significantly decrease to 4.2(1.4) (49% reduction) (P=0.0007). ANTERA 3D evaluations showed a significant reduction in skin coarse and fine wrinkles volume in the target area of -31% and -18%, respectively. Melanin content was reduced significantly by -17%. Conclusion: Topical melatonin carried in Melatosphere improves in the short-term signs of skin aging evaluated clinically and by ANTERA 3D device in women with mild to moderate skin aging.
COMMUNICATION | doi:10.20944/preprints201809.0071.v1
Online: 4 September 2018 (15:02:50 CEST)
We demonstrated a new approach to the production of three-dimensional-coated patterns using liquid route. Metallic perovskite oxides were coated onto three-dimensional (3D) microstructured substrates with different aspect ratios. The success of the method relies on the solution viscosity monitored by adding viscous liquid. The process of oxide thin films consists in three steps: preparing the precursor solution, coating the solution by spin-coating process onto three-dimensional-Si substrates and post-annealing. The chemical solution 3D-coating is conformal.
ARTICLE | doi:10.20944/preprints202210.0178.v1
Subject: Materials Science, Other Keywords: Selective Laser Etching; 3D Laser Microfabrication; Crystals Microprocessing; Sapphire 3D structures; Femtosecond Laser Microprocessing
Online: 12 October 2022 (10:44:31 CEST)
Transparent and high-hardness materials have become the object of wide interest. Most notably, it concerns technical glasses and crystals. A notable example is a sapphire – one of the most rigid materials having impressive mechanical stability and good optical properties. Nonetheless, using this material for 3D micro-fabrication is not straightforward due to its brittle nature. On the microscale, selective laser etching (SLE) technology is an appropriate approach for such media. Therefore, we present our research on c-cut crystalline sapphire microprocessing by using femtosecond radiation-induced SLE. Here we demonstrate a comparison between different wavelength radiation (1030 nm, 515 nm, 343 nm) usage for modification inscription and various etchants (Hydrofloridic acid, Sodium Hydroxide, Potassium Hydroxide and Sulphuric and Phosphoric acid mixture) comparison. We show that regular SLE etchants such as Hydrofluoric acid or Potassium Hydroxide are unsuitable materials for selective sapphire laser etching. Meanwhile, a 78% sulphuric and 22% phosphoric acid mixture at 270°C temperature is a good alternative for this process. We present the changes in the material after the separate processing steps. Finally, a protocol for advanced sapphire structure formation and a few exemplary structures are presented.
ARTICLE | doi:10.20944/preprints201812.0120.v1
Subject: Engineering, Civil Engineering Keywords: Terrestrial photogrammetry, 3D reconstruction, Low-cost technology, 3D model, bundle adjustment, Agisoft PhotoScan, C2C
Online: 11 December 2018 (09:35:32 CET)
This paper analyses and evaluate the precision and the accuracy the capability of low-cost terrestrial photogrammetry by using many digital cameras to construct a 3D model of an object. To obtain the goal, a building façade has imaged by two inexpensive digital cameras such as Canon and Pentax camera. Bundle adjustment and image processing calculated by using Agisoft PhotScan software. Several factors will be included during this study, different cameras, and control points. Many photogrammetric point clouds will be generated. Their accuracy will be compared with some natural control points which collected by the laser total station of the same building. The cloud to cloud distance will be computed for different comparison 3D models to investigate different variables. The practical field experiment showed a spatial positioning reported by the investigated technique was between 2-4cm in the 3D coordinates of a façade. This accuracy is optimistic since the captured images were processed without any control points.
ARTICLE | doi:10.20944/preprints201809.0412.v1
Subject: Physical Sciences, Applied Physics Keywords: Additive-Manufacturing, 3D Printing, Glass-Ceramics, Nanoscale, Laser 3D lithography, SZ2080, Cristobalite, Zirconia, Nanocomposites, Calcination
Online: 20 September 2018 (13:52:10 CEST)
Fabrication of a true-3D inorganic ceramic with resolution down to nanoscale using sol-gel resist precursor is demonstrated. The method has an unrestricted free-form capability, control of the fill-factor, and high fabrication throughput. A systematic study of the proposed approach based on ultrafast laser 3D lithography of organic-inorganic hybrid sol-gel resin followed by a heat treatment enabled formation of inorganic amorphous and crystalline composites guided by the composition of the initial resin. The achieved resolution of 100 nm was obtained for 3D patterns of complex free-form architectures. Fabrication throughput of 50×103 voxels/s is achieved; voxel - a single volume element was recorded by a single pulse exposure. After a subsequent thermal treatment, ceramic phase was formed depending on the temperature and duration of the heat treatment as validated by Raman micro-spectroscopy. The X-ray diffraction (XRD) revealed a gradual emergence of the crystalline phases at higher temperatures with a signature of cristobalite SiO2, a high-temperature polymorph. Also, the tetragonal ZrO2 phase known for its high fracture strength was observed. This 3D nano-sintering technique is scalable from nano- to millimeter dimensions and opens a conceptually novel route for optical 3D nano-printing of various crystalline inorganic materials defined by an initial composition for diverse applications for microdevices in harsh physical and chemical environments and high temperatures.
REVIEW | doi:10.20944/preprints202111.0228.v1
Subject: Engineering, Control & Systems Engineering Keywords: Deep Learning; 3D Instance Segmentation; Datasets
Online: 12 November 2021 (14:56:14 CET)
Beyond semantic segmentation,3D instance segmentation(a process to delineate objects of interest and also classifying the objects into a set of categories) is gaining more and more interest among researchers since numerous computer vision applications need accurate segmentation processes(autonomous driving, indoor navigation, and even virtual or augmented reality systems…) This paper gives an overview and a technical comparison of the existing deep learning architectures in handling unstructured Euclidean data for the rapidly developing 3D instance segmentation. First, the authors divide the 3D point clouds based instance segmentation techniques into two major categories which are proposal based methods and proposal free methods. Then, they also introduce and compare the most used datasets with regard to 3D instance segmentation. Furthermore, they compare and analyze these techniques performance (speed, accuracy, response to noise…). Finally, this paper provides a review of the possible future directions of deep learning for 3D sensor-based information and provides insight into the most promising areas for prospective research.
ARTICLE | doi:10.20944/preprints201811.0437.v1
Subject: Materials Science, Nanotechnology Keywords: graphene; polystyrene; 3D graphene sponges; electrochemistry
Online: 19 November 2018 (09:39:17 CET)
Polystyrene as a thin film on arbitrary substrates or pellets form defective graphene films or powders that can be dispersed in water and organic solvents. The materials were characterized by visible absorption, Raman and X-ray photoelectron spectroscopy, electron and atomic force microscopy and electrochemistry. Raman spectra of these materials show the presence of the expected 2D, G and D peaks at 2750, 1590 and 1350 cm-1, respectively. The relative intensity of the G vs. the D peak is taken as a quantitative indicator of the density of defects in the G layer.
ARTICLE | doi:10.20944/preprints201810.0269.v1
Subject: Life Sciences, Cell & Developmental Biology Keywords: 3D models; cartilage; chondrocytes; osteoarthritis (OA)
Online: 12 October 2018 (12:19:01 CEST)
Osteoarthritis (OA) is a joint disease involving cartilage degeneration. This study aimed to compare properties of chondrocytes from less-affected (LA-Cartilage) and severely-affected (SA-Cartilage) of human OA articular cartilage. Based on Dougados classification, OA cartilage was classified into two groups; less-affected (Grade 0–1) and severely-affected (Grade 2–3). Chondrocytes from each group were cultured until passage (P) 4. Growth, migration, stem cell properties and chondrogenic properties under normal and inflammatory conditions, and the formation of in vitro 3D cartilage tissues were compared between groups. The growth and migratory properties of LA-chondrocytes and SA-chondrocytes were similar, except that the migration rate of SA-chondrocytes was significantly higher at P0 compared to LA-chondrocytes. Both LA-chondrocytes and SA-chondrocytes expressed mesenchymal stem cell markers and tri-lineage differentiation, but the expression of stem cell markers decreased significantly with increasing passage number. Exposure to inflammatory conditions induced distinct morphological changes and significant increases in expression of SOX9 at P4 and MMP3 at P1 for LA-chondrocytes. LA-chondrocytes and SA-chondrocytes able to develop into in vitro 3D constructs, but SA-chondrocytes exhibited superior cartilage-like properties. Chondrocytes from both less- and severely-affected regions are suitable to be used in clinical applications, however, chondrocytes from severely-affected regions could be a more favorable cell source.
ARTICLE | doi:10.20944/preprints201801.0293.v1
Online: 1 February 2018 (14:37:58 CET)
Numerical weather prediction is an initial-value problem, for determination of the initial conditions, there are many methods and one of the most classical methods is variational methods in three dimensions, or 3D-Var. In this approach, with a defined cost function proportional to the square of the distance between the analysis and both the background and the observations, one can obtain the analysis. In the cost function, the background and the observations are reshaped to vectors; within this step, the order of the background error covariance matrix and the observational error covariance matrix becomes huge, which is not convenient to one to obtain the analysis. In this paper, according to the matrix analysis approach, we put forward some possible improvements to the dimension-reduction algorithm of 3D-Var, so that provide some references for data assimilation.
ARTICLE | doi:10.20944/preprints202109.0112.v1
Subject: Engineering, Marine Engineering Keywords: 3D point Cloud Classification, 3D point Cloud Shape Completion,Auto-Encoders, Contrastive Learning, Self-Supervised Learning
Online: 6 September 2021 (18:00:28 CEST)
In this paper, we present the idea of Self Supervised learning on the Shape Completion and Classification of point clouds. Most 3D shape completion pipelines utilize autoencoders to extract features from point clouds used in downstream tasks such as Classification, Segmentation, Detection, and other related applications. Our idea is to add Contrastive Learning into Auto-Encoders to learn both global and local feature representations of point clouds. We use a combination of Triplet Loss and Chamfer distance to learn global and local feature representations. To evaluate the performance of embeddings for Classification, we utilize the PointNet classifier. We also extend the number of classes to evaluate our model from 4 to 10 to show the generalization ability of learned features. Based on our results, embedding generated from the Contrastive autoencoder enhances Shape Completion and Classification performance from 84.2% to 84.9% of point clouds achieving the state-of-the-art results with 10 classes.
ARTICLE | doi:10.20944/preprints202201.0288.v1
Subject: Earth Sciences, Geoinformatics Keywords: MV/LV network; GIS planning; Spatial network analysis; 3D virtual city; Web and 3D Web GIS applications
Online: 20 January 2022 (08:32:37 CET)
Electric energy has become essential nowadays not only for the daily life of each of us but also for the economy of different countries. The dissemination of geographic information plays an important role in national development as it facilitates communication between managers, investors, and consumers in this sector. Since the management of electricity network data was previously done in Tunisia based on paper maps and plans, the purpose of this article is to present a case of planning based on GIS, Web, and 3D Web GIS, which would have significant positive consequences on this sector from a technical and financial sides with an improvement in customer satisfaction and the creation of an intelligent electricity network which will be a real decision-making tool. This work draws up an inventory of the network MV (Medium Voltage)/LV (Low Voltage) of the region of Medjez El Bab which routes electricity to the big centers of consumption with access to MV/LV subscribers. The analysis of the network's impedance allowed carrying out different scenarios to optimize performance and obtain more realistic routes. Many thematic maps were produced as part of this project (Slope map, Land use map, map of the MV voltage domains, map of the MV/LV transformer stations power, etc.). A three-dimensional virtual city has been developed to visualize the graphical and attribute data for the study area. A Web and 3D Web GIS applications that allows the publication of the interactive maps on the Web as well as the database information have been developed to offer users the possibility of consulting the produced products by internet. Finally, a website related to the study was developed.
