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Chemical Diversity in Leuenbergeria bleo: From Small-Molecule Phytochemicals to Bioactive Microproteins
Junqiang Niu
,Yirong Bai
,Chunyue Du
,Antony Kam
,Shining Loo
Leuenbergeria bleo (Kunth) DC. (Cactaceae), previously classified as Pereskia bleo, represents a phylogenetically basal cactus species with a disjunct distribution across Central America, Southeast Asia, and southern China. Phytochemical investigations have traditionally emphasized small-molecule secondary metabolites, including phenolics, alkaloids, and terpenoids, which contribute to antioxidant and anti-inflammatory activities. However, recent peptidomic analyses have expanded this chemical space through the discovery of bleogens, a family of hyper-stable, cysteine-rich microproteins with specific antifungal and wound-healing properties. This review systematically integrates botanical characteristics, ethnomedicinal applications, and pharmacological profiles, providing a comparative analysis of the plant’s small-molecule constituents versus its peptidyl biologics. It identifies the co-existence of these distinct chemical classes as a defining feature of the plant’s efficacy while highlighting the need for future research into their potential interactions.
Leuenbergeria bleo (Kunth) DC. (Cactaceae), previously classified as Pereskia bleo, represents a phylogenetically basal cactus species with a disjunct distribution across Central America, Southeast Asia, and southern China. Phytochemical investigations have traditionally emphasized small-molecule secondary metabolites, including phenolics, alkaloids, and terpenoids, which contribute to antioxidant and anti-inflammatory activities. However, recent peptidomic analyses have expanded this chemical space through the discovery of bleogens, a family of hyper-stable, cysteine-rich microproteins with specific antifungal and wound-healing properties. This review systematically integrates botanical characteristics, ethnomedicinal applications, and pharmacological profiles, providing a comparative analysis of the plant’s small-molecule constituents versus its peptidyl biologics. It identifies the co-existence of these distinct chemical classes as a defining feature of the plant’s efficacy while highlighting the need for future research into their potential interactions.
Posted: 16 January 2026
Capability of ISSR, SCoT and CEAP Markers for Genetic Diversity Assessment of Lavender (Lavandula angustifolia Mill.) Genotypes
Mariya Zhelyazkova
Posted: 16 January 2026
Microfluidic Interrogation of Chitin-Induced Calcium Oscillations in the Moss Physcomitrium patens
Vanessa Kamara
,James Teague
,Kate Pagano
,Luis Vidali
,Dirk Albrecht
Plants defend against pathogens such as fungi by detecting an attack and initiating both structural and chemical responses. Pathogen perception triggers rapid cytosolic calcium influx, calcium oscillations, and induces defense gene expression, yet the mechanisms by which these or other signals encode the external stressors or propagate signals plant-wide remain unclear. Here, we present a microfluidic system to examine intracellular calcium signals of the moss Physcomitrium patens upon precise and reversible exposure to fungal chitin oligosaccharides. Epifluorescent microscopy of juvenile moss cells expressing the calcium indicator GCaMP6f revealed a rapid, coordinated calcium response to chitin addition, followed by stereotyped oscillations that subsided quickly upon chitin removal. We developed an unbiased image segmentation algorithm to automatically locate regions with cell-specific oscillatory responses, using pixel-based k-means clustering, treating each time point as a separate dimension. Calcium dynamics were distinct across adjacent cells and distinguishable by cell type. Waves were dependent on time of day, adaptation time within the device, and stimulus timing. Cytosolic calcium waves, which rose and fell symmetrically within about 60 s, appeared spontaneously at night and with short adaptation time. Chitin increased wave frequency, amplitude, and duration, and repeated chitin pulses drove regular, plant-wide oscillations at a controlled frequency. This study complements prior investigations of whole plant and growth tip dynamics and provides new methods to comprehensively study calcium signaling in plants, including mechanisms of signal propagation and the role of oscillation frequency on gene expression.
