Abstract: Chemical investigation of the leaves from Ageratina glabrata yielded four new thymol derivatives, namely: 10-Benzoyloxy-8,9-dehydro-6-hydroxythymol isobutyrate (4), 10-benzoyloxy-8,9-dehydro thymol (5), 10-benzoyloxythymol (6) and 10-benzoyloxy-6,8-dihydroxy-9-isobutyryloxythymol (7). In addition, (8S)-10-benzoyloxy-8,9-epoxy-6-hydroxythymol isobutyrate (1), together with other two already known thymol derivatives identified as: 10-benzoyloxy-8,9-epoxy-6-methoxythymol isobutyrate (2) and 10-benzoyloxy-8,9-epoxythymol isobutyrate (3). In this paper, we wish to publish the structures and complete assignments of 1H and 13C NMR data of compounds 1 – 7, and the absolute configuration for compound 1, unambiguously established by single crystal X-ray diffraction, and evaluation of the Flack parameter. The in vitro antiprotozoal assay showed that compound 1 and its derivative 1a were the most potent antiamoebic and antigiardial compounds. Both compounds showed selectivity and good antiamoebic activity like emetine and metronidazole, respectively, two antiprotozoal drugs used as positive controls. In relation of anti-propulsive effect, compound 1 and 1a showed moderate inhibitory activity, their activities were comparable to quercetin and compound 9, respectively, two natural antipropulsive compounds used as positive controls. These data suggest that compound 1 may play an important role in antidiarrheal properties of Ageratina glabrata.