Herbicides are widely used in agriculture to control weeds and enhance crop productivity. However, their application can have significant impacts on soil health and nutrient dynamics. This paper reviews the effects of herbicides on soil properties, microbial communities, and nutrient availability, with a particular focus on calcium deficiency. The review synthesizes findings from peer-reviewed journals and reports, including research conducted in Australia. The correlation between herbicide application and calcium deficiency is explored, highlighting both positive and negative impacts. The paper concludes with recommendations for sustainable herbicide use and alternative weed management strategies.

To develop aryloxyphenoxypropionate herbicides with novel structure and improved activity, a total of twenty-eight novel quinazolinone–phenoxypropionate derivatives containing a diester moiety were synthesized and tested for herbicidal activity. The bioassay results in the greenhouse showed that QPEP-I-4 exhibited excellent herbicidal activity against E. crusgalli, D. sanguinalis, S. alterniflora, E. indica, and P. alopecuroides with inhibition rates >80% at a dosage of 150 g ha-1, and displayed higher crop safety to G. hirsutum, G. max, and A. hypogaea than the commercial herbicide quizalofop-p-ethyl. Studying of the molecular mode of action by phenotypic observation, membrane permeability evaluation, and transcriptomic analysis revealed that a growth inhibition of plant by QPPE-I-4 was the result from damage of plants biomembrane. The evaluation of ACCase activity in vivo indicated that QPPE-I-4 could inhibit ACCase and may be a new type of ACCase inhibitor. The present work demonstrated that QPPE-I-4 could serve as a lead compound for further developing novel AOPP herbicides.

Weeds are a permanent component of anthropogenic ecosystems, which requires strict control to avoid the accumulation of their long–lasting seeds in the soil. With high crop infestation, many elements of crop production technologies (fertilization, productive varieties, growth stimulators, etc.) turn out to be practically meaningless due to high yield losses. Intensive use of chemical herbicides (CH) has led to undesirable consequences: contamination of soil and wastewater, accumulation of their residues in the crop, the emergence of CH-resistant populations of weeds. In this regard, the development of environmentally friendly CH with new mechanisms of action is relevant. Natural phytotoxins of plant or microbial origin may be directly explored in herbicidal formulations (biorational CH) or indirectly as scaffolds for nature-derived CH. This review considers: 1) the main current trends in the development of CH that may be important for enhancement of biorational herbicides; 2) advances in the development and practical application of natural compounds for weed control; 3) the use of phytotoxins as prototypes of synthetic herbicides. Some modern approaches such as computational methods of virtual screening and design herbicidal molecules, development of modern formulations, determination of molecular targets are stressed as important to make exploration of natural compounds more effective.

Auxins are chemical compounds of wide interest, mostly due to their role in plant metabolism and development. Since the latter half of the XX century, synthetic auxins have been used as herbicides, presenting notable advantages, such as low toxicity in humans. As of today, extensive descriptions of syntetic and natural auxins have been made; yet studies centered on the molecular recognition process of auxins are scarce. Herein, we present a comprehensive in silico characterization of auxin receptor TIR1, using structure based methods to aid de novo design of putative ligands. In addition, we conducted binding site characterization using cosolvent molecular dynamics and enhanced sampling simulations with reference ligands. We also present a database of putative auxins and decoy compounds which can aid further studies focusing on synthetic auxin design. To the best of our knowledge, this study is the first of its kind focusing on TIR1.

Herbicide resistance is an evolutionary process that affects entire agricultural regions' yield and productivity. The high number of farms and the diversity of weed management can generate hot selection spots along regions. Resistant biotypes can present a diversity of mechanisms of resistance and resistance factors depending on selective conditions inside the farm; this situation is similar to predicts by the geographic mosaic theory of coevolution. In Mexico, the agricultural region of Bajio has been affected by herbicide resistance for 25 years. To date, Avena fatua L. is one of the most abundant and problematic weed species. The objective of this study was to determine the mechanism of resistance of biotypes with failures in the weed control in 70 wheat and barley crop fields in Bajio, Mexico. The results showed that 70% of farms have biotypes with TSR, the most common mutations where Trp – 1999 – Cys, Asp – 2078 – Gly, Ile – 2041 – Asn, such mutations confer cross-resistance to ACCase-inhibiting herbicides. Metabolomic fingerprinting showed four different metabolic expression patterns. The results confirmed that in the Bajio exist multiple selection sites for both resistance mechanisms, which proves that this area can be considered as a geographic mosaic of resistance.