CONCEPT PAPER | doi:10.20944/preprints202111.0136.v1
Subject: Physical Sciences, Optics Keywords: laser 3D nanolithography; micro-optics; astrophotonics; 3D printing; additive manufacturing; SZ2080TM; hybrid materials; inorganics; imaging; high temperature.
Online: 8 November 2021 (13:04:13 CET)
A pilot study on laser 3D printing of inorganic free-form micro-optics is experimentally validated. Ultrafast laser nanolithography is employed for structuring hybrid organic-inorganic material SZ2080TM followed by high-temperature calcination post-processing. The combination allows production of 3D architectures and the heat-treatment results in converting the material to inorganic substance. The produced miniature optical elements are characterized and their optical performance demonstrated. Finally, the concept is validated for manufacturing compound optical components such as stacked lenses. This is opening for new directions and applications of laser made microoptics under harsh conditions such as high intensity radiation, temperature, acidic environment, pressure variations, which include open space, astrophotonics, and remote sensing.
ARTICLE | doi:10.20944/preprints202208.0108.v1
Subject: Engineering, Electrical & Electronic Engineering Keywords: Localization; Navigation; Smartphone; GNSS; 3D Building Models
Online: 4 August 2022 (08:56:12 CEST)
Smart health applications have received significant attention in recent years. Novel applications hold significant promise to overcome many of the inconveniences faced by persons with disabilities throughout daily living. For people with blindness and low vision (BLV), environmental perception is compromised, creating myriad difficulties. Precise localization is still a gap in the field and is critical to safe navigation. Conventional GNSS positioning cannot provide satisfactory performance in urban canyons. 3D mapping-aided (3DMA) GNSS may serve as an urban GNSS solution, since the availability of 3D city models has widely increased. As a result, this study developed a real-time 3DMA GNSS-positioning system based on state-of-the-art 3DMA GNSS algorithms. Shadow matching was integrated with likelihood-based ranging 3DMA GNSS, generating positioning hypothesis candidates. To increase robustness, the 3DMA GNSS solution was then optimized with Doppler measurements using factor graph optimization (FGO) in a loosely-coupled fashion. This study also evaluated positioning performance using an advanced wearable system’s recorded data in New York City. The real-time forward processed FGO can provide a root-mean-square error (RMSE) with about 21 m. The RMSE drops to 16 m when the data is post-processed with FGO in a combined direction. Overall results show that the proposed loosely-coupled 3DMA FGO algorithm can provide a better and more robust positioning performance for the multi-sensor integration approach used by this wearable for persons with BLV.
ARTICLE | doi:10.20944/preprints202207.0308.v1
Subject: Mathematics & Computer Science, Artificial Intelligence & Robotics Keywords: micro-video classification; 3D CNN; multi-modal
Online: 21 July 2022 (03:09:34 CEST)
Along with the popularity of the Internet, people are exposed to more and more ways of micro-videos, and a huge amount of micro-video data has emerged. micro-videos have gradually become the Internet content preferred by the public, and a large number of micro-video apps have also emerged, such as Tiktok and Kwai. Intelligent classification and mining of micro-videos can greatly enhance user experience, improve business operation efficiency and enhance user experience. Through deep intelligent analysis and mining of micro-videos, important information in micro-videos can be extracted to provide an important basis for beautifying videos, content appreciation, video recommendation, content search, etc. In the past, content understanding for short videos often used human work annotation, but in recent years, with the great success of deep convolutional neural networks in image recognition, short video content understanding based on this method has gradually developed. Nowadays, most recognition algorithms extract the feature representation of each frame independently and then fuse them. However, while extracting the feature representation, some low-level semantic features are lost, which makes the algorithm unable to accurately distinguish the category of the video. At present, the algorithm of micro-video recognition based on deep learning has surpassed the iDT algorithm, making these traditional methods fade out of people’s view. In this paper according to the micro-video classification task, a new network model is proposed to concatenate features of each modality into the overall features of various modalities through the network, and then fuse the various modal features with the attention mechanism to obtain the whole micro-video features, which will be used for classification. In order to verify the effectiveness of the algorithm proposed in this paper, experiments are conducted in the public dataset, and it is shown the effectiveness of our model.
ARTICLE | doi:10.20944/preprints202202.0157.v1
Subject: Mathematics & Computer Science, Numerical Analysis & Optimization Keywords: mathematical models; Table Curve 3D; correlation coefficient
Online: 11 February 2022 (08:35:16 CET)
This article describes the methodology used to identify the mathematical model that describes the correlations between the input parameters of an experiment and the parameters being followed. As a technological process, the aerodynamic separation was chosen, respectively, the behavior of a solid particle within an ascending vertical airflow. The experimental data obtained were used to identify two parameters, the average linear velocity, and the angular velocity, and through the Table Curve 3D program was developed a mathematical model which describes the dependence between the input parameters (the shape and size of the solid particle and the velocity of the airflow) and the monitored parameters. In order to determine a single mathematical equation that describes as accurately as possible the correlation between the input variables and those obtained, a pyramid-type analysis was designed. The determination of the mathematical equation started from the number of equations generated by the Table Curve 3D program, then the equations with a correlation coefficient greater than 0.85 were chosen, and finally, the common equations were identified. Respecting the working methodology was identified one equation which has for the average linear velocity a correlation coefficient r2 between 0.88-0.99 and 0.86-0.99 for the angular velocity.
ARTICLE | doi:10.20944/preprints202111.0450.v1
Subject: Earth Sciences, Atmospheric Science Keywords: Radar; precipitation; 3D-Var; data assimilation; WRF
Online: 24 November 2021 (10:11:16 CET)
Radar observation data with high temporal and spatial resolution are used in the data assimilation experiment to improve precipitation forecast of a numerical model. The numerical model considered in this study is Weather Research and Forecasting (WRF) model with double-moment 6-class microphysics scheme (WDM6). We calculated radar equivalent reflectivity factor using higher resolution WRF and compared with radar observations in South Korea. To compare the precipitation forecast characteristics of three-dimensional variational (3D-Var) assimilation of radar data, four experiments are performed based on different precipitation types. Comparisons of the 24-h accumulated rainfall with Automatic Weather Station (AWS) data, Contoured Frequency by Altitude Diagram (CFAD), Time Height Cross Sections (THCS), and vertical hydrometeor profiles are used to evaluate and compare the accuracy. The model simulations are performed with and with-out 3D-VAR radar reflectivity, radial velocity and AWS assimilation for two mesoscale convective cases and two synoptic scale cases. The radar data assimilation experiment improved the location of precipitation area and rainfall intensity compared to the control run. Especially, for the two convective cases, simulating mesoscale convective system was greatly improved.
ARTICLE | doi:10.20944/preprints202108.0477.v1
Subject: Engineering, Mechanical Engineering Keywords: 3D printing; surface roughness; powder bed fusion
Online: 24 August 2021 (21:43:29 CEST)
The initial stability after implantology is paramount to the survival of the dental implant and the surface roughness of the implant plays a vital role in this regard. The characterisation of surface topography is a complicated branch of metrology, with a huge range of parameters available. Each parameter contributes significantly towards the survival and mechanical properties of 3D-printed specimens. The purpose of this paper is to experimentally investigate the effect of surface roughness of 3D-printed dental implants and 3D-printed dogbone tensile samples under areal height (Ra) parameters, amplitude parameters (average of ordinates), skewness (Rsk) parameters and mechanical properties. During the experiment, roughness values were analysed and the results showed that the skewness parameter demonstrated a minimum value of 0.596%. The 3D-printed dental implant recorded Ra with a 3.4 mm diameter at 43.23% and the 3D-printed dental implant with a 4.3 mm diameter at 26.18%. Samples with a complex geometry exhibited a higher roughness surface, which was the greatest difficulty of additive manufacturing when evaluating surface finish. The results show that when the ultimate tensile stress (UTS) decreases from 968.35 MPa to 955.25 MPa, Ra increases by 1.4% and when UTS increases to 961.18 MPa, Ra increases by 0.6%. When the cycle decreases from 262142 to 137433, Ra shows that less than a 90.74% increase in cycle is obtained. For 3D-printed dental implants, the higher the surface roughness, the lower the mechanical properties, ultimately leading to decreased implant life and poor performance.
ARTICLE | doi:10.20944/preprints202005.0165.v1
Subject: Materials Science, Biomaterials Keywords: Bone; 3D Printing; halloysite; PLA Surface Functionalization
Online: 9 May 2020 (11:39:54 CEST)
Three-dimensional (3D) printing techniques have received considerable focus in the area of bone engineering due to its precise control in the fabrication of complex structures with customizable shapes, internal and external architectures, mechanical strength, and bioactivity. In this study, we design a new composition biomaterial consisting of polylactic acid (PLA), and halloysite nanotubes (HNTs) loaded with zinc nanoparticles (PLA+H+Zn). The hydrophobic surface of the 3D printed scaffold was coated with two layers of fetal bovine serum (FBS) on the sides and one layer of NaOH in the middle. Additionally, a layer of gentamicin was coated on the outermost layer against bacterial infection. Scaffolds were cultured in standard cell culture medium without the addition of osteogenic medium. This surface modification strategy improved material hydrophilicity and enhanced cell adhesion. Pre-osteoblasts cultured on these scaffolds differentiated into osteoblasts and proceeded to produce a type I collagen matrix and subsequent calcium deposition. 3D printed scaffolds formed from this composition possessed high mechanical strength and showed an osteoinductive potential. Furthermore, the external coating of antibiotics not only preserved the previous osteogenic properties of the 3D scaffold but also significantly reduced bacterial growth. Our surface modification model enabled the fabrication of a material surface that was hydrophilic and antibacterial, simultaneously, with an osteogenic property. The designed PLA+H+Zn may be a viable candidate for the fabrication of customized bone implants.
ARTICLE | doi:10.20944/preprints201810.0231.v1
Subject: Medicine & Pharmacology, Other Keywords: drug release; electrospinning; paclitaxel; polycaprolactone; 3D matrix
Online: 11 October 2018 (06:09:26 CEST)
Paclitaxel is a natural, highly lipophilic anti proliferative drug widely used in medicine. We have studied the release of tritium-labeled paclitaxel (3H-PTX) from matrices destined for the coating of vascular stents and produced by the electrospinning method from the solutions of polycaprolactone (PCL) with paclitaxel (PTX) in hexafluoisoropropanol (HFIP) and/or solutions of PCL with PTX and human serum albumin (HSA) in HFIP or HIFP-dimethyl sulphoxide (DMSO) blend. The release of PTX has been shown to depend on the solvent and the composition of electrospinning solution, as well as the composition of the surrounding medium, particularly the concentration of free PTX and PTX-binding biomolecules present in human serum. It was shown that 3D matrices can completely release PTX without weight loss. Two-phase PTX release from optimized 3D matrices was obtained: ~27% of PTX was released in the first day, another 8% were released over the next 26 days. Wherein ~2.8%, ~2.3%, and ~0.25% of PTX was released on day 3, 9, and 27, respectively. Considering PTX toxicity, the rate of its diffusion through the arterial wall, and the data obtained the minimum cytostatic dose of the drug in the arterial wall will be maintained for at least three months.
REVIEW | doi:10.20944/preprints201806.0292.v1
Subject: Engineering, Biomedical & Chemical Engineering Keywords: 3D printing; diagnostics; optics; bioprinting, electronics, microfluidics
Online: 19 June 2018 (10:41:57 CEST)
AbstractWhile the technology is relatively new, low cost 3D printing has impacted many aspects of human life. 3D printers are being used as manufacturing tools for a wide variety of devices in a spectrum of applications ranging from diagnosis to implants to external prostheses. The ease of use and availability of 3D design software and low cost has made 3D printing an accessible manufacturing and fabrication tool in many research laboratories. 3D printers can print materials with varying density, optical character, strength and chemical properties providing platforms for a huge number of strategies that can be chosen for user’s needs. In this review, we focus on applications in biomedical diagnostics and how this revolutionary technique is facilitating development of low cost, sensitive and often geometrically complex tools. 3D printing in fabrication of microfluidics, supporting equipment, optical and electronic components of diagnostic devices is presented. Emerging diagnostic 3D bioprinting as a tool to incorporate living cells or biomaterials into 3D printing is also discussed.