Plants defend against pathogens such as fungi by detecting an attack and initiating both structural and chemical responses. Pathogen perception triggers rapid cytosolic calcium influx, calcium oscillations, and induces defense gene expression, yet the mechanisms by which these or other signals encode the external stressors or propagate signals plant-wide remain unclear. Here, we present a microfluidic system to examine intracellular calcium signals of the moss Physcomitrium patens upon precise and reversible exposure to fungal chitin oligosaccharides. Epifluorescent microscopy of juvenile moss cells expressing the calcium indicator GCaMP6f revealed a rapid, coordinated calcium response to chitin addition, followed by stereotyped oscillations that subsided quickly upon chitin removal. We developed an unbiased image segmentation algorithm to automatically locate regions with cell-specific oscillatory responses, using pixel-based k-means clustering, treating each time point as a separate dimension. Calcium dynamics were distinct across adjacent cells and distinguishable by cell type. Waves were dependent on time of day, adaptation time within the device, and stimulus timing. Cytosolic calcium waves, which rose and fell symmetrically within about 60 s, appeared spontaneously at night and with short adaptation time. Chitin increased wave frequency, amplitude, and duration, and repeated chitin pulses drove regular, plant-wide oscillations at a controlled frequency. This study complements prior investigations of whole plant and growth tip dynamics and provides new methods to comprehensively study calcium signaling in plants, including mechanisms of signal propagation and the role of oscillation frequency on gene expression.
Posted: 16 January 2026
Photo-Oxidative Stress in Plants: Molecular Mechanisms, Damage, and Adaptive Strategies for Resilience
Photo-Oxidative Stress in Plants: Molecular Mechanisms, Damage, and Adaptive Strategies for Resilience
Xinguo Li
,Sha Yang
,Jialei Zhang
,Shubo Wan
Photo-oxidative stress results from an imbalance between light absorption and photosynthetic carbon utilization, posing a major threat to plant productivity and resilience under climate change. This review synthesizes recent advances in the molecular mechanisms of photo-oxidation, focusing on the dual role of reactive oxygen species (ROS) as both toxic byproducts and key signaling molecules. We outline the specific sites of ROS generation in chloroplasts, particularly singlet oxygen (¹O₂) at Photosystem II (PSII) and hydrogen peroxide (H₂O₂) at Photosystem I (PSI), and describe their distinct retrograde signaling pathways that regulate nuclear gene expression for acclimation. A systems perspective reveals how photo-oxidative damage propagates through interconnected cycles of impaired photosystem repair, lipid peroxidation, and protein oxidation, ultimately risking cellular collapse. To cope, plants employ a multi-layered photoprotective arsenal, including non-photochemical quenching (NPQ), alternative electron sinks, and integrated antioxidant networks. These mechanisms are further examined within an ecological and evolutionary context, highlighting natural variation and trade-offs between growth and defense. Finally, we discuss future directions for translating this knowledge into strategies for engineering climate-resilient crops, emphasizing the role of synthetic biology, multi-omics integration, and genomics-assisted breeding in supporting global food security.
Photo-oxidative stress results from an imbalance between light absorption and photosynthetic carbon utilization, posing a major threat to plant productivity and resilience under climate change. This review synthesizes recent advances in the molecular mechanisms of photo-oxidation, focusing on the dual role of reactive oxygen species (ROS) as both toxic byproducts and key signaling molecules. We outline the specific sites of ROS generation in chloroplasts, particularly singlet oxygen (¹O₂) at Photosystem II (PSII) and hydrogen peroxide (H₂O₂) at Photosystem I (PSI), and describe their distinct retrograde signaling pathways that regulate nuclear gene expression for acclimation. A systems perspective reveals how photo-oxidative damage propagates through interconnected cycles of impaired photosystem repair, lipid peroxidation, and protein oxidation, ultimately risking cellular collapse. To cope, plants employ a multi-layered photoprotective arsenal, including non-photochemical quenching (NPQ), alternative electron sinks, and integrated antioxidant networks. These mechanisms are further examined within an ecological and evolutionary context, highlighting natural variation and trade-offs between growth and defense. Finally, we discuss future directions for translating this knowledge into strategies for engineering climate-resilient crops, emphasizing the role of synthetic biology, multi-omics integration, and genomics-assisted breeding in supporting global food security.
