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Bioacoustic Detection of Wolves Using AI (BirdNET, Cry-Wolf and BioLingual)
Johanne Holm Jacobsen
,Pietro Orlando
,Line Østergaard Jensen
,Sussie Pagh
,Cino Pertoldi
Posted: 16 December 2025
Accuracy of Dosage in NegEnt Micellar Drops, CE Medical Device: A Comparison Between Pipette Droppers and Gravity Droppers
Tullio Scrimali
Posted: 15 December 2025
Phytochemical Characterization and Antimicrobial Properties of a Hydroalcoholic Extract of Trysterix corymbosus (L) Kuijt, a Chilean Mistletoe Species Hosted on Salix babilonica (L)
Alejandro A. Hidalgo
,Sergio A. Bucarey
,Beatriz Sepúlveda
,Sebastián A Cumsille-Escandar
,Alejandro Charmell
,Nicolás A. A Villagra
,Andrés Barriga
,Consuelo F Martínez-Contreras
,Jorge Escobar
,José L Martínez
+1 authors
Posted: 15 December 2025
“Native” Joint Versus “Step” Joint: There Is More Way from Data Collection to Comprehensive Conclusion
Mehdi Nematimoez
Posted: 12 December 2025
Spectral Clustering for Interdisciplinary Research: From Graph Theory to RNA-seq Data Analysis
Benjamin Couéraud
,Enikő Regényi
Spectral clustering is a powerful methodology rooted in graph theory, linear algebra, and probability theory, and is highly effective for unsupervised learning in complex, non-linear data. This article serves as a comprehensive tutorial and guide for interdisciplinary researchers, building a clear connection between the rigorous mathematical framework of spectral clustering, beginning with the continuous Laplacian operator, progressing to its discrete, graph-based counterpart, and finally culminating in a real-world application. We detail the theory through practical examples and apply the framework to bulk RNA-seq data analysis in breast cancer cell lines, demonstrating the method's unique ability to uncover both broad trends and nuanced molecular subtypes. By providing intuitive knowledge on both the theory and the application, this work aims to facilitate collaboration across mathematics, computational science, and life sciences to support robust and sound scientific research.
Spectral clustering is a powerful methodology rooted in graph theory, linear algebra, and probability theory, and is highly effective for unsupervised learning in complex, non-linear data. This article serves as a comprehensive tutorial and guide for interdisciplinary researchers, building a clear connection between the rigorous mathematical framework of spectral clustering, beginning with the continuous Laplacian operator, progressing to its discrete, graph-based counterpart, and finally culminating in a real-world application. We detail the theory through practical examples and apply the framework to bulk RNA-seq data analysis in breast cancer cell lines, demonstrating the method's unique ability to uncover both broad trends and nuanced molecular subtypes. By providing intuitive knowledge on both the theory and the application, this work aims to facilitate collaboration across mathematics, computational science, and life sciences to support robust and sound scientific research.
Posted: 11 December 2025
Phytochemical Compounds and Their Antibacterial Activity of Species of the Fabaceae Family Located in Tamaulipas, Mexico: Review
Paulina Rachel Gutiérrez-Durán
,Jorge Víctor Horta-Vega
,Fabián Eliseo Olazarán-Santibáñez
,Juan Flores-Gracia
,Hugo Brígido Barrios-García
The increasing resistance to antibiotics resulting from their indiscriminate use in humans and animals is a serious public health concern recognized by the WHO and WOAH. In this context, phytotherapy based on medicinal plants represents a promising alternative, particularly due to the presence of bioactive compounds such as flavonoids and alkaloids with antimicrobial potential. The Fabaceae family stands out for its remarkable diversity and pharmacological relevance. This review integrates available information on the 347 species recorded in the state of Tamaulipas, Mexico. Only 64 species have been subjected to phytochemical studies, and 46 are traditionally used in medicine, mainly to treat digestive disorders (32%), dermatological conditions (18%), and parasitic infections (15%). The most frequently reported metabolites are tannins and flavonoids, which support their empirical use and therapeutic potential. The main extraction techniques identified were maceration (47.7%) and Soxhlet (10.8%), employing solvents such as methanol (21.5%), water, ethanol, ethyl acetate, and hexane. Herbaceous and arboreal plants were the most investigated. Phenols and flavonoids exhibited antioxidant properties with antibacterial and antifungal activity, whereas alkaloids showed antibacterial, antifungal, anticancer, and anti-inflammatory effects. The greatest metabolic diversity was found in leaves. Microbiological studies highlight notable activity against Staphylococcus aureus, Escherichia coli, and Candida albicans, mainly evaluated through the disk diffusion method.