ARTICLE | doi:10.20944/preprints202012.0541.v1
Subject: Materials Science, Biomaterials Keywords: 3D printing; biomimetic; poly (lactic acid); spheroids; bone repair; 3D printed scaffold; bone morphogenetic protein 2; biomimetic apatite.
Online: 21 December 2020 (16:48:39 CET)
This study aimed to assess the response of 3D printed PLA scaffolds biomimetically coated with apatite on human primary osteoblast spheroids and evaluate the biological response to its association with Bone Morphogenetic Protein 2 (rhBMP-2) in rat calvaria. PLA scaffolds were produced via 3D printing, soaked in simulated body fluid (SBF) solution, and characterized by physical-chemical, morphological, and mechanical properties. The in vitro biological response was assessed with human primary osteoblast (HOb) spheroids. The in vivo analysis was conducted through the implantation of 3D printed PLA scaffolds either alone, covered by apatite (PLA-CaP) or PLA-CaP loaded with rhBMP-2 (PLA-CaP+rhBMP-2) on critical-sized defects (8 mm) of rat calvaria. Increased cell adhesion and in vitro release of growth factors (PDGF, bFGF, VEGF) was observed for PLA-CaP scaffolds when pre-treated with FBS. PLA-CaP+BMP2 presented higher values of newly formed bone (NFB) than other groups at all experimental periods (p<0.05), attaining 44.85% of NFB after 6 months. These findings indicate that functionalization of PLA scaffolds with biomimetic apatite can improve its biological properties in the presence of complex biological media. Its association with BMP2 may enhance bone repair, suggesting this strategy as a promising candidate for bone tissue engineering.
ARTICLE | doi:10.20944/preprints202011.0054.v1
Subject: Medicine & Pharmacology, Allergology Keywords: 3D printing; semi-solid extrusion 3D printing; additive manufacturing; extemporaneous manufacturing; drug delivery; personalized dosage forms; veterinary medicine; prednisolone
Online: 2 November 2020 (14:59:30 CET)
Currently, the number of approved veterinary medicines are limited, and human medications are used off-label. These approved human medications are of too high potencies for a cat or a small dog breed. Therefore, there is a dire demand for smaller doses of veterinary medicines. This study aims to investigate the use of three semi-solid extrusion 3D printers in a pharmacy or animal clinic setting for extemporaneous manufacturing of prednisolone containing orodispersible films for veterinary use. Orodispersible films with adequate content uniformity and acceptance values defined by the European Pharmacopoeia was produced with one of the studied printers, namely, the Allevi 2 bioprinter. Smooth and flexible films, with high mechanical strength, neutral pH, and low moisture content were produced with high correlation between prepared design and obtained drug amount, indicating that the Allevi 2 printer could successfully be used to extemporaneously manufacture personalized doses for animals at the point-of-care.
ARTICLE | doi:10.20944/preprints201812.0119.v1
Subject: Physical Sciences, Applied Physics Keywords: 3D nano-lithography, 3D laser lithography, direct laser writing, nanopolymerization, cross-linking, multi-photon absorption, avalanche ionization, temperature effects
Online: 11 December 2018 (09:31:31 CET)
Direct laser writing three-dimensional nano-lithography is an established technique for manufacturing functional 3D micro- and nano-objects via non-linear absorption induced polymerization process. In this Chapter an underlying physical mechanisms taking place during nano-confined polymerization reaction, induced by tightly focused ultra-short laser pulses, are reviewed and discussed. The special attention is paid on the effects that directly impact structuring resolution and minimum achievable feature size. Analysis of possible photo-initiation mechanisms as contributing multi-photon absorption and avalanche ionization in pre-polymers under diverse exposure conditions (wavelength, pulse duration) is presented. Feasible structuring of pure (non-photosensitized) and functional nanoparticles doped polymer precursors is justified and benefits of such materials/structures for microoptics, photonics and cell scaffolds are highlighted. The influence of temperature effects (induced by writing process itself or determined by ambient conditions) on polymerization process, observed in different pre-polymers under diverse exposure regimes is outlined. The further adjustment of the structuring resolution is possible via precise control of light polarization and diffusion assisted radical quenching. The work is concluded with a brief outlook on future challenges and perspectives related to refinement of 3D ultra-fast laser lithography fabrication process in the means of application of diverse post-processing methods and research into novel photo-curable materials including inorganic ones.
ARTICLE | doi:10.20944/preprints201810.0384.v1
Subject: Physical Sciences, Applied Physics Keywords: direct laser writing, multiphoton processing, laser 3D nanolithography, optical 3D printing, microstructures, nanotechnology, mesoscale, two-photon polymerization, microoptics, SZ2080
Online: 17 October 2018 (11:26:32 CEST)
3D meso-scale structures that can reach up to centimeters in overall size but retain micro- or nano-features, proved to be promising in various science fields ranging from micro-mechanical metamaterials to photonics and bio-medical scaffolds. In this work we present synchronization of the linear and galvano scanners for efficient femtosecond 3D optical printing of objects at the meso-scale (from sub-μm to sub-cm spanning five orders of magnitude). In such configuration the linear stages provide stitch-free structuring at nearly limitless (up to tens-of-cm) working area, while galvo-scanners allow to achieve translation velocities in the range of mm/s-cm/s without sacrificing nano-scale positioning accuracy and preserving undistorted shape of the final print. The principle behind this approach is demonstrated, proving its inherent advantages in comparison to separate use of only linear stages or scanners. The printing rate is calculated in terms voxels/s, showcasing the capability to maintain an optimal feature size while increasing throughput. Full capabilities of this approach are demonstrated by fabricating structures that reach millimeters in size but still retain μm-scale features: scaffolds for cell growth, microlenses and photonic crystals. All this is combined into a benchmark structure: a meso-butterfly. Provided results show that synchronization of two scan modes is crucial for the end goal of industrial-scale implementation of this technology and makes the laser printing well aligned with similar approaches in nanofabrication by electron and ion beams.
ARTICLE | doi:10.20944/preprints202209.0288.v1
Subject: Life Sciences, Virology Keywords: COVID-19; Therapeutics; Drug Repurposing; 3D Tissue Models
Online: 20 September 2022 (03:24:22 CEST)
The repurposing of licenced drugs for use against COVID-19 is one of the most rapid ways to develop new and alternative therapeutic options to manage the ongoing pandemic. Given the approximately 8,000 licenced compounds available from Compounds Australia that can be screened, this paper demonstrates the utility of commercially-available ex vivo/3D airway and alveolar tissue models. These models are a closer representation of in vivo studies compared to in vitro models, but retain the benefits of rapid in vitro screening for drug efficacy. We demonstrate that several existing drugs appear to show anti-SARS-CoV-2 activity against both Delta and Omicron Variants of Concern in the airway model. In particular, fluvoxamine, as well as aprepitant, everolimus, and sirolimus have virus reduction efficacy comparable to the current standard of care (remdesivir, molnupiravir, nirmatrelvir). Whilst these results are encouraging, further testing and efficacy studies are required before clinical use can be considered.
ARTICLE | doi:10.20944/preprints202206.0171.v1
Subject: Engineering, Mechanical Engineering Keywords: soft robot; pneumatic drive; soft gripper; 3D printing
Online: 13 June 2022 (08:09:27 CEST)
The soft robot has many degrees of freedom, strong environmental adaptability and good human-computer interaction ability. As the end-effector of the soft robot, the soft gripper can grasp objects of different shapes without destructivity. Based on the theoretical analysis of the soft robot, the kinematics model of the flexible gripper and the theoretical model of the bending deformation of the air cavity were established. Accordingly, the relationship between the bending angle of the soft gripper and the air pressure was determined. Through the application of finite element software, the bending degree of pneumatic network multi-cavity soft gripper was simulated by finite element software, and the influence of structural parameters of soft actuator on bending deformation was determined. In addition, with the 3D technology conducting the printing of soft gripper fixtures and molds, the injection molding the actuator and the human-computer interaction interface controlling the movement of the gripper, the adaptability of the soft gripper in grasping object was verified. The result shows that the software gripper possesses good flexibility and can better grasp objects of different shapes.
ARTICLE | doi:10.20944/preprints202112.0487.v1
Subject: Earth Sciences, Geoinformatics Keywords: 3D City Model; CityGML 2.0; Spatial Data Integration
Online: 30 December 2021 (12:51:35 CET)
3D city models integrate heterogeneous urban data from multiple sources in a unified geospatial representation, combining both semantics and geometry. Although in the last decades, they are predominantly used for visualization, today they are used in a large range of tasks related to exploration, analysis, and management across multiple domains. The complexity of urban processes and the diversity of urban environment bring challenges to the implementation of 3D city models. To address such challenges, this paper presents the development process of a 3D city model of a single neighborhood in Sofia city based on CityGML 2.0 standard. The model represents the buildings in LOD1 with a focus on CityGML features of related to the buildings like building part, terrain intersection curve and address. Similar building models of 18 cities provided as open datasets are explored and compared in order to extract good modeling practices. As a result, workflows for generation of 3D building models in LOD1 are elaborated and improvements in the feature modeling are proposed. Two options of building model are examined: modeling of a building as a single solid and modeling of a building with separate building parts. Finally, the possibilities for visualization of the model in popular platforms such as ArcGIS Pro and Cesium Ion are explored.
REVIEW | doi:10.20944/preprints202111.0389.v1
Subject: Materials Science, Biomaterials Keywords: 3D Bioprinting; Extracellular Matrix; Extrusion; Biomaterials; Tissue Engineering
Online: 22 November 2021 (12:26:49 CET)
There is need to address the challenges of organ shortage, through development of tissues and organs with alternatives to those of the allograft-kind. This illustrates the quest behind novel biofabrication strategies such as 3D bio-printing, which is necessary to create artificial multi-cellular tissues/organs. Several findings have been reported in this review. First, the role of ECM components in tissue regenerative medicine is presented. Different ECM components such as collagen, gelatin, elastin, fibronectin, laminins and glycosaminoglycans are concisely examined for their tissue regenerative medicine applications. Next, current state of research on extrusion-based 3D bio-printing techniques and their limitations are reviewed. For example, we show that cell viability is still a challenge with extrusion, while the use of natural polymers such as collagen in improving composites’ mechanical properties is limited. Lastly, we examine unresolved research questions necessary to advance the present state of research in the field.
REVIEW | doi:10.20944/preprints202107.0321.v1
Subject: Engineering, Automotive Engineering Keywords: Cancer cachexia, muscle atrophy, tissue regeneration, 3D bioprinting
Online: 14 July 2021 (11:20:17 CEST)
Cancer cachexia is a multifactorial syndrome that is identified by ongoing muscle atrophy, along with functional impairment, anorexia, weakness, fatigue, anemia, reduced tolerance to antitumor treatments. Thus, reducing the patients’ quality of life. Cachexia alone causes about 22-25% of cancer deaths. This review covers the symptoms, mediators, available treatment, and prospects of 3D bioprinting for cancer cachexia. Studies about cachexia have shown several factors that drive this disease – protein breakdown, inflammatory cytokines activation, and mitochondrial alteration. Even with proper nutrition, physical exercises, anti-inflammatory agents, chemotherapy, and grafting attempts, standard treatment has been unsuccessful for cachexia. But the use of 3D bioprinting shows much promise compared to conventional methods by attempting to fabricate 3D constructs mimicking the native muscle tissues. In this review, some 3D bioprinting techniques with their advantages and drawbacks, along with their achievements and challenges in in-vivo applications have been discussed. Constructs with neural integration or muscle-tendon units aim to repair muscle atrophy. But it is still difficult to properly bio-print these complex muscles. Although progress can be made by developing new bio-inks or 3D printers to fabricate high-resolution constructs. Using secondary data, this review study shows prospects of why 3D bioprinting can be a good alternate approach to fight cachexia.