Posted: 15 January 2026
Comparative Phenotypic and Genomic Analysis of Virulence-Associated Factors of Burkholderia glumae and B. gladioli Causing Bacterial Panicle Blight in Rice in Bangladesh
Comparative Phenotypic and Genomic Analysis of Virulence-Associated Factors of Burkholderia glumae and B. gladioli Causing Bacterial Panicle Blight in Rice in Bangladesh
Nasir Uddin
,Ismam Ahmed Protic
,Fahad Khan
,Mangal Shahi
,Plabon Saha
,Hasibul Hasan
,Urmi Akter Moon
,Muhammad Iqbal Hossain
,Rumana Afroje
,Shariful Islam
+3 authors
Bacterial panicle blight (BPB) of rice, a disease caused by Burkholderia glumae and B. gladioli, threatens global rice yields and has recently emerged in Bangladesh. We analyzed 300 BPB-infected samples from 20 Bangladesh districts using S-PG medium and gyrB PCR amplification, identifying 46 B. gladioli and 5 B. glumae isolates. Twenty of these isolates were chosen for in-depth characterization. Pathogenicity tests identified B. glumae BD_21g as the most virulent strain, followed by B. gladioli BDBgla132A. Disease severity on rice strongly correlated with onion bulb assays, validating the assay as a rapid virulence-screening tool. Phenotypic characterization of the 20 isolates revealed substantial variation in toxoflavin production, lipase activity, polygalacturonase activity, motility, and type III secretion system. Comparative genomic analysis of virulence-associated genes between BDBgla132A and BD_21g showed high protein sequence identity, particularly in toxoflavin biosynthesis and transport genes, while genes encoding lipase (lipA/lipB), polygalacturonase (pehA/pehB), and those involved in motility, displayed moderate to high identity. Both strains retained virulence-related genes that are homologous to those of B. cepacia but displayed distinct pathogenic mechanisms. Real time RT-qPCR revealed significantly higher expression of toxoflavin and lipase-encoding genes in BD_21g compared with BDBgla132A, consistent with its elevated enzymatic activities. Conversely, BD_21g showed reduced expression of pectinolytic and flagellar genes over BDBgla132A, consistent with the enhanced pectinolytic activity and motility observed in BDBgla132A. These findings reveal that B. glumae BD_21g and B. gladioli BDBgla132A employ distinct virulence strategies to infect rice, providing critical insights for developing targeted BPB management approaches in Bangladesh.
Bacterial panicle blight (BPB) of rice, a disease caused by Burkholderia glumae and B. gladioli, threatens global rice yields and has recently emerged in Bangladesh. We analyzed 300 BPB-infected samples from 20 Bangladesh districts using S-PG medium and gyrB PCR amplification, identifying 46 B. gladioli and 5 B. glumae isolates. Twenty of these isolates were chosen for in-depth characterization. Pathogenicity tests identified B. glumae BD_21g as the most virulent strain, followed by B. gladioli BDBgla132A. Disease severity on rice strongly correlated with onion bulb assays, validating the assay as a rapid virulence-screening tool. Phenotypic characterization of the 20 isolates revealed substantial variation in toxoflavin production, lipase activity, polygalacturonase activity, motility, and type III secretion system. Comparative genomic analysis of virulence-associated genes between BDBgla132A and BD_21g showed high protein sequence identity, particularly in toxoflavin biosynthesis and transport genes, while genes encoding lipase (lipA/lipB), polygalacturonase (pehA/pehB), and those involved in motility, displayed moderate to high identity. Both strains retained virulence-related genes that are homologous to those of B. cepacia but displayed distinct pathogenic mechanisms. Real time RT-qPCR revealed significantly higher expression of toxoflavin and lipase-encoding genes in BD_21g compared with BDBgla132A, consistent with its elevated enzymatic activities. Conversely, BD_21g showed reduced expression of pectinolytic and flagellar genes over BDBgla132A, consistent with the enhanced pectinolytic activity and motility observed in BDBgla132A. These findings reveal that B. glumae BD_21g and B. gladioli BDBgla132A employ distinct virulence strategies to infect rice, providing critical insights for developing targeted BPB management approaches in Bangladesh.
