Submitted:
16 June 2025
Posted:
17 June 2025
You are already at the latest version
Abstract
Keywords:
1. Introduction
- Glyphosate being an organophosphate, approved for use until 2033
- Propamocarb being a carbamate, approved for use until 2025
- Deltamethrin being a pyrethroid, approved for use until 2026
- Tebuconazole being a triazole, also approved for use until 2026.
2. Pesticide Use in Agriculture and Their Modes of Action
3. Transformation and Degradation of Pesticides
4. Human Exposure to Pesticides
5. The Effect of Pesticides on Gut Health
5.1. Gut Microbiota
5.2. Inflammation
5.3. Metabolic Disorders
5.4. Cancer
5.5. The Gut-Brain Axis
6. Limitations and Considerations
7. Conclusions and Perspectives
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
Abbreviations
| 3-PBA | 3-phenoxybenzoic acid |
| ADI | Acceptable daily intake |
| ALL | acute lymphoblastic leukaemia |
| ALP | Alkaline phosphatase |
| AML | acute myeloid leukaemia |
| AMPA | aminomethylphosphonic acid |
| ApoE | Apolipoprotein E |
| ASD | Autism spectrum disorders |
| b.w. | Body weight |
| BDNF | brain-derived neurotrophic factor |
| CD | Crohn’s disease |
| CD | Cluster of differentiation |
| CFU | Colony forming unit |
| Cis-DBCA | cis-(2,2-dibromovinyl)-2,2-dimethylcyclopropane-1-carboxylic acid |
| DCCAA | 2,2-dichlorovinyl)-2,2-dimethylcyclopropane-1-carboxylic acid |
| Dgat | diacylglycerol acyltransferase |
| DNMT1 | DNA methyltransferase 1 |
| DNMT3a | DNA methyltransferase 3a |
| EFSA | European Food Safety Authority |
| EHMT1 | Euchromatic histone-lysine N-methyltransferase 1 |
| EHMT2 | Euchromatic histone-lysine N-methyltransferase 2 |
| EPSPS | 5-enol-pyruvyl-shikimate-3-phosphate synthase |
| ER | Oestrogen receptor |
| ERK | Extracellular signal-regulated kinase |
| EU | European Union |
| Fas | Fatty acid synthase |
| Fatp2 | fatty acid transport protein 2 |
| FMT | Faecal microbiota transplantation |
| G.I. | Gastrointestinal |
| HDL | High density lipoprotein |
| HMPA | hexamethylphosphoramide |
| IARC | International Agency for Research on Cancer |
| IBD | Inflammatory bowel disease |
| ICAM-1 | Intercellular adhesion molecule 1 |
| IFN-γ | Interferon gamma |
| IL | Interleukin |
| LDL | Low density lipoprotein |
| LPS | lipopolysaccharide |
| MEK | Mitogen-activated protein kinase kinase |
| MIC | Minimum inhibitory concentration |
| MRL | Maximum residue level |
| NAFLD | non-alcoholic fatty liver disease |
| NOAEL | No Observed Adverse Effect Level |
| PBMC | peripheral blood mononuclear cells |
| Ppar | Peroxisome proliferator-activated receptor |
| PPP | Plant protection products |
| PRDX1 | Peroxiredoxin 1 |
| PSD-95 | postsynaptic density protein 95 |
| RNS | Reactive nitrogen species |
| ROS | Reactive oxygen species |
| SCFA | short-chain fatty acids |
| Srebp1c | Sterol regulatory element-binding protein 1c |
| SYP | synaptophysin |
| T2D | Type 2 diabetes |
| TCA | Tricarboxylic acid |
| TDM | triazole derivative metabolite |
| TET3 | Ten-Eleven Translocation Methylcytosine Dioxygenase 3 |
| TNF- α | Tumour necrosis factor alpha |
| UC | Ulcerative colitis |