ARTICLE | doi:10.20944/preprints202106.0699.v1
Subject: Biology, Anatomy & Morphology Keywords: pollen, pollen classes, determination, 3D, laser scanning microscopy
Online: 29 June 2021 (11:45:54 CEST)
Pollen analysis as a part of palynology deals with the morphological determination of pollen and spores. Different technologies with different resolutions varying from simple light microscopy to highly elaborate electron microscopy are used for the examination, depending on the area of application (e.g. sedimentology, melissopalynology, forensic palynology, etc.). To answer the question of whether laser scanning microscopy (LSM) can replace scanning electron microscopy (SEM) for the determination of pollen species, 168 species were examined using LSM. It was concluded that LSM is both efficient and easy to handle. After preparing the fresh pollen, a 3D laser scan takes 5-10 minutes and unlike using SEM, the pollen does not have to be sputtered or processed. The 3D scans can be measured quickly and easily with the integrated software and there were no observable artifacts. At magnifications up to 8545x, the image quality is comparable to that of a sputtered SEM sample whereas at higher magnifications, the SEM method is superior. Overall, pollen display by LSM is much less time consuming and more cost effective than with the SEM method.
ARTICLE | doi:10.20944/preprints202106.0264.v1
Subject: Materials Science, Biomaterials Keywords: PEGDA Hydrogels; 3D recognition; diffusion; strand displacement assay.
Online: 9 June 2021 (11:45:54 CEST)
The control of the three-dimensional (3D) polymer network structure is important for permselective materials when specific biomolecules detection is needed. Here we investigate conditions to obtain a tailored hydrogel network that combine both molecular filtering and molecular capture capabilities for biosensing applications. Along this line short oligonucleotide detection in a displacement assay is set within PEGDA hydrogels synthetized by UV radical photopolymerization. To provide insights on the molecular filter capability, diffusion studies of several probes (sulforhodamine G and dextrans) with different hydrodynamic radii were carried out using NMR technique. Moreover, fluorometric analyses of hybridization of DNA oligonucleotides inside PEGDA-hydrogels shed light on the mechanisms of recognition in 3D, highlighting that mesh size and crowding effect greatly impact of hybridization mechanism onto polymer network. Finally, we found the best probe density and diffusion transport conditions to allow the specific oligonucleotide capture and detection inside PEGDA-hydrogels for oligonucleotide detection and the filtering out of higher molecular weight molecules.
REVIEW | doi:10.20944/preprints202105.0352.v1
Subject: Life Sciences, Biochemistry Keywords: 3d printing; microscopy; open-source; optics; super-resolution
Online: 14 May 2021 (16:10:24 CEST)
The maker movement has reached the optics labs, empowering researchers to actively create and modify microscope designs and imaging accessories. 3D printing has especially had a disruptive impact on the field, as it entails an accessible new approach in fabrication technologies, namely additive manufacturing, making prototyping in the lab available at low cost. Examples of this trend are taking advantage of the easy availability of 3D printing technology. For example, inexpensive microscopes for education have been designed, such as the FlyPi. Also, the highly complex robotic microscope OpenFlexure represents a clear desire for the democratisation of this technology. 3D printing facilitates new and powerful approaches to science and promotes collaboration between researchers, as 3D designs are easily shared. This holds the unique possibility to extend the open-access concept from knowledge to technology, allowing researchers from everywhere to use and extend model structures. Here we present a review of additive manufacturing applications in microscopy, guiding the user through this new and exciting technology and providing a starting point to anyone willing to employ this versatile and powerful new tool.
ARTICLE | doi:10.20944/preprints202101.0119.v1
Subject: Engineering, Automotive Engineering Keywords: Lab-on-a-disk; 3D microstructure; FLISA; VEGF
Online: 6 January 2021 (14:20:00 CET)
Fluorescence-linked immunosorbent assay (FLISA) is a commonly used, quantitative technique for detecting biochemical based on antigen–antibody binding reactions using a well-plate platform. With the developments in the manufacturing technology of microfluidic systems, FLISA can be implemented onto microfluidic disk platforms, which allows the detection of trace biochemical with high resolutions. Apart from requiring a lower proportion of reagent (1/10), this method also reduces the time required for the entire process to less than an hour. The incubation process involves antigen–antibody binding reactions as well as the binding of fluorogenic substrates to target proteins. The protocol for FLISA on a microfluidic platform necessitates the appropriate execution of liquid reagent movements during each step in order to ensure sufficient binding reactions. Herein, we propose a novel microfluidic disk comprising a 3D incubation chamber. Vascular endothelial growth factor as concentration with ng mL-1 is detected sequentially using a benchtop process employing this 3D microfluidic disk. The 3D microfluidic disk is implemented without requiring manual intervention or additional procedures for liquid control. During the incubation process, microbead movement is controlled through centrifugal force, generated due to disk rotation, and gravitational force via bead sedimentation on the sloped floor of the chamber.
ARTICLE | doi:10.20944/preprints202008.0573.v1
Subject: Engineering, Mechanical Engineering Keywords: 3D printing; stainless steel; microstructure; mechanical properties; simulation
Online: 26 August 2020 (09:18:37 CEST)
Metal 3D printing technology is a promising manufacturing method, especially in the case of complex shapes. The quality of the printed product is still a challenging issue for mechanical applications. The anisotropy of the microstructure, imperfections, and residual stress are some of the issues that diminish the mechanical properties of the printed sample. The simulation could be used to investigate some technical details, and this research has tried to computationally study the metal 3D printing of austenitic stainless steel to address austenite microstructure and local yield strength. Two computational codes were developed in Visual basics 2015 to simulate the local heating/cooling curve and subsequent austenite microstructure. A stochastic computational code was developed to simulate austenite grain morphology based on calculated thermal history. Then Hall-Pitch equation was used to estimate the yield strength of the printed sample. These codes were used to simulate the effect of temperature of the printer’s chamber on microstructure and subsequent yield strength. The austenite grain topology is more columnar at a lower temperature. The percentage of the equiaxed zone will be increased at a higher chamber’s temperature. Almost a fully equiaxed austenite microstructure will be achieved at 800 C chamber’s temperature, but the last printed layer, which is columnar and can be removed by cutting then. The estimated local austenite grain size and the local yield strength in the equiaxed regions are in the range of 15 to 30 μm and 270 to 330 MPa at 800 C temperature of printer’s chamber, respectively.
BRIEF REPORT | doi:10.20944/preprints202006.0328.v1
Subject: Earth Sciences, Environmental Sciences Keywords: INSAT 3D; INSAT 3DR; Surface insolation; Solar resource
Online: 28 June 2020 (09:19:10 CEST)
Solar Insolation is the major contributor of earth’s radiation and energy budget. The insolation reaching the surface is a prime input for eco-physiological processes such as evapotranspiration and photosynthesis. Therefore, it is as critical component to assess bio-energy and bio-fuel resources. It is also a crucial input to crop simulation model for yield forecasting and its further applications in solar energy solutions. Although ground observations are better for accuracy purpose, they have challenges of maintenance, regular calibration and upkeeping etc. This call for the continuous spatio-temporal satellite based observations barring the acceptable accuracy. In case of INSAT3D/3DR, Bhattacharya et al. (2015) have derived the surface insolation product which is being used widely. We propose a method of improvement in this product. It is envisaged that a correction applied with the help of ground truth estimates may enhance the utilization of insolation products derived from INSAT3D/3DR datasets. In the present study, surface insolation product derived from INSAT 3D/3DR data at an interval of 30 minutes each (collectively 15 minutes interval) with 4 km spatial resolution was used for duration from May-2017 to Apr-2019 over Nagpur. Ground truth observations for same duration were carried out with CNR4, which were used to correct the INSAT 3D/3DR surface insolation product using the statistical best-fit method. Corrected INSAT 3D/3DR products are found correlating with the ground values well with differences of approximately < 1 W/m2. Best-fit parameters evolved in the present study uses only 2 years of simultaneous ground and satellite data which can be further improved by multi-year data base. We propose better utilization of INSAT 3D/3DR based surface insolation products in the assessment of solar resource mapping over Nagpur (and possibly other regions, such as Bhandara) with the help of best-fit parameters as assessed in the present study.
ARTICLE | doi:10.20944/preprints202005.0062.v1
Subject: Materials Science, Biomaterials Keywords: Wood-filled PLA; Thermal Decomposition; Starch; 3D printing
Online: 5 May 2020 (05:44:47 CEST)
Dynamic thermogravimetric (TG) analysis under nitrogen environment was used to understand the thermal decomposition process of 3D printing filaments made of wood-filled polylactic acid (PLA)/starch blend. The characteristic temperatures and apparent activation energy (AAE) of the filaments with various starch contents were calculated with well-known kinetic models by Friedman, Flynn-Wall-Ozawa, Coats-Redfern and Kissinger. With the increased starch content in the filament, the onset thermal decomposition temperatures of the filaments decreased gradually from 272.4 to 155.1°C. The thermal degradation degree became smaller, and the transitional temperature interval became larger with increased starch proportion. The AAE values of the three types of filaments with different starch ratios varied between 97 kJ/mol and 114 kJ/mol, depending on material composition and method of calculation. The improved understanding of thermal decomposition behavior of PLA-starch-wood composites can help develop more biodegradable PLA/starch-based filaments for 3D printing.
ARTICLE | doi:10.20944/preprints202001.0160.v1
Subject: Life Sciences, Virology Keywords: rabies; uDISCO; 3D imaging; rabies pathogenicity; astrocyte infection
Online: 16 January 2020 (08:52:30 CET)
Although conventional immunohistochemistry for neurotropic Rabies virus (RABV) usually shows a high preference for neurons, non-neuronal cells are also potential target cells and abortive infection of astrocytes is considered a main trigger of innate immunity in the CNS. While in vitro studies indicated differences between field and less virulent lab-adapted RABVs, a systematic and quantitative comparison of astrocyte tropism in vivo is lacking. Here, a recently developed solvent-based tissue clearing technique was used to measure the RABV cell tropism in infected brains. Immunofluorescence analysis of 1 mm-thick tissue slices enabled 3D segmentation and quantification of infection frequencies of astrocytes and neurons. Comparison of highly virulent street virus clones from fox, dog, and raccoon with three lab strains of intermediate and low virulence revealed remarkable differences in the ability to infect astrocytes in vivo. While all viruses and infection routes led to comparable neuron infection frequencies, striking differences were detected for the infection of astrocytes. Consistent and inoculation route-independent astrocyte infection by field viruses, together with route-dependent or undetectable astrocyte infection by lab-adapted or vaccine viruses strongly suggests a model in which the ability to establish productive astrocyte infection in vivo functionally distinguishes field and attenuated lab RABV strains.