The increasing resistance to antibiotics resulting from their indiscriminate use in humans and animals is a serious public health concern recognized by the WHO and WOAH. In this context, phytotherapy based on medicinal plants represents a promising alternative, particularly due to the presence of bioactive compounds such as flavonoids and alkaloids with antimicrobial potential. The Fabaceae family stands out for its remarkable diversity and pharmacological relevance. This review integrates available information on the 347 species recorded in the state of Tamaulipas, Mexico. Only 64 species have been subjected to phytochemical studies, and 46 are traditionally used in medicine, mainly to treat digestive disorders (32%), dermatological conditions (18%), and parasitic infections (15%). The most frequently reported metabolites are tannins and flavonoids, which support their empirical use and therapeutic potential. The main extraction techniques identified were maceration (47.7%) and Soxhlet (10.8%), employing solvents such as methanol (21.5%), water, ethanol, ethyl acetate, and hexane. Herbaceous and arboreal plants were the most investigated. Phenols and flavonoids exhibited antioxidant properties with antibacterial and antifungal activity, whereas alkaloids showed antibacterial, antifungal, anticancer, and anti-inflammatory effects. The greatest metabolic diversity was found in leaves. Microbiological studies highlight notable activity against Staphylococcus aureus, Escherichia coli, and Candida albicans, mainly evaluated through the disk diffusion method.
Posted: 11 December 2025
Evaluating Carcinogenic and Endocrine Disrupting Potential in Women’s Hygiene and Cosmetic Formulations
Esther Antwi-Boasiako
Posted: 10 December 2025
The JARDIN Hackathon to Seek Solutions to Overcome Technical Barriers in Health Data Exchange: From the Point of Care to European Registry Networks
César Bernabé
,Daphne Wijnbergen
,Alberto Cámara
,Karolis Cremers
,Margarida Magalhães
,Daniela Vicentini Albring
,Sergi Aguiló-Castillo
,Kalia Orphanou
,Stella Tamana
,Maria Xenophontos
+9 authors
Posted: 10 December 2025
Antioxidant and Erythroprotective Effects of C-Phycocyanin from the Cyanobacterium Spirulina sp. in Attenuating Oxidative Stress Induced by Peroxyl Radicals
Cinthia Jael Gaxiola-Calvo
,Diana Fimbres-Olivarría
,Ricardo Iván González-Vega
,Yaeel Isbeth Cornejo-Ramírez
,Ariadna Thalía Bernal-Mercado
,Saul Ruiz-Cruz
,José de Jesús Ornelas-Paz
,Miguel Ángel Robles-García
,José Rogelio Ramos-Enríquez
,Carmen Lizette Del-Toro-Sánchez
Posted: 05 December 2025
A Urinary Bag Accessory for Reducing Catheter-Associated Urinary Tract Infections
Shantha Sarangapani
Posted: 05 December 2025
Comparative Characterization of High-Grade Glioma Models in Rats: Importance for Neurobiology
Vera Kudelkina
,Aleksandra Bulava
,Aleksandr Gorkin
,Yana Venerina
,Yuriy Alexandrov
Posted: 03 December 2025
Distribution and Quantification of Infectious and Parasitic Agents in Managed Honeybees in Central Italy, the Republic of Kosovo, and Albania
Franca Rossi
,Martina Iannitto
,Beqe Hulaj
,Luciano Ricchiuti
,Ani Vodica
,Patrizia Tucci
,Franco Mutinelli
,Anna Granato
Posted: 02 December 2025
Genetic Basis of Familial Cancer Risk: A Narrative Review
Eman Fares Sabik
Familial cancers are caused by inherited mutations in specific genes that regulate cell growth, division, and repair. Approximately 5–10% of all cancer cases have a hereditary component, where germline mutations in certain genes increase an individual’s susceptibility to developing cancer. Two major categories of genes are involved in cancer development: tumour suppressor genes and oncogenes. Both play critical roles in regulating normal cell behaviour, and when mutated, they can contribute to uncontrolled cell proliferation and tumour formation. In addition to genetic mutations, epigenetic alterations also play a significant role in familial cancer. Epigenetics refers to changes in gene expression due to DNA methylation, histone modifications, and the dysregulation of non-coding RNAs without alter the underlying DNA sequence. Familial cancer syndromes follow various inheritance patterns, including autosomal dominant, autosomal recessive, X-linked, and mitochondrial inheritance, each with distinct characteristics. Identifying genetic mutations associated with familial cancers is a cornerstone of genetic counselling, which helps individuals and families navigate the complex intersection of genetics, cancer risk, and prevention. Early identification of mutations enables personalized strategies for risk reduction, early detection, and, when applicable, targeted treatment options, ultimately improving patient outcomes.