In regenerated oak forests, weeds are present throughout the year, the ones appearing in early spring representing a major problem. Hence, the aim of this study was to examine herbicides for early spring broadleaved weed control in the regenerated oak forests while the seedlings are in a dormant stage. During 2019 and 2020 two experiments were set up in regenerated pedunculate oak forests with 2-yar and 3-year-old seedlings and two herbicides were applied in two doses: fluroxypyr at dose 360 g a.i. ha-1 and 540 g a.i. ha-1 and clopyralid at dose 100 g a.i. ha-1 and 120 g a.i. ha-1. The results from the two-year investigations showed that fluroxypyr and clopyralid significantly reduced early spring broadleaved weeds in the regenerated pedunculate oak forests but both doses of fluroxypyr provided greater control of presented weeds than the applied doses of clopyralid. The manual weeding reduced broadleaved weeds in experiments, but that method did not have a long-term effect on the reduction of weeds. Applied doses of herbicides fluroxypyr and clopyralid did not cause phytotoxicity symptoms in dormant oak seedlings. All investigated treatments significantly reduced fresh broadleaved weed biomass compared to the control. Generally, it can be concluded that fluroxypyr and clopyralid can be successfully used for control of many early spring broadleaved weeds in the regenerated pedunculate oak forests, but oak seedlings must be in the dormant stage.

Mimosa bush (Vachellia farnesiana) is an invasive woody weed widely distributed in Australia. While it can be controlled using several mechanical and chemical techniques, this study evaluated a novel new herbicide delivery mechanism that minimizes the risk of spray drift and potential non-target damage. It was developed by Bioherbicides Australia and involves the implantation of encapsulated granular herbicides into the stem of intact plants or into the stump after cutting off plants close to ground level (cut stumped). Trials were implemented near Moree (NSW, Australia) on intact (two trials) plants and cut stumped (two trials) plants. For each trial, an untreated control plus the conventional basal bark application of a liquid formulation of triclopyr/picloram mixed with diesel was included for comparison. Encapsulated glyphosate, aminopyralid/metsulfuron-methyl, hexazinone and clopyralid were also tested in all trials. In addition, triclopyr/picloram, and metsulfuron-methyl were included in at least one of the whole plant trials. Aminopyralid/metsulfuron-methyl was consistently most effective at controlling intact plants, whilst aminopyralid/metsulfuron-methyl and clopyralid provided highest mortality when applied to cut stumps of mimosa bush. Overall, highest efficacy was achieved on single stemmed plants, but with some further refinement of the technique it should be possible to achieve similar results for multi-stemmed species.

With the long-term and large-scale use, herbicides have been well known to influence tritrophic interactions particularly natural enemies of pests in agro-ecosystems. On the other hand, herbivorous insects, especially the generalist pests, have developed antagonistic interaction to different insecticides, toxic plant secondary metabolites and even heavy metals. However, whether exposure to herbicides would affect resistance of insects against insecticides is largely unknown, especially in agricultural pests. Here, we first reported that pre-exposure to two widely used herbicides butachlor and haloxyfop-methyl for 48 h can prime resistance of a generalist agricultural pest Helicoverpa armigera Hübner against insecticide methomyl and fungal toxin aflatoxin B1. In addition, there were no significant differences between control and herbicides-treated caterpillars on weight gain, pupal weight and pupation rates, suggesting that exposure to herbicides induce resistance of H. armigera accompanied with no fitness cost. Moreover, by determining detoxifying enzyme activities and toxicity bioassay with additional inhibitor of cytochrome P450 piperonyl butoxide (PBO), we showed that exposure to herbicides might prime P450-mediated detoxification of H. armigera against insecticide. Based on these results, we propose that exposure to herbicides primes resistance of H. armigera against insecticide by eliciting a clear elevation of predominantly P450 monooxygenase activities in midgut and fat body.