ARTICLE | doi:10.20944/preprints201812.0089.v1
Subject: Materials Science, Metallurgy Keywords: Sigma Phase, Contiguity, Kinetics, Cahn models, 3D Reconstruction
Online: 6 December 2018 (16:14:18 CET)
Duplex Stainless Steels (DSS) and Superduplex Stainless Steels (SDSS) are an important class of stainless steels because they combine the benefits of austenite and ferrite phases, resulting in steels with better mechanical properties and higher corrosion resistance. Due to these characteristics are widely employed in various industries. However, the appearance of deleterious phases in their microstructure impairs the properties of DSS and SDSS. Among the deleterious phases, the main one is the sigma phase (σ), which can be nucleated when the steel is exposed to the temperature range between 650 °C and 900 °C, reducing its toughness and resistance to corrosion. In a previous work, Fonseca and collaborators used two descriptors of the microstructural path to analyze the formation of sigma phase (σ), SV, interfacial area per unit volume between sigma phase and austenite, and <λ>, mean chord length of sigma, both in function of the VV, volume fraction of sigma, known in the literature as microstructural partial path (MP). In this work, the contiguity ratio is applied for the first time to describe the microstructural path in the study of sigma phase precipitation in SDSS. The contiguity ratio showed that the distribution of the ferrite/sigma boundaries is homogeneous. Thus, it is reasonable to infer that one has a uniform distribution of sigma phase nuclei within the ferrite. About the kinetics of sigma phase formation, the DSS can be described by the classical JMAK equation, whereas for the SDSS, the kinetics tends to follow the Cahn model for grain edge nucleation. Finally, we present the 3D reconstruction of the sigma phase in SDSS. The results demonstrate that the sigma phase nucleates at the edges of the ferrite/austenite interfaces. Moreover, the sigma phase grows consuming the ferrite, but it is not fully interconnected.
ARTICLE | doi:10.20944/preprints201808.0441.v1
Subject: Engineering, Civil Engineering Keywords: digital construction; 3D-concrete-printing; buildabiltiy; additive manufacturing
Online: 27 August 2018 (06:37:13 CEST)
Buildability, i.e. the ability of a deposited material bulk to retain its dimmensions under increasing load, is an inherent prerequisite for formwork-free digital construction (DC). Since DC processes are relatively new, no standard methods of characterization are available yet. The paper at hand presents practice-oriented buildabilty criteria by taking various process parameters and construction costs into consideration. In doing so, direct links between laboratory buildability tests and target applications are established. A systematic basis for calculating the time interval (TI) to be followed during laboratory testing is proposed for the full-width printing (FWP) and filament printing (FP) processes. The proposed approach is validated by applying it to a high-strength, printable, fine-grained concrete. Comparative analyses of FWP and FP revealed that to test the buildability of a material for FP processes, higher velocities of the printhead should be established for laboratory tests in comparison to those needed for FWP process, providing for equal construction rates.
ARTICLE | doi:10.20944/preprints201807.0611.v1
Subject: Materials Science, Biomaterials Keywords: hydrogels; cardiac patches; 3D bioprinting; furfuryl-gelatin; lattice
Online: 31 July 2018 (08:06:27 CEST)
3D bioprinting holds great promise in the field of regenerative medicine as it can create complex structures in a layer-by-layer manner using cell-laden bioinks, making it possible to imitate native tissues. Current bioinks lack both the high printability and the biocompatibility required in this respect. Hence, the development of bioinks that are capable of both properties is needed. In our previous study, a furfuryl-gelatin based bioink, crosslinkable by visible light, was used for creating mouse mesenchymal stem cell-laden structures with high fidelity. In this study, lattice mesh geometries were printed in a comparative study to test against the properties of a traditional rectangular-sheet. After 3D printing and crosslinking, both structures were analysed for swelling and rheological properties, and their porosity estimated using scanning electron microscopy. Results showed that the lattice structure was relatively more porous but sturdy and exhibited a lower degradation rate compared to the rectangular-sheet. Further, the lattice allowed encapsulation of a greater number of cells, allowing them to proliferate to a greater extent compared to the rectangular-sheet that retained a lesser number of cells initially. All of these results collectively affirmed that the lattice poses as a superior scaffold design for tissue engineering applications.
ARTICLE | doi:10.20944/preprints201807.0288.v1
Subject: Materials Science, Biomaterials Keywords: calcium phosphate cement; methylcellulose; 3D plotting; support; hydroxyapatite
Online: 16 July 2018 (12:55:42 CEST)
3D plotting is an additive manufacturing technology enabling biofabrication, thus the integration of cells or biologically sensitive proteins or growth factors into the manufacturing process. However, most (bio-)inks developed for 3D plotting were not shown to be processed into clinical relevant geometries comprising critical overhangs and cavities, which would collapse without a sufficient support material. Herein, we have developed a support hydrogel ink based on methylcellulose (mc), which is able to act as support as long as the co-plotted main structure is not stable. Therefore, 6 w/v %, 8 w/v % and 10 w/v % mc were allowed to swell in water, resulting in viscous inks, which were characterized for their rheological and extrusion properties. The successful usage of 10 w/v % mc as support ink was proven by multichannel plotting of the support together with a plottable calcium phosphate cement (CPC) acting as main structure. CPC scaffolds displaying critical overhangs or a large central cavity could be plotted accurately with the newly developed mc support ink. The dissolution properties of mc allowed complete removal of the gel without residuals, once CPC setting was finished. Finally, we fabricated a scaphoid bone model by computed tomography data acquisition and co-extrusion of CPC and the mc support hydrogel.
ARTICLE | doi:10.20944/preprints201806.0215.v1
Subject: Chemistry, Electrochemistry Keywords: Copper; Phosphoric acid; 3D Nanostructures; 1-dodecanethiol SAMs
Online: 13 June 2018 (15:33:35 CEST)
A novel and simple method to improve the corrosion resistance of copper by constructing a 3D 1-dodecanethiol self-assembled monolayers (SAMs) in 3.5% NaCl solution is reported in this study. Several drops of 1% H3PO4 solution are thinly and uniformly distributed on copper surface to form a 3D nanostructure constituted by Cu3(PO4)2 nanoflowers. The anticorrosion properties of 1-dodecanethiol SAMs on copper surface and on copper surface treated with H3PO4 solution were evaluated. Results demonstrated that 1-dodecanethiol SAMs on bare copper surface exhibit good protection capacity, whereas a copper surface pretreated with H3PO4 solution can substantially enhance the corrosion resistance of 1-dodecanethiol SAMs.
ARTICLE | doi:10.20944/preprints201803.0151.v2
Subject: Medicine & Pharmacology, Oncology & Oncogenics Keywords: 3D culture; multiple myeloma; STAT; bortezomib; CETSA; stattic
Online: 8 June 2018 (13:32:11 CEST)
Malignant cells cultured in three-dimensional (3D) models have been found to be phenotypically and biochemically different from their counterparts cultured conventionally. Since most of these studies employed solid tumor types, how 3D culture affects multiple myeloma (MM) cells is not well understood. Here, we compared MM cells (U266 and RPMI8226) in a 3D culture model with those in conventional culture. While the conventionally cultured cells were present in single cells or small clusters, MM-3D cells grew in large spheroids. We discovered that STAT3 was the pathway that was more activated in 3D in both cell lines. The active form of STAT3 (phospho-STAT3 or pSTAT3), which was absent in MM cells cultured conventionally, became detectable after 1-2 days in 3D culture. This elevated pSTAT3 level was dependent on the 3D environment, since it disappeared after transferring to conventional culture. STAT3 inhibition using a pharmacological agent, Stattic, significantly decreased the cell viability of MM cells and sensitized them to bortezomib in 3D culture. Using an oligonucleotide array, we found that 3D culture significantly increased the expression of several known STAT3 downstream genes implicated in oncogenesis. Since most primary MM tumors are naturally STAT3-active, studies of MM in 3D culture can generate results that are more representative of the disease.
REVIEW | doi:10.20944/preprints201801.0240.v1
Subject: Biology, Other Keywords: epoxyqinomicin; DHMEQ; metastasis; invasion; adhesion; 3D cell culture
Online: 25 January 2018 (10:27:11 CET)
We previously designed and synthesized dehydroxyepoxyquinomicin (DHMEQ) as an inhibitor of NF-κB based on the structure of microbial secondary metabolite epoxyquinomicin C. DHMEQ showed anti-inflammatory and anticancer activity in various in vivo disease models without toxicity. Cell detachment from the primary tumor and subsequent invasion are considered to be early phase of metastasis, while tumor cell attachment to the tissue and secondary tumor formation the late phase. The assay system for late phase was set up with intra-portal-vein injection of pancreatic cancer cells. Administration of DHMEQ was found to inhibit the liver metastasis possibly by decreasing the expression of MMP-9 and IL-8. Also when the pancreatic cancer cells treated with DHMEQ was inoculated into the peritoneal cavity of mice, the metastatic foci formation was inhibited. These results indicate that DHMEQ is likely to inhibit the late phase of metastasis. Meanwhile, we have recently employed three-dimensional (3D) culture of breast cancer cells for the model of early phase metastasis. DHMEQ inhibited the 3D invasion of breast cancer cells without toxicity. In this way, DHMEQ was shown to inhibit the late and early phases of metastasis. Thus, DHMEQ is likely to be useful for the suppression of cancer metastasis.
ARTICLE | doi:10.20944/preprints201711.0181.v3
Subject: Engineering, Industrial & Manufacturing Engineering Keywords: 3D printing; open source; RepRap; calibration; bed levelling
Online: 12 January 2018 (07:35:31 CET)
Inexpensive piezoelectric diaphragms can be used as sensors to facilitate both nozzle height setting and build platform leveling in FFF (Fused Filament Fabrication) 3D printers. Tests simulating nozzle contact are conducted to establish the available output and an output of greater than 8 Volts found at 20 ºC, a value which is readily detectable by simple electronic circuits. Tests are also conducted at a temperature of 80 ºC and, despite a reduction of greater than 80% in output voltage, this is still detectable. The reliability of piezoelectric diaphragms is investigated by mechanically stressing samples over 100,000 cycles at both 20 ºC and 80 ºC and little loss of output over the test duration is found. The development of a nozzle contact sensor using a single piezoelectric diaphragm is described.
ARTICLE | doi:10.20944/preprints202210.0202.v1
Subject: Life Sciences, Biotechnology Keywords: gamma irradiation; 3D polycaprolactone; mesenchymal stem cells; cytocompatibility; biocompatibility.
Online: 14 October 2022 (03:43:22 CEST)
Additive manufacturing or 3D printing applying polycaprolactone-(PCL)-based medical devices represents an important branch of tissue engineering, where the sterilization method is a key process for further safe application in vitro and in vivo. In this study, the authors intend to access the most suitable gamma radiation conditions to sterilize PCL-based scaffolds in a preliminary biocompatibility assessment, envisioning future studies for airway obstruction conditions. Three radiation levels were considered, 25 kGy, 35 kGy and 45 kGy and evaluated as to their cyto- and biocompatibility. All three groups presented biocompatible properties, indicating an adequate sterility condition. As for the cytocompatibility analysis, devices sterilized by 35 kGy and 45 kGy showed better results, with the 45 kGy showing overall improved outcomes. This study allowed to select the most suitable sterilization condition for PCL-based scaffolds, aiming at immediate future assays, by applying 3D-customized printing techniques to specific airway obstruction lesions of the trachea.
ARTICLE | doi:10.20944/preprints202207.0454.v1
Subject: Medicine & Pharmacology, Dentistry Keywords: orthodontics; airway; clear aligners; 3D diagnostics; sleep apnea; CBCT
Online: 29 July 2022 (09:37:56 CEST)
This retrospective study evaluated changes in the pharyngeal portion of the upper airway in pa-tients with constricted and normal airway treated with clear aligners (Invisalign, Align). Additionally, the paper has assessed the change of tongue position in the oral cavity from lateral view. Evaluation was performed with specialized software (Invivo 6.0, Anatomage) on pre-treatment and posttreatment pairs of cone beam computed tomography imaging (CBCT) data. The level of airway constriction, volume, cross-section minimal area, and tongue profile were evaluated. Patients with malocclusion, with pair or initial and finishing CBCT and without sig-nificant weight change between the scans, treated with Invisalign clear aligners were distributed in two groups. Group A consisted of fifty-five patients with orthodontic malocclusion and con-stricted upper airway. Control group B consisted of thirty-one patients with orthodontic malocclusions without any airway constriction. In the group with airway constriction, there was a statistically significant increase in volume during therapy (p<0.001). The surface of the most con-stricted cross-section of airway did not change significantly after treatment in any of the groups. The airway constriction was most frequently localized at the level of 2nd cervical vertebra. The final tongue position was different from initial in 62.2% of all clear aligner treatments.