Familial cancers are caused by inherited mutations in specific genes that regulate cell growth, division, and repair. Approximately 5–10% of all cancer cases have a hereditary component, where germline mutations in certain genes increase an individual’s susceptibility to developing cancer. Two major categories of genes are involved in cancer development: tumour suppressor genes and oncogenes. Both play critical roles in regulating normal cell behaviour, and when mutated, they can contribute to uncontrolled cell proliferation and tumour formation. In addition to genetic mutations, epigenetic alterations also play a significant role in familial cancer. Epigenetics refers to changes in gene expression due to DNA methylation, histone modifications, and the dysregulation of non-coding RNAs without alter the underlying DNA sequence. Familial cancer syndromes follow various inheritance patterns, including autosomal dominant, autosomal recessive, X-linked, and mitochondrial inheritance, each with distinct characteristics. Identifying genetic mutations associated with familial cancers is a cornerstone of genetic counselling, which helps individuals and families navigate the complex intersection of genetics, cancer risk, and prevention. Early identification of mutations enables personalized strategies for risk reduction, early detection, and, when applicable, targeted treatment options, ultimately improving patient outcomes.
Posted: 27 November 2025
Effects of Dichrostachys glomerata and Cissus quadrangularis Extracts on GLP-1 Secretion and DPP-4 Activity in Overweight and Obese Individuals: A Randomized Controlled Trial
Janvier Youovop
,Guy Takuissu
,Régine Minoue
,Felix Nwang
,Maryam Adegboyega
,Crista Arrey
,Inelle Makamwe
,Julius Oben
Background and Objectives: Dichrostachys glomerata and Cissus quadrangularis, two species traditionally used in Cameroon, are recognized for their weight-reducing potential. This study examined the effects of standardized extracts of these botanicals on glucagon-like peptide-1 (GLP-1), dipeptidyl peptidase-4 (DPP-4), and key metabolic outcomes in individuals with excess body weight. Materials and Methods: In this 16-week, randomized, double-blind, placebo-controlled trial, 248 adults (126 women and 122 men; mean age 41.3 ± 0.3 years; BMI 25–34.9 kg/m²) were assigned to receive 400 mg D. glomerata extract (DGE), 300 mg C. quadrangularis extract (CQE), semaglutide (dose-escalated from 3 mg to 14 mg), or placebo, administered once daily. Primary assessments included changes in GLP-1 levels and DPP-4 activity. Secondary evaluations included body composition, caloric intake, satiety response, fasting glucose levels, and lipid profiles. Results: Participants receiving DGE or CQE displayed notable elevations in circulating GLP-1 (+38.6 pg/mL and +42.2 pg/mL, respectively; p < 0.01) and significant reductions in DPP-4 activity (−15.3% and −17.8%; p < 0.01) compared with placebo. Both extracts produced substantial improvements in body weight (−5.2% and −5.8%), body fat (−10.3% and −10.9%), energy intake (−16.2% and −17.5%), and satiety (+25.6% and +27.4%) (p < 0.01). Significant changes in fasting glucose and serum lipid levels were also observed (p < 0.05). These responses are similar to those of semaglutide. Moreover, GLP-1 increments showed strong negative correlations with body fat percentage (r = −0.91 to −0.92; p < 0.001) and DPP-4 activity (r = −0.97 to −0.98; p < 0.001). Conclusion: Supplementation with D. glomerata and C. quadrangularis extracts enhanced GLP-1 secretion and reduced DPP-4 activity, yielding significant benefits for body composition and metabolic parameters. These findings indicate that both botanicals are promising natural agents for managing obesity through incretin-based mechanisms.