In this study was investigate the effect of vegetative treatment with the herbicides Basagran 480 SL, Pulsar 40 and Express 50 WG on the fat content of seeds of different Bulgarian cotton cultivars. The experiment was carried out with twelve Bulgarian cotton cultivars - Chirpan-539, Helius, Trakia, Vicky, Philipopolis, IPK-Veno, Boyana, Avangard, Natalia, Darmy, Dorina and Nelina belonging to Gossypium hirsutum L. For the first time in the world, cotton cultivars resistant to herbicides Basagran 480 SL (bentazone), Pulsar 40 (imazamox) and Express 50 WG (Tribenuron-methyl) have been established. They are applied at the bud formation stage of cotton. Fat content in cotton seeds was determined by extraction - SR ISO 6492. For the first time in the world it has been established that in the vegetative treatment with herbicides the most valuable with regard to cottonseed fat content are all cultivars treated with Basagran 480 SL, except Chirpan-539 and Helius. It has been established for the first time that from the point of view of growing technology with vegetative treatment with the herbicide Express 50 WG, the most valuable are the cultivars Chirpan-539, Helius, Trakia, Vicky, Philipopolis, IPK-Veno, Boyana, Avangard, Natalia. None of the cultivars is highly rated when treated with the herbicide Pulsar 40 with regard to fat content in seeds.

A methodology has been developed to assess the presence and dissipation of herbicides of wide range of polarities in soil using in-tube solid phase microextraction (IT-SPME) coupled on-line to capillary liquid chromatography (capLC). The compounds investigated were tritosulfuron (TRT), triflusulfuron-methyl (TRF), aclonifen (ACL) and bifenox (BF), with log octanol-water partition coefficients (log Kow) ranging from 0.62 to 4.48. The linearity, recoveries, intra and interday precision, limits of detection (LODs) and quantification (LOQs), and accuracy of the method were established. The proposed approach was successfully applied assess the degradation of the tested herbicides in different types of soil (agricultural, urban and forest) after being exposed to different laboratory and outdoor conditions. The results obtained showed a greater persistence of the most apolar compounds ACL and BF, regardless of the soil characteristics, whereas a significant degradation of highly polar herbicides TRT and TRF was observed in soils with lowest organic matter even after a few days of exposure. Those results indicate that the proposed approach can be considered an effective tool for a better understanding of soil pollution.

This review provides a comprehensive and updated information on chalcones, presenting their sources, methods of identification and properties putting emphasis on applications in agricultural industry. Vast exploitation of synthetic pesticides led to the weed and pest resistance issue, causing economic loss but more importantly health risk due to pesticide overuse. Because one of the aim of the European Green Deal 2030 is the Farm to Fork strategy which targets on reducing by 50% the use of chemical pesticides by 2030, and push towards natural pesticides which are more environmentally friendly and restore natural resources, chalcones and their derivatives seem to fit perfectly. They have herbicidal, fungicidal, bactericidal and antiviral properties. Moreover, chalcones are naturally occurring substances, known for their favorable health effect for years, working on many areas. This review is complementary to the previous ones describing chalcones use in agriculture, updates them but additionally shows methods of detection.