ARTICLE | doi:10.20944/preprints202205.0322.v1
Subject: Physical Sciences, Applied Physics Keywords: Theoretical analysis; bionics; jigsaw connection; 3D Printing; ﬁnite element
Online: 24 May 2022 (05:06:18 CEST)
In engineering, connections between components are often weak areas. Unreasonable connection methods can easily reduce the strength of components, resulting in unpredictable failure modes. In nature, numerous connection methods for biological structures with excellent mechanical properties have evolved. Studying the connection methods of organisms in nature can inspire new ideas for bionic connection methods. When the diabolical ironclad beetle is under pressure, the elytra are not easy to separate, which ensures the stability of the beetle's external structure, thus making the beetle extremely resistant to pressure. The reason for this is the interlocking and toughening effect of the unique jigsaw connection between the elytra. Therefore, in this paper a theoretical analysis model is established and used to analyze the mechanical behavior of the diabolical ironclad beetle's jigsaw connection during the drawing process and determine the influence of factors such as quantity, angle, and geometric characteristics on the mechanical properties of the jigsaw connection. The results of the theoretical analysis are then compared with the results of experiments and ABAQUS finite element simulation.
ARTICLE | doi:10.20944/preprints202203.0111.v1
Subject: Engineering, Civil Engineering Keywords: close range photogrammetry; 3D linear control network; object dimensioning
Online: 7 March 2022 (19:57:21 CET)
In surveying engineering tasks, close-range photogrammetry belongs to leading technology considering different aspects like the achievable accuracy, availability of hardware and software, accessibility to measured objects, or the economy. Hence, constant studies on photogrammetric data processing are desirable. Especially in industrial applications, the control points for close-range photogrammetry are usually measured using total stations. In the case of small objects, more precise positions of control points can be obtained by deploying and adjusting a three-dimensional linear network set up on the object. The article analyzes the accuracy of the proposed method, based on the measurement of the linear network using a tape with a precision of ±1 mm. The experiment shows that the adjusted positions of the network control points can be determined with high, one-millimeter accuracy. The photogrammetric 3D model derived referring to such control points and stereo-images captured with a non-metric camera is also characterized by the highest possible precision, which qualifies the presented method to accurate measurements used in surveying engineering. The authors prove that the distance between two randomly optional points derived from the 3D model of a dimensioned object is equal to the actual distance measured directly on it with one-millimeter accuracy.
ARTICLE | doi:10.20944/preprints202203.0038.v1
Subject: Engineering, Electrical & Electronic Engineering Keywords: polyimide bonding; plasma activation; hydrophilic; hybrid bonding; 3D integration
Online: 2 March 2022 (07:47:17 CET)
Polymer adhesives have emerged as a promising dielectric passivation layer in hybrid bonding for 3D integration while they raise misalignment problems during curing. In this work, the synergistic effect of oxygen plasma surface activation and wetting is utilized to achieve bonding between completed cured polyimides. The optimized process achieves a void-less bonding with a maximum shear strength of 35.3 MPa at a low temperature of 250 °C in merely 2 min, significantly shortening the bonding period and decreasing thermal stress. It is found that the plasma activation generated hydrophilic groups on the polyimide surface, and the wetting process further introduced more -OH groups and water molecular on the activated polyimide surface. The synergistic process of plasma activation and wetting facilitate bridging polyimide interfaces to achieve bonding, providing an alternative path for adhesive bonding in 3D integration.
ARTICLE | doi:10.20944/preprints202112.0460.v1
Subject: Engineering, Industrial & Manufacturing Engineering Keywords: Fault Detection; 3D Printer; Error Detection; FFF; Contact Sensor
Online: 29 December 2021 (09:10:49 CET)
Desktop fused filament fabrication (FFF) 3D printers have been growing in popularity among hobbyist and professional users as a prototyping and low-volume manufacturing tool. One issue these printers face is the inability to determine when a defect has occurred rendering the print unusable. Several techniques have been proposed to detect such defects but many of these approaches are tailored to one specific fault (e.g., filament runout/jam), use expensive hardware such as laser distance sensors, and/or use machine vision algorithms which are sensitive to ambient conditions, and hence can be unreliable. This paper proposes a versatile, reliable, and low-cost system, named MTouch, to detect millimeter-scale defects that tend to make prints unusable. At the core of MTouch is an actuated contact probe designed using a low-power solenoid, magnet, and hall effect sensor. This sensor is used to check for the presence, or absence, of the printed object at specific locations. The MTouch probe demonstrated 100% reliability, which was significantly higher than the 74% reliability achieved using a commercially available contact probe (the BLTouch). Additionally, an algorithm was developed to automatically detect common print failures such as layer shifting, bed separation, and filament runout using the MTouch probe. The algorithm was implemented on a Raspberry Pi mini-computer via an Octoprint plug-in. In head-to-head testing against a commercially available print defect detection system (The Spaghetti Detective), the MTouch was able to detect faults 44% faster on average while only increasing the print time by 8.49%. In addition, MTouch was able to detect faults The Spaghetti Detective was unable to identify such as layer shifting and filament runout/jam.
ARTICLE | doi:10.20944/preprints202110.0445.v1
Subject: Earth Sciences, Environmental Sciences Keywords: 3D geological modelling; groundwater models; incised valleys; Rome; alluvium
Online: 28 October 2021 (16:13:54 CEST)
This study presents the results of a research project financed by the Lazio Regional Government. The research focused on defining an integrated model of recent alluvial deposits in the Tiber River. To achieve this objective, geological boreholes were made to monitor the aquifer and in situ and laboratory tests carried out. The data obtained was used to detail stratigraphic aspects and improve the comprehension of water circulation beneath the recent alluvial deposits of the Tiber River in the urban area of Rome, between the Ponte Milvio bridge and the Tiber Island. The stratigraphic intervals recognised in the boreholes were parameterised based on their litho-technical characteristics. The new data acquired, and integrated with existing data in the CNR IGAG database, made it possible to produce a three-dimensional model of the lithologies in the study area.The model of the subsoil, simplified for applied reasons, was described in hy-drostratigraphic terms: three different lithotypes were subjected to piezometric levels monitor-ing. Finally, the research generated a numerical hydrological level in a stationary regime. In general, this study demonstrates how a numerical hydrogeological model calibrated by piezo-metric monitoring data can support the construction of a geological model, discarding or con-firming certain hypotheses and suggesting other means of reconstructing sedimentary bodies.
Subject: Materials Science, Biomaterials Keywords: computed tomography; 3D imaging; quantitative analysis; accurate morphometric characterization
Online: 15 October 2021 (12:12:47 CEST)
The ever-growing field of materials with applications in the biomedical field holds great promise regarding the design and fabrication of devices with specific characteristics especially scaffolds with personalized geometry and architecture. The continuous technological development pushes the limits of innovation in obtaining adequate scaffolds and establishing their characteristics and performance. To this end, computed tomography (CT) proved to be a reliable, non-destructive, high-performance machine, enabling visualization and structure analysis at sub-micronic resolutions. CT allows both qualitative and quantitative data of the 3D model, offering an overall image of its specific architectural features as well as reliable numerical data for rigorous analyses. The precise engineering of scaffolds consists in the fabrication of objects with well-defined morphometric parameters (e.g.: shape, porosity, wall thickness), and in their performance validation through thorough control over their behavior (in situ visualization, degradation, new tissue formation, wear, etc.). This review is focused on the use of CT in biomaterial science with the aim of qualitatively and quantitatively assess the scaffolds’ features and in monitoring their behavior following in vivo or in vitro experiments. Furthermore, the paper presents the benefits and limitations regarding the employment of this technique when engineering materials with applications in the biomedical field.
ARTICLE | doi:10.20944/preprints202108.0324.v1
Subject: Engineering, Electrical & Electronic Engineering Keywords: ankle-foot orthosis; position sensors; smart glove; 3D modeling
Online: 16 August 2021 (11:27:54 CEST)
A position sensing glove, called SmartScan, that creates a 3D virtual model of a real object is presented. The data from the glove is processed by a volume minimization algorithm to validate the position sensor data. This allows only data from the object’s surface to be retained. The data validation algorithm allows the user to progressively improve an image by repeatedly moving their hand over the object. In addition, the user can choose their own balance between feature resolution and invalid data rejection. The SmartScan glove is tested on a foot model and is shown to be robust against motion artifacts, and has a mean accuracy of 2.9 mm (compared to a 3D model generated from optical imaging) without calibration.
ARTICLE | doi:10.20944/preprints202108.0067.v1
Subject: Earth Sciences, Atmospheric Science Keywords: Feature extraction; independent component analysis; 3D inversion; physical properties
Online: 3 August 2021 (09:45:30 CEST)
A major problem in the post-inversion geophysical interpretation is the extraction of geological information from inverted physical property models, which do not necessarily represent all underlying geological features. No matter how accurate the inversions are, each inverted physical property model is sensitive to limited aspects of subsurface geology and is insensitive to other geological features that are otherwise detectable with complementary physical property models. Therefore, specific parts of the geological model can be reconstructed from different physical property models. To show how this reconstruction works, we simulated a complex geological system that comprises an original layered earth model that has passed several geological deformations and alteration overprints. Linear combination of complex geological features comprised three physical property distributions: Electrical resistivity, induced polarization chargeability, and magnetic susceptibility models. This study proposes a multivariate feature extraction approach to extract information about the underlying geological features comprising the bulk physical properties. We evaluated our method in numerical simulations and compared three feature extraction algorithms to see the tolerance of each method to the geological artifacts and noises. We show that the fast-independent component analysis (fast-ICA) algorithm by negentropy maximization is a robust method in the geological feature extraction that can handle the added unknown geological noises. The post-inversion physical properties are also used to reconstruct the underlying geological sources. We show that the sharpness of the inverted images is an important constraint on the feature extraction process. Our method successfully separates geological features in multiple 3D physical property models. This methodology is reproducible for any number of lithologies and physical property combinations and can recover the latent geological features, including the background geological patterns from overprints of chemical alteration.
ARTICLE | doi:10.20944/preprints202107.0597.v1
Subject: Engineering, Biomedical & Chemical Engineering Keywords: 3D printing; microfabrication; microfluidic guillotine; single cell; wound healing
Online: 27 July 2021 (09:21:04 CEST)
Micro-blade design is an important factor in the cutting of single cells and other biological structures. This paper describes the fabrication process of three dimensional (3D) micro-blades for the cutting of single cells in a microfluidic “guillotine” intended for fundamental wound repair and regeneration studies. Our microfluidic guillotine consists of a fixed 3D micro-blade centered in a microchannel to bisect cells flowing through. We show that the Nanoscribe two-photon polymerization direct laser writing system is capable of fabricating complex 3D micro-blade geometries. However, structures made of the Nanoscribe IP-S resin have low adhesion to silicon, and they tend to peel off from the substrate after at most two times of replica molding in poly(dimethylsiloxane) (PDMS). Our work demonstrates that the use of a secondary mold replicates Nanoscribe printed features faithfully for at least 10 iterations. Finally, we show that complex micro-blade features can generate different degrees of cell wounding and cell survival rates compared with simple blades possessing a vertical cutting edge fabricated with conventional 2.5D photolithography. Our work lays the foundation for future applications in single cell analyses, wound repair and regeneration studies, as well as investigations of the physics of cutting and the interaction between the micro-blade and biological structures.