Background and Objectives: Dichrostachys glomerata and Cissus quadrangularis, two species traditionally used in Cameroon, are recognized for their weight-reducing potential. This study examined the effects of standardized extracts of these botanicals on glucagon-like peptide-1 (GLP-1), dipeptidyl peptidase-4 (DPP-4), and key metabolic outcomes in individuals with excess body weight. Materials and Methods: In this 16-week, randomized, double-blind, placebo-controlled trial, 248 adults (126 women and 122 men; mean age 41.3 ± 0.3 years; BMI 25–34.9 kg/m²) were assigned to receive 400 mg D. glomerata extract (DGE), 300 mg C. quadrangularis extract (CQE), semaglutide (dose-escalated from 3 mg to 14 mg), or placebo, administered once daily. Primary assessments included changes in GLP-1 levels and DPP-4 activity. Secondary evaluations included body composition, caloric intake, satiety response, fasting glucose levels, and lipid profiles. Results: Participants receiving DGE or CQE displayed notable elevations in circulating GLP-1 (+38.6 pg/mL and +42.2 pg/mL, respectively; p < 0.01) and significant reductions in DPP-4 activity (−15.3% and −17.8%; p < 0.01) compared with placebo. Both extracts produced substantial improvements in body weight (−5.2% and −5.8%), body fat (−10.3% and −10.9%), energy intake (−16.2% and −17.5%), and satiety (+25.6% and +27.4%) (p < 0.01). Significant changes in fasting glucose and serum lipid levels were also observed (p < 0.05). These responses are similar to those of semaglutide. Moreover, GLP-1 increments showed strong negative correlations with body fat percentage (r = −0.91 to −0.92; p < 0.001) and DPP-4 activity (r = −0.97 to −0.98; p < 0.001). Conclusion: Supplementation with D. glomerata and C. quadrangularis extracts enhanced GLP-1 secretion and reduced DPP-4 activity, yielding significant benefits for body composition and metabolic parameters. These findings indicate that both botanicals are promising natural agents for managing obesity through incretin-based mechanisms.
Posted: 27 November 2025
Genetic Association of VDR Variants with Diabetic Foot Ulcers in Type 2 Diabetes: Evidence from Kerala, India
Remya Reveendran
,Sreelathakumari Krishnapilla Thankam
,Anish Thekkumkara Surendran
,Sara Jones
,Suchithra Tharamel Vasu
Posted: 24 November 2025
Evaluation of Model Performance and Clinical Usefulness in Automated Rectal Segmentation in CT for Prostate and Cervical Cancer
Paria Naseri
,Daryoush Shahbazi-Gahrouei
,Saeed Rajaei-Nejad
Background: Precise delineation of the rectum is crucial in treatment planning for cancers in the pelvic region, such as prostate and cervical cancers. Manual segmentation is also still time-consuming and suffers from inter-observer variability. Since there are meaningful differences in rectal anatomy between males and females, incorporating sex-specific anatomical patterns can be used to enhance the performance of segmentations. Furthermore, recent deep learning advancements have provided promising solutions for automatically classifying patient sex from CT scans and leveraging this information for enhancing the accuracy of rectal segmentation. However, their clinical utility requires comprehensive validation against real-world standards. Methods: In this study, a two-stage deep learning pipeline was developed using CT scans from 186 patients with either prostate or cervical cancer. First, a CNN model automatically classified the patient’s biological sex from CT images in order to capture anatomical variations dependent on sex. Second, a sex-aware U-Net model performed automated rectal segmentation, allowing the network to adjust its feature representation based on the anatomical differences identified in stage one. The internal validation had an 80/20 train-test split, and 15% of the training portion was held out for validation to ensure balanced distribution regarding sex and diagnosis. Model performance was evaluated using spatial similarity metrics, including the Dice Similarity Coefficient (DSC), Hausdorff Distance, and Average Surface Distance. Additionally, a radiation oncologist conducted a retrospective clinical evaluation using a 3-point Likert scale. Statistical significance was examined using Wilcoxon signed-rank tests, Welch’s t-tests, and Mann-Whitney U test. Results: The sex-classification model attained an accuracy of 94.6% (AUC = 0.98, 95% CI: 0.96–0.99). Incorporation of predicted sex into the segmentation pipeline improved anatomical consistency of U-Net outputs. Mean DSC values were 0.91 (95% CI: 0.89–0.92) for prostate cases and 0.89 (95% CI: 0.87–0.91) for cervical cases, with no significant difference between groups (P=0.12). Surface distance metrics calculated on resampled isotropic voxels showed mean HD values of 3.4±0.8 mm and ASD of 1.2±0.3 mm, consistent with clinically acceptable accuracy. On clinical evaluation, 89.2% of contours were rated as excellent, while 9.1% required only minor adjustments. Automated segmentation reduced the average contouring time from 12.7±2.3 minutes manually to 4.3±0.9 minutes. Conclusion: The proposed sex-aware deep learning framework offers accurate, robust segmentation of the rectum in pelvic CT imaging by explicitly modeling sex-specific differences in anatomical characteristics. This physiologically informed approach enhances segmentation performance and supports reliable integration of AI-based delineation into radiotherapy workflows to improve both contouring efficiency and clinical consistency.