| VCAM-1 | vascular cell adhesion molecule 1 |
| VEGFR2 | Vascular endothelial growth factor receptor 2 |
| 3-PBA | 3-phenoxybenzoic acid |
| ADI | Acceptable daily intake |
| ALL | acute lymphoblastic leukaemia |
| ALP | Alkaline phosphatase |
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| Pesticide | Classification based on target pest | Chemical classification | Approval for use by EFSA | Chemical structure |
| Glyphosate (N-phosphonomethyl glycine) |
Herbicide | Organophosphate | Until 2033 | ![]() |
| Deltamethrin ((S)-alpha-cyano-3-phenoxybenzyl-(1R)-cis-3-(2,2-dibromovinyl)-2,2-dimethylcyclopropane carboxylate) |
Insecticide | Class II Pyrethroid | Until 2026 | ![]() |
| Tebuconazole ([(RS)-1-p-chlorophenyl-4,4-dimethyl-3-(1H-1,2,4-triazol-1-ylmethyl) pentan-3-ol]) |
Fungicide | Triazole | Until 2026 | ![]() |
| Propamocarb (propyl -3-[dimethyl-amino] propyl carbamate) |
Fungicide | Carbamate | Until 2025 | ![]() |
| Pesticide | NOAEL (mg/kg b.w./day) | Animal | Length of exposure | Toxic effects observed at doses above NOAEL | Ref. |
| glyphosate | 59.4 | rats | 2 years | Liver and lung lesions, increased alkaline phosphatase (ALP), local effects in the G.I. tract, salivary glands and eyes. | (Álvarez et al., 2023) |
| propamocarb | 29 | rats | 1 year | Intracytoplasmic vacuolation in the choroid plexus of the brain and lacrimal gland ducts | (EFSA, 2006) |
| deltamethrin | 12 (males), 15 (females) | Charles-River CD mice | 2 years | No toxicity observed | (EFSA, 2009) |
| 16 (males), 189 (females) | Charles-River CD mice | 97 weeks | Skin ulceration, emaciation, and dyspnoea | ||
| 1 (males), 30 (females) | rats | 2 years | Uncoordinated movements reduced b.w., changes in food consumption, and haematological parameters |
| Pesticide/Formulation | Animal model | Dose | Length of exposure | Changes in gut microbiota | Ref. |
| Glyphosate | Sprague Dawley (F1 pups) | 1.75 mg/kg b.w./day | In utero, lactation and weaning up to postnatal day (PND) 31 | ↑ Prevotella (Bacteroides) ↑ Mucispirillum ↑ Blautia (Firmicutes) ↓ Lactobacillus (Firmicutes) ↓ Aggregatibacter (Pseudomonadota) ↓ Streptococcus (Firmicutes) ↓ Rothia (Actinomycetota) |
Mao et al., 2018 |
| Roundup | ↑ Prevotella (Bacteroides) ↑ Mucispirillum (Deferribacterota) ↑ Blautia (Firmicutes) ↑ Parabacterioides (Bacteroides) ↑ Veillonella (Firmicutes) ↑ Rothia (Actinomycetota) ↑ Bifidobacterium (Actinomycetota) |
Hu et al., 2021 | |||
| Glyphosate & Roundup | Sprague Dawley male F1 pups | In utero, lactation and in water for 90 days | ↓ Prevotella (Bacteroides) | Hu et al., 2021 | |
| Glyphosate | Zebrafish | 0.3 μg/L | 2 weeks | ↑ Cetobacterium (Fusobacteriota) ↓ Aeromonas (Pseudomonadota) ↓ Undibacterium (Pseudomonadota |
Bellot et al., 2024 |
| Human twin pairs | N.A. (presence of glyphosate in urine) | N.A. | No changes in overall microbiota composition | Mesnage et al., 2022 | |
| Male Sprague Dawley rats | 500 mg/kg b.w./day | 35 days | ↓ Lactobacillus (Firmicutes) ↑ Prevotella (Bacteroides) ↑ Ruminococcaea (Firmicutes) ↑ Prevotella (Bacteroides) |
Tang et al., 2020 | |