ARTICLE | doi:10.20944/preprints202107.0264.v1
Subject: Physical Sciences, Applied Physics Keywords: Tuning fork gyroscope; MEMS; 3D packaging; high Q-factors
Online: 12 July 2021 (13:43:38 CEST)
Tuning fork gyroscopes (TFGs) are promising for potential high-precision applications. This work proposes and experimentally demonstrates a novel high-Q dual mass tuning fork microelectro-mechanical system (MEMS) gyroscope utilizing three-dimensional (3D) packaging techniques. Except for two symmetrically-decoupled proof masses (PM) with synchronization structures, a symmetrically-decoupled lever structure is designed to force the antiparallel, antiphase drive-mode motion and basically eliminate the low-frequency spurious modes. The thermoelastic damping (TED) and anchor loss are greatly reduced by the linearly-coupled, momentum- and torque-balanced antiphase sense mode. Besides, a novel 3D packaging technique is used to realize high Q-factors. A composite substrate encapsulation cap, fabricated by through-silicon-via (TSV) and glass-in-silicon (GIS) reflow processes, is anodically bonded to the sensing structures at wafer scales. A self-developed control circuit is adopted to realize loop control and characterize gyro-scope performances. It is shown that a high-reliability electrical connection together with a high-air-impermeability package can be fulfilled with this 3D packaging technique. Furthermore, the Q-factors of the drive and sense modes reach up to 51947 and 49249, respectively. This TFG realizes a wide measurement range of ±1800° /s and a high resolution of 0.1° /s with a scale-factor nonlinearity 720 ppm after automatic mode-matching. Besides, the long-term zero-rate output (ZRO) drift can be effectively suppressed by temperature compensation, inducing a small angle random walk (ARW) of 0.923°/√h and a low bias instability (BI) of 9.270°/h.
ARTICLE | doi:10.20944/preprints202012.0707.v1
Subject: Materials Science, Biomaterials Keywords: multiphoton lithography; crystalline; 3D nanostructures; ceramic; glass; additive manufacturing
Online: 28 December 2020 (15:44:19 CET)
The current paper is focused on the rapidly developing field of nano-/micro three-dimensional production of inorganic materials. The fabrication method includes laserlithography of hybrid organic-inorganic materials with subsequent heat treatment lead-ing to a variety of crystalline phases in 3D structures. In this work, it was examineda series of organometallic polymer precursors with different silicon (Si) and zirconium (Zr) molar ratios, ranging from 9:1 to 5:5, prepared via sol-gel method. All mixtureswere examined for perspective used in 3D laser by manufacturing by fabricating nano-and micro-feature sized structures. Their deformation and surface morphology wereevaluated depending on chemical composition and crystallographic phase. The appear-ance of a crystalline phase was proven using single-crystal X-ray diffraction analysis,which revealed a lower crystallization temperature for microstructures compared tobulk materials. Fabricated 3D objects retain a complex geometry without any distortion after heat treatment up to 1400oC. Under the proper conditions, a zircon phase (ZrSiO4 - a highly stable material) can be observed. In addition, the highest newrecord of achieved resolution below 60 nm has been reached. The proposed prepara-tion protocol can be used to manufacture micro/nano-devices with high precision andresistance to high temperature and aggressive environment.
ARTICLE | doi:10.20944/preprints202012.0073.v1
Subject: Engineering, Automotive Engineering Keywords: lubrication; wear; cooling-lubrication system; valve forging; 3D scanning
Online: 3 December 2020 (07:36:43 CET)
TThe paper presents the results of research on the influence of the settings of lubrication and cooling system parameters (solenoid valve opening time and lubricant feed pressure in terms of its quantity) in order to select the optimal lubricating conditions and thus reduce the wear of the dies used in the first forging operation of the valve forging made of high-nickel steel. Based on the observation of lubrication in the industrial process, it was found that a significant part of the lubricant fails to reach the die cavity, reaching the outside of it, which causes die wear due to seizure resulting from adhesion of the forging material to the tool surface, as well as high lubricant consumption and dirt in the press chamber. The authors proposed their own mobile lubricating and cooling system, which allows for a wide range of adjustments and provided with automatic cleaning procedures of the entire system, unlike the fixed lubrication system used so far in the industrial process. First, tests were carried out in laboratory conditions to determine the highest wettability and the lubricant remaining inside the tool cavity. These tests determined the lubrication system parameter settings which ensured that the greatest amount of lubricant remains in the cold die cavity without the forging process. Then, to verify the obtained results, tests were carried out in the industrial process of hot die forging of valve forgings, for short production runs of up to 500 forgings. The results were compared with the measurement of changes in the geometry of tools and forgings based on 3D scanning and surface topography analysis with the use of SEM. For best results (the variant of the setting of the dose and the time of exposure to lubricant), the forging process was carried out with the use of a new tool, up to the maximum service life.
ARTICLE | doi:10.20944/preprints202010.0266.v1
Subject: Engineering, Automotive Engineering Keywords: optimization; extrusion-based additive manufacturing; 3d printer; continuous fibers
Online: 13 October 2020 (09:40:25 CEST)
In this study, a novel task of printing speed optimization for continuous fiber composites is investigated. Using continuous fibers is an innovative approach to reinforce products made by fused filament fabrication (FFF) additive manufacturing (AM) technology. In the printing process of composites with continuous fibers, the printing speed is critical because of its significant effect on the geometric shape of the samples, especially their corners. During optimization in this research, continuous glass fiber (CGF) and polylactic acid (PLA) filaments were utilized as reinforcing phase and matrix, respectively, and were simultaneously fed into the extrusion-based polymer 3D printer to form PLA/CGF composites. The optimization was carried out by calculating the temperature changes of the deposited rasters in the presence and absence of fibers as a first step and then determining the special relationship between the printing speeds and rasters temperature changes. Finally, the optimal and the maximum printing speed was computed based on a hypothesis, which is proved by the results of high-quality printed composites with different geometric shapes.
ARTICLE | doi:10.20944/preprints202008.0626.v1
Subject: Engineering, Civil Engineering Keywords: multispectral lidar; single-photon lidar; building data; 3D reconstruction
Online: 28 August 2020 (08:49:07 CEST)
This paper investigated building data from multispectral and single-photon Lidar systems. The multispectral datasets from the individual channels and fused channels were explored. The multispectral and single-photon Lidar data were compared across multiple aspects: the data acquisition geometry, number of echoes, intensity, density, resolution, data defects, noise level, and the absolute and relative accuracy. In addition, we explored the performance of the multispectral and single-photon data for roof plane detection for eight complex/stylish buildings to investigate the suitability of these data for 3D building reconstruction. The building data from the single-photon and multispectral Lidar systems were evaluated with respect to the reference building vector data with an accuracy of better than 5 cm. The advantages and disadvantages of both technologies and their applications in the urban building environment are discussed.
ARTICLE | doi:10.20944/preprints202001.0123.v1
Subject: Mathematics & Computer Science, Artificial Intelligence & Robotics Keywords: static features extraction; dynamic environments; 3D reconstruction; monocular SLAM
Online: 12 January 2020 (15:12:52 CET)
Many classic visual monocular SLAM systems have been developed over the past decades, however, most of them will fail when dynamic scenarios dominate. DM-SLAM is proposed for handling dynamic objects in environments based on ORB-SLAM. The article mainly concentrates on two aspects. Firstly, DLRSAC is proposed to extract static features from the dynamic scene based on awareness of nature difference between motion and static, which is integrated into initialization of DM-SLAM. Secondly, we design candidate map points selection mechanism based on neighborhood mutual exclusion to balance the accuracy of tracking camera pose and system robustness in motion scenes. Finally, we conduct experiments in the public dataset and compare DM-SLAM with ORB-SLAM. The experiments verify the superiority of the DM-SLAM.
ARTICLE | doi:10.20944/preprints201910.0222.v1
Subject: Engineering, Other Keywords: 3D structure; gradient foam; additive manufacturing; CO2 foaming; copolymer
Online: 19 October 2019 (02:10:29 CEST)
Synthetic polymer-based gradient foams have considered as promising category of functionally graded materials with unique properties. In this study, the carbon dioxide (CO2) foaming technology has used for PET-PEN (Polyethylene Terephthalate - Polyethylene Naphthalate) copolymer towards porous functional materials with thermal insulation with reasonable mechanical strength. Through scanning electron microscope based morphological characterization, a potential to fabricate gradient foam structures with micro-pores has identified. It has shown that variation of post-foaming temperature can tune the pore size distribution although the very high post-foaming temperature tends to cause structural instability. Thermal measurement data set the limits of operation, confirmed by simultaneous differential scanning calorimeter and thermo-gravimetric analysis. Mechanical stress and thermal conductivity also has measured to find rationale of thermal insulation with reasonable mechanical strength and to elucidate the actual 3D grid foam of copolymer.
ARTICLE | doi:10.20944/preprints201907.0337.v1
Subject: Physical Sciences, Optics Keywords: ultrafast laser microfabrication; 3D glass printing; light field manipulation
Online: 29 July 2019 (11:51:49 CEST)
Three-dimensional (3D) printing has allowed for production of geometrically complex 3D objects with extreme flexibility, which is currently undergoing rapid expansions in terms of materials, functionalities, as well as areas of application. When attempting to print 3D microstructures in glass, femtosecond laser induced chemical etching (FLICE) – which is a subtractive 3D printing technique – has proved itself a powerful approach. Here, we demonstrate fabrication of macro-scale 3D glass objects of large heights up to ~3.8 cm with an identical lateral and longitudinal spatial resolution of ~20 μm. The remarkable accomplishment is achieved by revealing an unexplored regime in the interaction of ultrafast laser pulses with fused silica which results in aberration-free focusing of the laser pulses deeply inside fused silica.
ARTICLE | doi:10.20944/preprints201907.0102.v1
Subject: Life Sciences, Biochemistry Keywords: microglia exosomes; 3D culture; proteomic study; glioma; neurites outgrowth
Online: 8 July 2019 (04:26:49 CEST)
Using a combination of pan proteomic platform associated with systemic biology analyses, we demonstrate that neonatal microglial cells derived from cortex and spinal cord expressed different phenotypes upon the physiological or pathological conditions. They also highlight great variability in protein production on both cellular and exosome levels. Bioinformatics data indicate for the cortical microglia anti-inflammatory and neurogenesis/tumorigenesis characteristics, while for the spinal cord microglia involvement in the inflammatory response. We confirmed these results by performing functional testing including neurite outgrowth assays in DRGs cell line, and glioma proliferation analysis in 3D spheroid cultures. Results from these in vitro assays indicate that the microglia located at different CNS areas reveal differential biological functions. While both microglia sources enhanced growth of DRGs axons, only the spinal microglia significantly attenuated glioma proliferation. Overall these findings are pointing to the fact that the origin of neonatal microglia affects the physio-pathological function, which may address the prevalence of the glioma in the brain in comparison with the spinal cord in adult.
ARTICLE | doi:10.20944/preprints201901.0283.v1
Subject: Life Sciences, Biotechnology Keywords: breast cancer; cyclosaplin; 3D tumor model; peptide, sandalwood; silk
Online: 29 January 2019 (03:26:23 CET)
Development of novel anti-cancer peptides requires a rapid screening process which can be accelerated by using appropriate in vitro tumor models. Breast carcinoma tissue is a three dimensional (3D) microenvironment, which contains a hypoxic center surrounded by dense proliferative tissue. Biochemical clues provided by such 3D cell mass cannot be recapitulated in conventional 2D culture systems. In this experiment, we evaluate the efficacy of the sandalwood peptide, cyclosaplin on established in vitro 3D silk breast cancer model using invasive MDA-MB-231 cell line. The anti-proliferative effect of the peptide on 3D silk tumor model is monitored by alamar blue assay, with conventional 2D culture as control. The proliferation rate, glucose consumed, LDH, and MMP-9 activity of Human breast cancer cells are higher in 3D constructs compared to 2D. A higher concentration of drug is required to achieve 50% cell death in 3D culture than 2D cultures. The cyclosaplin treated MDA-MB-231 cells showed significant decrease in MMP-9 activity in 3D constructs. Microscopic analysis revealed the formation of cell clusters evenly distributed in the scaffolds. The drug treated cells were less in number, smaller and showed unusual morphology. Overall, these findings indicate the role of cyclosaplin as a promising anti-cancer therapeutics.