Background: Precise delineation of the rectum is crucial in treatment planning for cancers in the pelvic region, such as prostate and cervical cancers. Manual segmentation is also still time-consuming and suffers from inter-observer variability. Since there are meaningful differences in rectal anatomy between males and females, incorporating sex-specific anatomical patterns can be used to enhance the performance of segmentations. Furthermore, recent deep learning advancements have provided promising solutions for automatically classifying patient sex from CT scans and leveraging this information for enhancing the accuracy of rectal segmentation. However, their clinical utility requires comprehensive validation against real-world standards. Methods: In this study, a two-stage deep learning pipeline was developed using CT scans from 186 patients with either prostate or cervical cancer. First, a CNN model automatically classified the patient’s biological sex from CT images in order to capture anatomical variations dependent on sex. Second, a sex-aware U-Net model performed automated rectal segmentation, allowing the network to adjust its feature representation based on the anatomical differences identified in stage one. The internal validation had an 80/20 train-test split, and 15% of the training portion was held out for validation to ensure balanced distribution regarding sex and diagnosis. Model performance was evaluated using spatial similarity metrics, including the Dice Similarity Coefficient (DSC), Hausdorff Distance, and Average Surface Distance. Additionally, a radiation oncologist conducted a retrospective clinical evaluation using a 3-point Likert scale. Statistical significance was examined using Wilcoxon signed-rank tests, Welch’s t-tests, and Mann-Whitney U test. Results: The sex-classification model attained an accuracy of 94.6% (AUC = 0.98, 95% CI: 0.96–0.99). Incorporation of predicted sex into the segmentation pipeline improved anatomical consistency of U-Net outputs. Mean DSC values were 0.91 (95% CI: 0.89–0.92) for prostate cases and 0.89 (95% CI: 0.87–0.91) for cervical cases, with no significant difference between groups (P=0.12). Surface distance metrics calculated on resampled isotropic voxels showed mean HD values of 3.4±0.8 mm and ASD of 1.2±0.3 mm, consistent with clinically acceptable accuracy. On clinical evaluation, 89.2% of contours were rated as excellent, while 9.1% required only minor adjustments. Automated segmentation reduced the average contouring time from 12.7±2.3 minutes manually to 4.3±0.9 minutes. Conclusion: The proposed sex-aware deep learning framework offers accurate, robust segmentation of the rectum in pelvic CT imaging by explicitly modeling sex-specific differences in anatomical characteristics. This physiologically informed approach enhances segmentation performance and supports reliable integration of AI-based delineation into radiotherapy workflows to improve both contouring efficiency and clinical consistency.
Posted: 24 November 2025
Transformer-Based Classification of Transposable Element Consensus Sequences with TEclass2
Lucas Bickmann
,Matias Rodriguez
,Xiaoyi Jiang
,Wojciech Makalowski
Posted: 20 November 2025
Nisin and Chitosan Enhance the Antimicrobial Activity of Ceftiofur Against Antibiotic-Resistant Staphylococcus aureus and Have Anti-Biofilm Effect
Mónica Guadalupe Sánchez-Ceja
,Jaime Luis Esquivel-Alejo
,Ricardo Ivan Medina-Estrada
,Rafael Jiménez-Mejía
,Gustavo Santoyo
,Joel Edmundo López-Meza
,Pedro Damián Loeza-Lara
Posted: 10 November 2025
Real-Time Volumetric Alignment for Image-Guided Brain Tumor Resection: A Dynamic Computational Framework
Latha Kiran Krishna Rajendran
Posted: 03 November 2025
Transpedicular Transdural Approach for Calcified Thoracic Disc Herniations: Technical Commentary, Case Series and Review of the Literature
Spyridon Komaitis
,Elie Najjar
,Dritan Pasku
,Konstantinos Zygogiannis
,Daniel D’Aquino
,Khalid M Salem
Posted: 30 October 2025
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