Posted: 15 January 2026
A Genome-Wide DNA Methylation Survey Reveals Salicylic Acid-Induced Distinct Hypomethylation Linked to Defense Responses Against Biotrophic Pathogens
Theoni Margaritopoulou
,Spyros Foutadakis
,Giannis Vatsellas
,Martina Samiotaki
,Emilia Markellou
Posted: 14 January 2026
A Review of Available eDNA Sampling Methods to Detect Plant Pathogenic Organisms in Horticultural Settings
Kes Daly
,Craig Mark Murphy
,Richard O’Hanlon
,Adam Patrick Ryan
,Michelle E. H. Thompson
,Trevor Roland Hodkinson
Posted: 14 January 2026
First Report and Pathogenicity Assessment of Diaporthe sojae Causing Root Rot on Soybean in Canada
Yong Min Kim
,Owen Wally
,Alain Ngantcha
,Nina Kepeshchuk
,Waldo Penner
,Mohamed Hafez
,Ahmed Abdelmagid
Posted: 13 January 2026
Dedifferentiation of Plant Cells
Attila Fehér
Posted: 07 January 2026
Integrated Meta-QTL and Genome-wide Association Study of Ethiopian Sesame (Sesamum indicum L.) Identifies Novel Loci for Plant Height and Seed Coat Color
Adane Gebeyehu
,Ramesh Vetukuri
,Rodomiro Ortiz
Sesame (Sesamum indicum L.) is a nutrient-rich oilseed valued for its high-quality oil and protein-rich seeds. Sesame breeding can be accelerated by unlocking the untapped genetic variation present in African landraces. This study integrated a global meta-quantitative trait loci (QTL) analysis with genome‑wide association study (GWAS) of Ethiopian germplasm to identify molecular markers for two key agronomic traits: plant height and seed coat color. To address inconsistencies among published studies, we explicitly documented the genetic maps, marker systems, mapping populations, linkage mapping and GWAS analysis methods used in each source study before conducting the meta-analysis. Only QTL whose markers could be reliably anchored to the sesame reference genome v3.0 were retained. Meta-analysis of eight published studies identified six conserved QTL hotspots on chromosomes 3, 4, 6, 8, 9, and 11. Field evaluation of 200 Ethiopian accessions over two seasons revealed wide phenotypic variation and high heritability (H² > 0.85). Using 3,633 genome-wide SNPs, GWAS detected 36 significant marker-trait associations, including multiple novel loci on chromosomes 12 and 13 not reported in Asian germplasm-focused studies. Key SNPs explained up to 14.2% (plant height) and 9.2% (seed coat color) of phenotypic variance. Candidate genes linked to significant SNPs included brassinosteroid-related CYP90B1 and ethylene-responsive AP2/ERF for plant height, and transcription factors WRKY23, DOF3.1, and SBP-like for seed coat color. Population structure showed two distinct groups (K = 2), and linkage disequilibrium decayed rapidly (~204 kb), enabling fine‑mapping. The study provides validated meta‑QTL intervals, trait-associated SNPs, and candidate genes that form a molecular foundation for marker-assisted selection in sesame improvement programs.