(Background) Phytotoxicity refers to the capacity of chemical substances or environmental factors to have a negative impact on plants. This is a crucial issue in both the context of crop cultivation and environmental protection. (Material and Methods) The research results were based on a 3-year field experiment conducted at the experimental station in Jadwisin (52°28′ N, 21°02′ E) on loamy soil. The experiment was set up using a randomized sub-block design in a split-split-plot arrangement, with three replications. The first-order factor consisted of potato cultivars, while the second-order factors were weed control methods: 1) Control – without protection; 2) mechanical weed control, extensive mechanical treatments to close rows; 3) Sencor 70 WG – pre-emergence (PRE) of potatoes; 4) Sencor 70 WG + Titus 25 WG + Trend 90 EC – PRE of potatoes; 5) Sencor 70 WG – post-emergence (POST) of potatoes; 6) Sencor 70 WG + Titus 25 WG + Trend 90 EC – POST of potatoes; 7) Sencor 70 WG + Fusilade Forte 150 EC – POST of potatoes; 8) Sencor 70 WG + Apyros 75 WG + Atpolan 80 SC – POST of potatoes. The phytotoxic effects of herbicides on potato plants and weeds were assessed every 7 days, starting from the date when the first signs of damage appeared, until they stabilized or disappeared. (Results:) Phytotoxic damage to potato and weed plants were caused by the chemical weed control methods used. The response of potato plants to herbicides was significantly related to the genetic traits of the cultivars and meteorological conditions in the years of research. (Conclusion:) Phytotoxicity is an important aspect in both agriculture and environmental protection. Research on its mechanisms and impact will enable the development of effective plant protection strategies and the preservation of ecosystem balance.

As two commonly-used non-selective herbicides, glyphosate (GP) and diquat (DQ) are easily co-resided in lateritic paddy soil due to the rich iron/aluminum oxides, nevertheless there is limited information on their co-impact on microbial diversity and community structure in this type soil. In this study, the short-term effects of combined GP and DQ on soil microbial diversity and community structure shifts were investigated in lateritic paddy soil from a tropical agricultural region (Hainan, China) based on 16S rRNA and ITS high-throughput sequencing technology. The results showed that mixed herbicides promoted the abundance of Streptomyces in bacteria (0.45-1.84%) and Curvularia in fungi (0.01-5.85%), while GP and DQ had inhibitory effects on the abundance of Streptomyces (0.13-2.21%) and Curvularia (0.03-1.13%), which were significantly different with their single exposure (p < 0.05); the combined application of the two herbicides aggravate the adverse effect on the diversity of soil fungal community (p < 0.05), although their mixture did not have a greater impact on the soil bacteria abundance/diversity and fungi abundance (p > 0.05). Results suggested that the combined application of GP and DQ affected the fungal diversity although they did not cause other significant negative effects on soil microorganisms, hinting that more attention should be paid to the mixed effect caused by GP and DQ on specific fungal populations in lateritic paddy soil.

Phytoene is a colourless natural carotenoid that absorbs UV light and provides antioxidant and anti-inflammatory activities as well as protection against photodamage. It is therefore valued for its skin health and aesthetic benefits by the cosmetic industry, as well as by the health food sector. The halotolerant green microalga Dunaliella salina is one of the richest sources of natural carotenoids. We have previously investigated over-production of phytoene in D. salina after cultivation with the well-characterised mitosis inhibitor, chlorpropham. In this study, 15 herbicides with different modes of action were tested for their potential to promote phytoene accumulation. All herbicides showed different levels of capabilities to support phytoene over-production in D. salina. Most significantly, the two mitosis inhibitors tested in this study, propyzamide and chlorpropham, showed similar capacities to support over-production of phytoene by D. salina cultures, as phytoene desaturase inhibitors. The cellular content of phytoene increased by over 10-fold within 48 h after treatment with the mitosis inhibitors compared to untreated cultures. Results indicate a general effect of mitosis inhibitors on phytoene accumulation in D. salina. Furthermore, red light was found to significantly enhance the phytoene yield when used in combination with effective inhibitor treatments. Red light can be applied to maximize the production of phytoene from D. salina.