| C57BL/6J mice | 1, 10 and 100 μg/ml | 90 days | ↑ Bacteroides acidifaciens (Bacteroides) ↓ Clostridia (Firmicutes) (10 μg/ml) ↓ Lachnospiraceae (Firmicutes) (10 μg/ml) ↓ Lactobacillus (100 μg/ml) ↓Bifidobacterium pseudolongum (Actinomycetota) (10 μg/ml) ↓Enterorhabdus mucosicola (Actinomycetota) |
Lehman et al., 2023 | |
| Glyphosate & Roundup | Female Sprague Dawley rats | 0.5 – 175 mg/kg b.w./day | 90 days | ↑ Eggerthelia (Actinomycetota) ↑Acinetobacter johnsonii (Pseudomonadota) ↑ Akkermansia muciniphila (Verrucomicrobiota) ↑ Shinella (Pseudomonadota) (Roundup only) |
Mesnage et al., 2021 |
| Roundup | 0.1 – ppb – 5000 ppm | 2 years | ↑ Bacteriodetes family S24-7 ↓Lactobacillaceae (Firmicutes) |
Lozano et al., 2018 | |
| Female Balb/c mice pups | 8.75 mg | 1 week before mating of parents till weaning of pups | ↑ Blautia (Firmicutes) ↑Alistipes (Bacteroides) ↓ Akkermansia (Verrucomicrobiota |
Buchenauer et al., 2023 | |
| Deltamethrin | Female Balb/c mice | 0.2 mg/kg b.w./day | 8 weeks | ↑ Bacteroides ↓ Lactobacillus (Firmicutes) |
Ma et al., 2023 |
| Male C57BL/6 | 6 – 12 mg/kg b.w./day | 4 weeks | ↑ Firmicutes ↑/↓ Prevotella (Bacteroides) (6 and 12 mg/kg b.w./day, respectively) ↓/↑ Lachnospiraceae (Firmicutes) (6 and 12 mg/kg b.w./day, respectively) ↑ Ruminococcaceae (Firmicutes) (12 mg/kg b.w./day) ↓ Erysipecotricaaceae (Firmicutes) (12 mg/kg b.w./day) |
Li et al., 2023b | |
| Human twin pairs | N.A. | N.A. | ↑ Bacteroides ↑ Clostridium symbiosum (Firmicutes) |
Mesnage et al., 2022 | |
| Tebuconazole | Male C57BL/6 mice | 0.02 – 0.06 g/kg b.w. | 4 weeks | ↓ Prevotella (Bacteroides) ↑ Firmicutes ↑ Cyanobacteria ↑ Helicobacter |
Ku et al., 2023 |
| Male ICR mice | 3 mg/L | 12 weeks | ↑ S24-7 (Bacteroidetes) ↑Coprococcus (Firmicutes) ↑ Aukkermansia (Verrucomicrobiota) ↓ Clostridiales (Firmicutes) ↓Rominococcus (Firmicutes) ↓Oscillospira (Firmicutes) ↓Mucispirillum (Deferribacterota) ↓Rikenellaceae (Bacteroides) ↓ Dehalobacterium (Firmicutes) |
Meng et al., 2022 | |
| Tebuconazole | Male Kunming mice | 1.35 mg/kg b.w. | 12 weeks | ↑ Lactobacillus (Firmicutes) ↑ Klebsiella (Pseudomonadota) ↑ Streptococcus (Firmicutes) ↑Romboutsia (Firmicutes) ↑ Mitsuokella (Firmicutes) ↑ Enterococcus (Firmicutes) ↑ Sphingomonas (Pseudomonadata) ↓ Bacteroides |
Liu et al., 2021 |
| Propamocarb | Male zebrafish | 1000 μg/ml | 7 days | ↓ Cetobacterium (Fusobacteriota) ↓ Shewanella (Pseudomonadota) ↑ Deefgea (Pseudomonadota) ↑ Flavobacterium (Bacteroides) ↑ Acinetobacter (Pseudomonadota) ↑ Megamonas (Firmicutes) ↑ Sediminibacterium (Bacteroides) ↑ Cupriavidus (Pseudomonadota) |
Zhang et al., 2018 |
| Male C57BL/6J mice | 20 mg/L | 24 weeks | ↑ Paeniclostridium (Firmicutes) ↑ Allobaculum (Firmicutes) ↑ Clostridioides (Firmicutes) ↓ Butyricicoccus (Firmicutes) ↓ Lachrospiraceae (Firmicutes) ↓ Roseburia (Firmicutes) |
Jin et al., 2021 | |
| Male ICR mice | 50 mg/kg b.w./day | 4 weeks | ↓ Oscillospira (Firmicutes) ↓ Parabacteroides (Bacteroides) ↓ Desulfovibrio (Thermodesulfobacteriota) ↓ Ruminococcus (Firmicutes) ↑Bacteroides ↑Dehalobacterium ↑Butyricimonas |
Wu et al., 2018a |
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