Sesame (Sesamum indicum L.) is a nutrient-rich oilseed valued for its high-quality oil and protein-rich seeds. Sesame breeding can be accelerated by unlocking the untapped genetic variation present in African landraces. This study integrated a global meta-quantitative trait loci (QTL) analysis with genome‑wide association study (GWAS) of Ethiopian germplasm to identify molecular markers for two key agronomic traits: plant height and seed coat color. To address inconsistencies among published studies, we explicitly documented the genetic maps, marker systems, mapping populations, linkage mapping and GWAS analysis methods used in each source study before conducting the meta-analysis. Only QTL whose markers could be reliably anchored to the sesame reference genome v3.0 were retained. Meta-analysis of eight published studies identified six conserved QTL hotspots on chromosomes 3, 4, 6, 8, 9, and 11. Field evaluation of 200 Ethiopian accessions over two seasons revealed wide phenotypic variation and high heritability (H² > 0.85). Using 3,633 genome-wide SNPs, GWAS detected 36 significant marker-trait associations, including multiple novel loci on chromosomes 12 and 13 not reported in Asian germplasm-focused studies. Key SNPs explained up to 14.2% (plant height) and 9.2% (seed coat color) of phenotypic variance. Candidate genes linked to significant SNPs included brassinosteroid-related CYP90B1 and ethylene-responsive AP2/ERF for plant height, and transcription factors WRKY23, DOF3.1, and SBP-like for seed coat color. Population structure showed two distinct groups (K = 2), and linkage disequilibrium decayed rapidly (~204 kb), enabling fine‑mapping. The study provides validated meta‑QTL intervals, trait-associated SNPs, and candidate genes that form a molecular foundation for marker-assisted selection in sesame improvement programs.
Posted: 06 January 2026
From the Balkan Peninsula to the Mesic Grassland Areas of Central Europe: Morpho-Genetic Diversity and Niche Differentiation in the Allopolyploid Complex of the Austrian Speedwell
David Jiménez-García
,Noemí López-González
,Daniel Pinto-Carrasco
,Nélida Padilla-García
,Santiago Andrés-Sánchez
,Blanca M. Rojas-Andrés
,M. Montserrat Martínez-Ortega
The Balkan Peninsula is a biodiversity hotspot where topographic and habitat heterogeneity have shaped genetic differentiation. Polyploidization significantly contributes to diversification within plant lineages, including the allopolyploid Veronica austriaca complex. We sampled 751 individuals from 50 Balkan and Central European populations belonging to the hexaploid V. austriaca and its putative diploid (V. dalmatica) and tetraploid progenitors. Diversity patterns were investigated through microsatellite markers (SSRs), plastid DNA sequences, ploidy estimations, morphological data and climatic niche differentiation analysis. Five lineages were detected within the complex according to nuclear DNA data. The plastid DNA haplotypes form two main groups that overall match those detected by SSRs data and could suggest that the hexaploid V. austriaca resulted from two different allopolyploid events. Our analyses evidence rapid and recent colonization of diverse mesic grassy habitats by an allopolyploid perennial herb across a large European scale. The enhanced dispersal abilities of the hexaploid V. austriaca (compared to its lower ploidy relatives) seem to result from higher genetic diversity and ecological niche differentiation, which may also be related to slight morphological differences of potential functional significance. Style length is a crucial character to distinguish diploids from polyploids, which may affect pollination biology within the complex.
The Balkan Peninsula is a biodiversity hotspot where topographic and habitat heterogeneity have shaped genetic differentiation. Polyploidization significantly contributes to diversification within plant lineages, including the allopolyploid Veronica austriaca complex. We sampled 751 individuals from 50 Balkan and Central European populations belonging to the hexaploid V. austriaca and its putative diploid (V. dalmatica) and tetraploid progenitors. Diversity patterns were investigated through microsatellite markers (SSRs), plastid DNA sequences, ploidy estimations, morphological data and climatic niche differentiation analysis. Five lineages were detected within the complex according to nuclear DNA data. The plastid DNA haplotypes form two main groups that overall match those detected by SSRs data and could suggest that the hexaploid V. austriaca resulted from two different allopolyploid events. Our analyses evidence rapid and recent colonization of diverse mesic grassy habitats by an allopolyploid perennial herb across a large European scale. The enhanced dispersal abilities of the hexaploid V. austriaca (compared to its lower ploidy relatives) seem to result from higher genetic diversity and ecological niche differentiation, which may also be related to slight morphological differences of potential functional significance. Style length is a crucial character to distinguish diploids from polyploids, which may affect pollination biology within the complex.