L-cysteine, a precursor of essential components for plant growth, is synthesized by the cysteine synthase complex, which includes O-acetylserine(thiol) lyase (OAS-TL) and serine acetyltrans-ferase. In this work, we investigated how S-benzyl-L-cysteine (SBC), an OAS-TL inhibitor, affects the growth, photosynthesis, and oxidative stress of Ipomoea grandifolia plants. SBC impaired gas exchange and chlorophyll a fluorescence, indicating damage that compromised photosynthesis and reduced plant growth. Important parameters such as light-saturated net photosynthetic rate (PNmax), light saturation point (LSP), maximum carboxylation rate of Rubisco (Vcmax), electron transport rate (J), and triose phosphate utilization (TPU) decreased as a result. The quantum yield of photosystem II photochemistry (ϕPSII) and the electron transport rate through PSII (ETR) also decreased, as did the stomatal conductance (gs) and the photochemical quenching coefficient (qP). Additionally, SBC decreased the maximum fluorescence yield (Fm), variable fluorescence (Fv), and chlorophyll index, indicating possible damage to the photosynthetic apparatus. SBC triggered oxidative stress by increasing reactive oxygen species, malondialdehyde, and conjugated dienes. We hypothesize that dysfunctions in the sulfur-containing components of the photosynthetic electron transport chain, such as the cytochrome b6f complex, ferredoxin, and iron-sulfur (Fe-S) centers are the cause of these effects, which ultimately reduce the efficiency of electron transport and hinder photosynthesis in I. grandifolia plants. In short, our findings suggest that targeting OAS-TL with inhibitors such as SBC could be a promising strategy for the development of novel herbicides.

For some persistent pollutants, such as recalcitrant pesticides, the polluted water (urban, agricultural and/or industrial) treated by conventional wastewater treatment plants is in some cases insufficient to achieve the legally required level of purity. This issue is of particular concern in areas where low rainfall does not provide sufficient water resources to meet the needs of agriculture, requiring increased reuse of water from wastewater treatment plants. In this context, Advanced Oxidation Processes (AOPs) hold great promise for the removal of organic pollutants. This study first evaluates the effectiveness of UV/S2O8= compared to heterogeneous photocatalysis using UV/TiO2 processes on the degradation of two commonly used herbicides (terbutylazine and isoproturon) in aqueous solutions using a photoreactor. In addition. the effect of UV wavelength on the degradation efficiency of both herbicides was investigated. Although degradation rate was higher under UV-254/S2O8= nm than under UV-365/S2O8= nm, complete degradation of the herbicides (0.2 mg L-1) was achieved within 30 min under UV-366 nm using a Na2S2O8 dosage of 250 mg L-1 in the absence of inorganic anions. To assess the impact of water matrix, the individual and combined effects of sulphate, bicarbonate and chloride were evaluated. They can react with hydroxyl and sulphate radicals formed during AOPs to form new radicals with a lower redox potential. The results showed negligible effects of sulphate, while the combination of bicarbonate and chloride seemed to be the key for the decrease in herbicide removal efficiency found when working with complex matrices. Finally, the main intermediates detected during the photodegradation process were identified and the likely pathways are proposed and discussed.

The shikimate pathway is crucial for the biosynthesis of aromatic amino acids in plants and represents a promising target for developing new herbicides. This work aimed to identify inhibitors of shikimate dehydrogenase (SDH), a key enzyme of the shikimate pathway that catalyzes the conversion of 3-dehydroshikimate to shikimate. Virtual screening and molecular docking were performed on the SDH active site of Arabidopsis thaliana (AtSDH), and 6-nitroquinazoline-2,4-diol (NQD) was identified as a potential inhibitor. In vitro assays showed that NQD decreased the activity of AtSDH by reducing Vmax while keeping KM unchanged, indicating noncompetitive inhibition. In vivo, hydroponic experiments revealed that NQD reduced the root length of soybean and maize. Additionally, NQD increased the total protein content and certain amino acids. Soybean roots uptake NQD more efficiently than maize roots. Furthermore, NQD reduced shikimate accumulation in glyphosate-treated soybean roots, suggesting its potential to restrict the flow of metabolites along the shikimate pathway in soybean. Simultaneous treatment of maize seedlings with glyphosate and NQD accumulated gallic acid in the roots, indicating that NQD inhibits SDH in vivo. Overall, the data indicate that NQD inhibits SDH both in vitro and in vivo, providing valuable insights into the potential development of herbicides targeting SDH.