ARTICLE | doi:10.20944/preprints201809.0342.v1
Subject: Engineering, Biomedical & Chemical Engineering Keywords: origami; percutaneous biopsy; computed tomography; radiologic phantom; 3D printing
Online: 18 September 2018 (10:32:24 CEST)
The objective of this study is to preliminarily evaluate a new CT-biopsy guidance device, an origami needle guide. The device is created by laser cutting the structure from a sheet of cardboard, 3D printing two radiocontrast agent grids on to the surface and folding the structure into a rectangular prism with a viewing window. An abdominal imaging phantom was used to evaluate the device through CT imaging and the targeting of lesions for needle insertion. The lesion targeting trials resulted in a mean targeting error of 1.88 mm with a standard deviation of 0.73 mm. The device attaches to the patient and is rigid enough to adequately support standard biopsy needles, reducing the effect of gravity and the risk of laceration by the needles, making it potentially advantageous for biopsy of superficial lesions and lesions approached from a horizontal orientation. The device supports insertion of multiple needles at once, making it particularly suitable for composite ablation using multiple needles. Another advantage of the device is that it can guide off-axial needle insertion. The low-cost and disposability of the device make it well-suited for the minimally invasive image guided therapy environment.
ARTICLE | doi:10.20944/preprints201807.0315.v2
Subject: Materials Science, Polymers & Plastics Keywords: 3D printing; biocompatibility; hearing aids; methacrylates; zebrafish embryo model.
Online: 24 July 2018 (12:09:52 CEST)
The capacity of 3D printing (3DP) technologies to initiate speedy polymerization of solvent free resins accounts for their utility in the manufacturing of medical devices. Nonetheless, independent biological evaluation of 3D printed materials is recommended due to the unique parameters of the manufacturing process, which can influence their physical, chemical, and biological properties. In this study, E-Shell 450 material indicated for 3DP of hearing aid shells and inner ear devices was examined for biological safety using zebrafish bioassays adapted to OECD fish embryo test. In addition, the proprietary material was characterized for composition using headspace gas-chromatography mass spectrometry (GC-MS). To initiate test, newly fertilized zebrafish eggs were cultured on non-treated and ethanol-treated materials in glass petri dishes with ultrapure water, incubated at 28.5°C and assessed for developmental endpoints of toxicity at 24h interval until 96h. Data confirmed non-treated material was extremely toxic in bioassays within 24h whereas ethanol-treated material showed a relative lower toxicity possibly due to ethanoic-aqueous interactions as observed by GC-MS. With the current influx of 3D printing materials, users are urged to exercise caution. Operators must also take cognizance of the potential toxicity of the chemicals used in 3DP and implement safety measures to limit their exposure.
ARTICLE | doi:10.20944/preprints201806.0400.v1
Online: 25 June 2018 (16:48:10 CEST)
The application of solvent method in the preparation of polypropylene powders was investigated, including the influence of various technological conditions, such as the raw material melt index of polypropylene, processing temperature, dosage of the solvent and the packing pressure. The experimental data show that using solvent method can effectively produce polypropylene powder, and the optimal technological conditions are: melt index of polypropylene being about 17.8 g/10min, processing temperature being about 166.0 ℃, dosage of the solvent being about 0.067g/ml and the packing pressure being about 0.7MPa.Under this technological conditions, polypropylene powder with excellent sphericity could be prepared, the apparent density of powder can reach 0.40 g/cm3 and the prepared powder displayed a narrow size distribution with the mean size of about 42.7 µm.
ARTICLE | doi:10.20944/preprints201804.0282.v1
Subject: Chemistry, Medicinal Chemistry Keywords: aminosteroid; aminocycloartane; alkaloid; 3D-QSAR; CoMFA; antitrypanosomal activity; cytotoxicity
Online: 23 April 2018 (11:02:16 CEST)
As part of our research for new leads against human African trypanosomiasis (HAT), we report on a 3D-QSAR study for antitrypanosomal activity and cytotoxicity of aminosteroid-type alkaloids recently isolated from the African medicinal plant Holarrhena africana A. DC. (Apocynaceae), some of which are strong trypanocides against Trypanosoma brucei rhodesiense (Tbr) with low toxicity against mammalian cells. Fully optimized 3D molecular models of seventeen congeneric Holarrhena alkaloids were subjected to a comparative molecular field analysis (CoMFA). CoMFA models were obtained for both, the anti-Tbr and cytotoxic activity data. Model performance was assessed in terms of statistical characteristics (R2, Q2 and P2 for partial least squares (PLS) regression, internal cross-validation (leave-one-out) and external predictions (test set), respectively, as well as the corresponding SDEP and F-values). With R2=0.99, Q2=0.83 and P2=0.79 for anti-Tbr activity and R2=0.94, Q2=0.64, P2=0.59 for cytotoxicity against L6 rat skeletal myoblasts, both models were of good internal and external predictive power. The regression coefficients of the models representing the most prominent steric and electrostatic effects on anti-Tbr and for L6 cytotoxic activity were translated into contour maps and analyzed visually, allowing suggestions for possible modification of the aminosteroids to further increase the antitrypanosomal potency and selectivity. Very interestingly, the 3D-QSAR model established with the Holarrhena alkaloids also applied to the antitrypanosomal activity of two aminocycloartane-type compounds recently isolated by our group from Buxus sempervirens L. (Buxaceae), which indicates that these structurally similar natural products share a common SAR and, possibly, mechanism of action with the Holarrhena steroids. This 3D-QSAR study has thus resulted in plausible structural explanations of the antitrypanosomal activity and selectivity of aminosteroid- and aminocycloartane-type alkaloids as an interesting new class of trypanocides and may represent a starting point for lead optimization.
ARTICLE | doi:10.20944/preprints202111.0112.v1
Subject: Medicine & Pharmacology, Other Keywords: forensic medicine; forensic dentistry; forensic anthropology; 3D CNN; AI; deep learning; biological age determination; sex determination; 3D cephalometric; AI face estimation; growth prediction
Online: 5 November 2021 (10:00:56 CET)
Three-dimensional convolutional neural networks (3D CNN) as a type of artificial intelligence (AI) are powerful in image processing and recognition using deep learning to perform generative and descriptive tasks. The advantage of CNN compared to its predecessors is that it automatically detects the important features without any human supervision. 3D CNN are used to extract features in three dimensions where input is a 3D volume or a sequence of 2D pictures e.g., slices in a cone-beam computer tomography scan (CBCT). The main aim of this article was to bridge interdisciplinary cooperation between forensic medical experts and deep learning engineers. With emphasis activating clinical forensic experts in the field with possibly basic knowledge of advanced artificial intelligence techniques with interest in its implementation in their efforts to advance the forensic research further. This paper introduces a novel workflow of 3D CNN analysis of full-head CBCT scans. Authors explore and present 3D CNN method for forensic research design concept in five perspectives: (1) sex determination, (2) biological age estimation, (3) 3D cephalometric landmark annotation, (4) growth vectors prediction, (5) facial soft-tissue estimation from the skull and vice versa. In conclusion, 3D CNN application can be a watershed moment in forensic medicine, leading to unprecedented improvement of forensic analysis workflows based on 3D neural networks.
ARTICLE | doi:10.20944/preprints202209.0060.v1
Subject: Engineering, Electrical & Electronic Engineering Keywords: Autonomous Driving; Deep Learning; LIDAR Data; Wavelets; 3D Object Detection
Online: 5 September 2022 (13:03:00 CEST)
3D object detection is crucial for autonomous driving to understand the driving environment. Since the pooling operation causes information loss in the standard CNN, we have designed a wavelet multiresolution analysis-based 3D object detection network without a pooling operation. Additionally, instead of using a single filter like the standard convolution, we use the lower-frequency and higher-frequency coefficients as a filter. These filters capture more relevant parts than a single filter, enlarging the receptive field. The model comprises a discrete wavelet transform (DWT) and an inverse wavelet transform (IWT) with skip connections to encourage feature reuse for contrasting and expanding layers. The IWT enriches the feature representation by fully recovering the lost details during the downsampling operation. Element-wise summation is used for the skip connections to decrease the computational burden. We train the model for the Haar and Daubechies (Db4) wavelets. The two-level wavelet decomposition result shows that we can build a lightweight model without losing significant performance. The experimental results on the KITTI’s BEV and 3D evaluation benchmark show our model outperforms the Pointpillars base model by up to 14 \% while reducing the number of trainable parameters. Code will be released.
ARTICLE | doi:10.20944/preprints202205.0326.v1
Subject: Engineering, Mechanical Engineering Keywords: In-plane curvatures; Buckling; Woven structure; 3D print; Gaussian curvature
Online: 24 May 2022 (09:06:46 CEST)
Weaving is an ancient and effective structural forming technique characterized by the ability to convert two-dimensional ribbons to three-dimensional structures. However, most 3D structures woven from straight ribbons have topological defects. Baek et al. proposed a method to weave smoother continuous 3D surface structures using naturally curved (in-plane) ribbons, obtained a new surface structure with relatively continuous variation of Gaussian curvature, and analyzed its geometric properties. We believe that this new 3D surface structure with smooth geometric properties must correspond to new mechanical properties. To this end, we investigated a 3D surface structure using naturally curved (in-plane) ribbon weaving, and the results of calculations and experiments show that such structures have better buckling stability than those woven with straight ribbons. It is observed that the number of ribbons influences the buckling behavior of different types of woven structures.
ARTICLE | doi:10.20944/preprints202203.0195.v1
Subject: Engineering, Construction Keywords: circular meshes; free-form surfaces; 3D concrete printing; shell structures
Online: 15 March 2022 (06:51:19 CET)
Shell-like, double curved and thus above-average performance structures, are usually produced monolithically on site. For industrial advancement, however, they must be divided into transportable modules which can be assembled on the construction site (design for assembly). Models are lattice shells made of steel and glass, in which predominantly flat sub-surfaces (modules) are used. Therefore, the main question is: Which modularizations are suitable for flow production with mineral building materials? In this paper designed free-form surface is going to be discretized as PQ circular mesh system, suitable modules for 3D concrete printing. Moreover, the multi-criteria optimization is done with Response Surface Methodology (RSM) in order to get optimal final shape. The goal is to start from the arbitrary shape, that can be generated from two curves, with possible two-way division into modules and compare it with the resulted discretized PQ circular mesh system, realized with new algorithm. The comparison can be defined through two main criteria: geometrical and structural.
ARTICLE | doi:10.20944/preprints202202.0108.v1
Subject: Biology, Animal Sciences & Zoology Keywords: 3D printing technology; freshwater turtle; Ocadia Spp.; shell wound healing
Online: 8 February 2022 (12:22:31 CET)
Numerous cases and a shortage of resources usually limit wild animal rescue. New technology implemented might save these severely injured wild animals from the situation of euthanasia by easing the requirement of intensive medication. Three-dimensional (3D) technologies provide precise and accurate results that improve the quality of the medical application. These 3D tools have become relatively low-cost and accessible in the past years. In the medical field of exotic animal, turtle shell defect is highly challenging because of inevitable water immersion. This report is the first attempt to apply the combination of 3D scanning, computer-aid design (CAD), and 3D printing to make a protective device that frees the wound from exposure to water or infection sources. The presenting techniques successfully extricate a wild freshwater turtle from an extensive shell defect within a short period. Integration of multiple sciences to 3D technology can provide a facile model for veterinary medical applications.