Posted: 01 January 2026
Floristic Composition and Diversity Along a Successional Gradient in Andean Montane Forests, Southwestern Colombia
Víctor Alfonso Mondragon-Valencia
,Luis Gerardo Chilito
,Carlos Edwar Cabezas-Majín
,Diego Jesús Macias Pintos
Posted: 26 December 2025
Standardization of Romanian Galeopsis tetrahit Leaf Extract in Verbascoside Using a Validated UHPLC–PDA Method
Roxana Maria Golu
,Ludovic Everard Bejenaru
,Andrei Biţă
,Cornelia Bejenaru
,Adina-Elena Segneanu
,Maria Viorica Ciocîlteu
,Antonia Blendea
,Johny Neamţu
,George Dan Mogoşanu
Galeopsis tetrahit L. (Lamiaceae) is a traditional European medicinal species rich in phenolic compounds, among which verbascoside is a key bioactive marker with strong antioxidant potential. This study reports the standardization of a G. tetrahit leaf extract in verbascoside using a fully validated UHPLC–PDA method developed according to ICH Q2(R2) requirements. Leaves of wild-grown G. tetrahit collected from southwest Romania flora were extracted with 70% ethanol, yielding 17.28% dry extract. Chromatographic identification of verbascoside was confirmed by retention time, UV–PDA spectra, and QDa mass spectrometry (m/z 623.3 [M–H]–). The method showed excellent performance, including high specificity, linearity over 1.875–60 μg/mL (r = 0.999955), low LOD and LOQ (0.2649 and 0.8028 μg/mL, respectively), and robust precision and accuracy. Dry extract contained 345.8 ± 28.3 mg verbascoside per g (34.6%, w/w), corresponding to approximately 59.8 mg/g in dried leaves. Antioxidant assays (DPPH, ABTS, FRAP), TPC and TFC confirmed notable radical scavenging and reducing activity, with pure verbascoside showing markedly stronger effects, supporting its major contribution to the extract’s antioxidant potential. These results demonstrate a reliable analytical approach and establish a verbascoside-based standardization framework for G. tetrahit extracts of documented Romanian origin.
Galeopsis tetrahit L. (Lamiaceae) is a traditional European medicinal species rich in phenolic compounds, among which verbascoside is a key bioactive marker with strong antioxidant potential. This study reports the standardization of a G. tetrahit leaf extract in verbascoside using a fully validated UHPLC–PDA method developed according to ICH Q2(R2) requirements. Leaves of wild-grown G. tetrahit collected from southwest Romania flora were extracted with 70% ethanol, yielding 17.28% dry extract. Chromatographic identification of verbascoside was confirmed by retention time, UV–PDA spectra, and QDa mass spectrometry (m/z 623.3 [M–H]–). The method showed excellent performance, including high specificity, linearity over 1.875–60 μg/mL (r = 0.999955), low LOD and LOQ (0.2649 and 0.8028 μg/mL, respectively), and robust precision and accuracy. Dry extract contained 345.8 ± 28.3 mg verbascoside per g (34.6%, w/w), corresponding to approximately 59.8 mg/g in dried leaves. Antioxidant assays (DPPH, ABTS, FRAP), TPC and TFC confirmed notable radical scavenging and reducing activity, with pure verbascoside showing markedly stronger effects, supporting its major contribution to the extract’s antioxidant potential. These results demonstrate a reliable analytical approach and establish a verbascoside-based standardization framework for G. tetrahit extracts of documented Romanian origin.