Soybean (Glycine max L.) is a vital leguminous crop known for its rich nutritional profile, includ-ing high protein and oil content, making it a valuable resource in global agriculture and human nutrition. In Pakistan due to regulatory issues non-GMO soybean is grown therefore, the universal herbicide control method is not applicable. Similarly, for other crops, specific herbicides are avail-able but for soybean no crop specific herbicide is present. A comprehensive study was conducted over two growing seasons, in 2022 and 2023, at Agronomic Research Farm University of Agri-culture Faisalabad. The research involved 16 different treatments, including both six pre-emergence and eight post-emergence herbicides as well as a control group and weedy check. Findings of this study showed that critical importance of weed management in soybean cultiva-tion, as unchecked weed infestation can lead to substantial yield losses. Among the pre-emergence herbicide S-Metolachlor + Pendimethalin performed best and showed higher plant height (54.33 cm & 53.67 cm), 100 grain weight (11.57 g & 12 g), seed yield plant-1 (13.07 g and 12.87 g), lower Susceptibility Index (10%), higher weed control percentage (91.21% & 95.65%) higher weed con-trol efficiency (92.02% & 93.43%), herbicide efficiency index (27.54% & 32.48%) and lower weed index (18.16% & 21.70%) during 2022 and 2023 respectively. However, in post emergence herbi-cide the Fluizefop-p-butyl is most effective herbicide due to less crop injury 10% Susceptibility In-dex, higher plant height (42.67 cm & 44 cm), whole plant weight (93.33 g & 95 g), 100-grain weight (11.40 g & 11.77 g), seed yield plant-1 (12.87 g & 13.13 g), higher weed control percentage (91.12% & 91.03%) higher weed control efficiency (89.73% & 92.36%, herbicide efficiency index (21.18% & 30.41%) and lower weed index (19.42% & 20.08%) in both 2022 and 2023 respectively. Notably, herbicides such as S-Metolachlor + Atrazine + Mesotrione, Topramezone, Mesosulfu-ron-methyl + Iodosulfuron-methyl sodium and Mesotrione + Atrazine led to complete plant mor-tality, resulting lethal to soybean. The findings of this study support the hypothesis that screened the best suitable herbicides with less plant injury, and higher efficiency index. So, it is recom-mended that the application of S-Metolachlor + Pendimethalin as PRE and Fluizefop-p-butyl as POST showed the least injury and best weed control results with higher grain yield.

Saccharomyces cerevisiae are a phenotypically diverse species that adapt to a wide variety of environments by exploiting standing genetic diversity and selecting for advantageous mutations. Glyphosate and copper-based herbicides/ fungicides affect non-target organisms, these incidental exposures can impact microbial populations. In this study, glyphosate resistance was found in the historical collection of yeast which was collected over the last century, but only in yeast isolated after the introduction of glyphosate. The highest glyphosate-resistant yeasts were isolated from agricultural sites. However, herbicide application at these sites was not recorded. In an effort to assess glyphosate resistance and impact on non-target microorganisms, yeast were harvested from 15 areas with known herbicidal histories, including an organic farm, conventional farm, remediated coal mine, suburban locations, state park, and a national forest. Yeast representing 23 genera were isolated from 237 samples of plant, soil, spontaneous fermentation, nut, flower, fruit, feces, and tree material samples. Saccharomyces, Candida, Metschnikowia, Klyveromyces, Hanseniaspora, and Pichia were other genera commonly found across our sampled environments. Managed areas had less species diversity and at the brewery, only Saccharomyces and Pichia were isolated. A conventional farm growing RoundUp Ready™ corn had the lowest phylogenetic diversity and the highest glyphosate resistance. The mine was sprayed with multiple herbicides including a commercial formulation of glyphosate; however, the yeast did not have elevated glyphosate resistance. In contrast to the conventional farm, the mine was exposed to glyphosate only one year prior to sample isolation. Glyphosate resistance is an example of the anthropogenic selection of nontarget organisms.