Posted: 26 December 2025
Is Plant Morphology Still Alive? Fundamental Flaws in Genetic and Transcriptomic Support for the Bipartite Interpretation of the Grass Cotyledon
Evgeny Mavrodiev
Posted: 24 December 2025
Light and Dark Conditions Reveal Distinct Components of the Phosphate Starvation Response in Soybean Roots
Anamta Shaikh
,Izabel Thurber
,Nikko R. M. Sacramento
,Jennifer Bravo
,Lynne Viall
,Reemaben Maniyar
,Maria Muhammad Ali
,Jennifer Nguyen
,Kristine Tran
,Geronimo Parra
+3 authors
Posted: 24 December 2025
Phytochemical Analysis of Bixa orellana L. Seeds by GC-MS and Evaluation of Antioxidant Activity
Luz A. Guerrero-Lagunes
,Lucero del Mar Ruiz-Posadas
,Ramón Marcos Soto-Hernández
,Jorge Cadena-Iñiguez
,Ruben San Miguel Chávez
,Juan F Aguirre-Medina
,Carlos Hugo Avendaño-Arrazate
,Eugenia Elisa Delgado-Tiburcio
,Guadalupe Elizabeth Jiménez-Gutiérrez
Posted: 23 December 2025
Induction of Embryogenic Callus, Protoplast Isolation, and PEG-Mediated Transformation Protocols in Eucommia ulmoides
Hongrun Zhou
,Zibo Zhou
,Jiangyuan Zhang
,Haoran Kan
,Mengqi Yin
,Han Zhang
,Luyao Wang
,Jie Zhao
,Jing Ye
Posted: 23 December 2025
Characterization of Genetic Diversity and Genomic Prediction of Secondary Metabolites in Pea Genetic Resources
Stefano Zanotto
,Nelson Nazzicari
,Gesine Schmidt
,Ulrike Böcker
,Francesca Vurro
,Antonella Pasqualone
,Anne Kjersti Uhlen
,Paolo Annicchiarico
This study aimed to characterize the variation and genetic architecture of traits with nutritional and health relevance in 156 pea (Pisum sativum L.) accessions representing diverse geographic origins. The traits included total phenolic compounds (TPC), two saponins (Ssβg, Ss1), sucrose, three raffinose-family oligosaccharides (RFOs) and in vitro antioxidant activity (AA). Analysis of variance revealed significant effects of regional germplasm pools for all traits. Accessions from West Asia showed the highest TPC and AA levels, while those from the East Balkans and the UK displayed the lowest values. High saponin and RFO concentrations characterized accessions from Germany and the UK. Correlation and PCA analyses highlighted strong associations within compound classes and an overall negative relationship between TPC/AA and saponins/RFOs. Hierarchical clustering separated accessions into seven metabolically distinct groups partially reflecting their geographic origin. Linkage disequilibrium decayed rapidly (average 4.7 kb). GWAS with FarmCPU and BLINK identified 37 significant SNPs, 35 within annotated genes, associated with the metabolites. The polygenic genetic architecture supported the development of genomic prediction models, which showed moderately high predictive ability (> 0.40) for all traits except raffinose content. Our findings can support line selection and the identification of genetic resources with a desired level of secondary metabolites.
This study aimed to characterize the variation and genetic architecture of traits with nutritional and health relevance in 156 pea (Pisum sativum L.) accessions representing diverse geographic origins. The traits included total phenolic compounds (TPC), two saponins (Ssβg, Ss1), sucrose, three raffinose-family oligosaccharides (RFOs) and in vitro antioxidant activity (AA). Analysis of variance revealed significant effects of regional germplasm pools for all traits. Accessions from West Asia showed the highest TPC and AA levels, while those from the East Balkans and the UK displayed the lowest values. High saponin and RFO concentrations characterized accessions from Germany and the UK. Correlation and PCA analyses highlighted strong associations within compound classes and an overall negative relationship between TPC/AA and saponins/RFOs. Hierarchical clustering separated accessions into seven metabolically distinct groups partially reflecting their geographic origin. Linkage disequilibrium decayed rapidly (average 4.7 kb). GWAS with FarmCPU and BLINK identified 37 significant SNPs, 35 within annotated genes, associated with the metabolites. The polygenic genetic architecture supported the development of genomic prediction models, which showed moderately high predictive ability (> 0.40) for all traits except raffinose content. Our findings can support line selection and the identification of genetic resources with a desired level of secondary metabolites.
Posted: 23 December 2025
Research Progress on the Insecticidal‐Antibacterial Property and Planting Application of Functional Plant Cnidium monnieri in China
Shulian Shan
,Qiantong Wei
,Chongyi Liu
,Sirui Zhao
,Feng Ge
,Hongying Cui
,Fajun Chen
Posted: 18 December 2025
Green Forest Tree Diversity and Its Contribution to Timișoara’s Landscape Architecture
Alina-Maria Țenche-Constantinescu
,Cristian Berar
,Emilian Onisan
,Ioan Sărac
,Sorina Popescu
,Ciprian George Fora
,Dorin-Dumitru Camen
,Daniel Ond Turcu
,Romuald Csaba Lorinț
,Cristian-Iliuță Găină
+5 authors
Urban forests serve as representations of nature within city landscapes. Green Forest, spanning 5,198,412 square meters, has been incorporated into the Municipality of Timișoara’s public domain and designated as a forest park. This fact increased green space per capita and enriched biodiversity within Timișoara’s landscape architecture. This study explores the diversity of Green Forest trees and highlights their contribution to urban landscapes. Statistical methods, including comparative and linear relationships analyses, were employed to assess significant variations in the dendrometric parameters of the analyzed tree species: mean tree height, mean diameter at breast height (DBH), tree age, and stand density. Principal Component Analysis (PCA) and cluster analysis were applied to uncover underlying patterns in the data. Using ArchiCAD and Lumion, high-quality 3D visual representations were developed for an ecological education area, an active recreation region, and a passive recreation area within Green Forest. Due to their morphological characteristics and phenotypic traits, the predominant tree species include Quercus robur, Quercus cerris, Quercus rubra, Fraxinus excelsior, Acer platanoides, Acer pseudoplatanus, Ulmus campestris and Robinia pseudoacacia, contribute to Timișoara’s urban aesthetic. Moreover, the results of the dendrometric analysis provide a foundation for further research in urban ecology. A key practical application of this study is landscape design renderings, which provide detailed and realistic visualizations to effectively communicate the design and functionality of Green Forest’s spaces. If implemented, these developments will encourage public engagement with nature, promoting mental and physical well-being within the community.
Urban forests serve as representations of nature within city landscapes. Green Forest, spanning 5,198,412 square meters, has been incorporated into the Municipality of Timișoara’s public domain and designated as a forest park. This fact increased green space per capita and enriched biodiversity within Timișoara’s landscape architecture. This study explores the diversity of Green Forest trees and highlights their contribution to urban landscapes. Statistical methods, including comparative and linear relationships analyses, were employed to assess significant variations in the dendrometric parameters of the analyzed tree species: mean tree height, mean diameter at breast height (DBH), tree age, and stand density. Principal Component Analysis (PCA) and cluster analysis were applied to uncover underlying patterns in the data. Using ArchiCAD and Lumion, high-quality 3D visual representations were developed for an ecological education area, an active recreation region, and a passive recreation area within Green Forest. Due to their morphological characteristics and phenotypic traits, the predominant tree species include Quercus robur, Quercus cerris, Quercus rubra, Fraxinus excelsior, Acer platanoides, Acer pseudoplatanus, Ulmus campestris and Robinia pseudoacacia, contribute to Timișoara’s urban aesthetic. Moreover, the results of the dendrometric analysis provide a foundation for further research in urban ecology. A key practical application of this study is landscape design renderings, which provide detailed and realistic visualizations to effectively communicate the design and functionality of Green Forest’s spaces. If implemented, these developments will encourage public engagement with nature, promoting mental and physical well-being within the community.
Posted: 17 December 2025
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