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Recovery of Optical Transport Coefficients Using the Diffusion Approximation in Bilayered Tissues: A Theoretical Analysis

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22 May 2025

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Abstract
Time-domain (TD) diffuse reflectance can be quantified using photon diffusion theory (DT) to non-invasively obtain optical transport coefficients of biological media, which in turn provide markers of tissue physiology. We use an optimized, N-layer numerical DT solver in cylindrical geometry to recover optical coefficients of bi-layered media using time-resolved reflectance generated by Monte Carlo (MC) simulations. Optical coefficients for each layer of 384 bilayered tissue models were obtained from literature to model human head or limb tissue, at three near-infrared wavelengths. We fit MC data using a layered DT model to reconstruct transport coefficients of both layers simultaneously. We could retrieve bottom-layer absorption with errors less than 0.02 cm−1 while top-layer scattering was recovered to 3 cm−1 of input values. Reconstructions of the bottom-layer scattering had a mean error greater than 50%. Total hemoglobin concentration and fractional oxygen saturation were reconstructed in both layers and were within 10 μM and 5%, respectively, for the bottom layer. Recovered values of transport coefficients were significantly improved with the layered DT compared to the more widely used semi-infinite DT. Findings suggest that incorporating layered models in fitting TD reflectance could enhance its value in applications.
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1. Introduction

Time domain diffuse optical spectroscopy (TD-DOS) is a quantitative, non-invasive technique that has been widely explored across several biomedical applications [1,2,3,4,5]. The quantitative nature of this technique relies on recovering the wavelength-dependent transport coefficients –the absorption coefficient μ a ( λ ) and the reduced scattering μ s ( λ ) to optically characterize the medium from which measurements are obtained. In TD-DOS, the measured temporal attenuation and broadening of an input source (which experimentally is usually a laser having pulse durations of 10-100 ps) is mathematically modeled using theoretical or numerical methods to recover the optical coefficients μ a ( λ ) and μ s ( λ ) [6,7,8,9,10]. In human tissues, accurate recovery of μ a ( λ ) at multiple wavelengths allows for reconstructions of component chromophore concentrations such as hemoglobin, water, and/or lipids, while μ s ( λ ) is influenced by tissue microstructure [6,9,11,12,13,14]. These chromophore concentrations are used to estimate tissue vascular oxygen saturation, total blood volume, hydration, and/or cellular density in vivo [15,16,17].
Theoretical models are critical for recovering optical transport coefficients from measurements, as they provide the quantitative platforms to model light transport in turbid media. A commonly used theoretical approach to quantify TD-DOS measurements is diffusion theory (DT)[18,19,20,21,22]. DT-based approaches typically consider the tissue medium as optically-homogeneous and semi-infinite in extent across in various applications, including tracking and monitoring cerebral oxygenation and cancer development in clinical settings [3,8,19,23,24]. Though modeling biological tissues as a semi-infinite homogeneous medium allows for quantitative analysis, it is inherently insensitive to any inhomogeneities of the medium, which has been shown to lead to large errors in recovering physiological parameters [6,7,9,25,26,27].
Representing tissue as a bilayered medium would be more realistic than as a semi-infinite medium –e.g., a human head can be better modeled as having a top layer (representing scalp and skull) and a bottom layer (for the cerebral spinal fluid, gray and white matter) and limb tissues can be modeled as a layer of muscle buried under a upper-layer of fat and skin [6,28]. The use of layered models in DT would permit reconstruction of optical coefficients for each layer, independently, from the measured TD reflectance [11,17,29]. Bilayered models can thus naturally detect transport coefficients of deeper layers better, and could also be used to suppress cross-talk from superficial layers [21,30,31]. Such depth-dependent reconstructions would enhance the accuracy of cerebral and muscular hemodynamic assessments [29,30,32,33,34,35].
Analytical solutions of TD reflectance using DT in bilayered media have been reported previously [18,36,37,38,39]. However, they are not commonly used as the implementation of these solutions require computing complex analytical expressions that often include hyperbolic functions, leading to numerical instabilities because of finite machine-precision. Thus, these solvers have high computational complexity and costs [7,35,40,41,42,43]. Recently, we have developed an easy-to-use, open-source library - lightPropagation.jl - that is numerically stable and highly optimized (with a single calculation for a forward solution taking less than 0.5 ms on standard laptop computers) for computing time domain reflectance in multilayered tissue models via DT [44].
Here, we seek to establish the accuracy and precision of using lightPropagation.jl for inverse reconstruction of optical coefficients using time-domain reflectance acquired from using Monte Carlo (MC) simulated of time-resolved reflectance in bilayered tissue models. We assess the performance of the inverse model in recovering the absorption and reduced scattering coefficients. To ensure appropriate relevance to biomedical applications, we selected optical properties for tissue models simulated to match values reported in literature [28]. We use wavelength-dependent reconstructions to derive functional biological markers of fractional oxygen saturation ( SO 2 ) and hemoglobin concentrations for each tissue layer and quantify the errors associated with reconstructions to establish limits for accuracy and precision of recovered optical coefficients and functional endpoints.

2. Materials and Methods

2.1. Bi-Layered Tissue Models

Two types of tissue models, representing head and limb muscle tissue were used to generate TD reflectance using MC simulations and are depicted by Figure 1(a). Both tissue models were represented as cylinders with large radius (set to 100 cm), had upper layer thickness of 1 cm, and had semi-infinite bottom layer (thickness of 100 cm) to compute MC and DT solutions. Input values of the absorption coefficient for each layer in each tissue model was determined by solely by two chromophores - oxygenated ([HbO]) and deoxygenated hemoglobin ([dHb]) [45]. Table 1 lists values for inputs used to generate optical coefficients in each layer, for each tissue model.
Eq.(1) was used to determine μ a for each layer by specifying values for [ T H b ] and SO 2 and using molar extinction coefficients ϵ H b O ( λ ) and ϵ d H b ( λ ) from literature [28,46]. The reduced scattering coefficients ( μ s ) for the top and bottom layer were calculated using Eq.(2) using literature values for A and b, for each layer and tissue type [12,28].
μ a ( λ ) = S O 2 · ϵ H b o ( λ ) · T H b + ϵ d H b ( λ ) · ( 1 T H b )
μ s ( λ ) = A λ 500 b
64 different models were generated at three commonly used near infrared wavelengths (690, 760, and 850 nm) to span the isosbestic points of hemoglobin [6,14,20]. The full dataset consisted of 384 ( 64 × 3 × 2 ) bilayered tissue models, on which we conducted the analysis. Ranges for optical coefficients at each of the three wavelengths used, for each layer, are listed in Table A1, Table A2 and Table A3 for 690 nm, 760 nm and 850 nm, respectively.

2.2. Monte Carlo Simulation of Reflectance Signals

A previously used Monte Carlo code for photon transport was used to simulate time-resolved reflectance from each of the 384 tissue models [47,48]. MC simulations for all models were computed with 3 × 10 8 photons. For each simulation, the input source was a pencil beam (representing a delta-function) incident at the origin of the tissue model and the TD diffuse reflectance was recorded between 1cm to 3 cm in intervals of 0.25 cm with timing relative to the input delta-function source. Reflectance data was stored between 0 7 ns with temporal resolution of 0.01 ns simulations were run on a high-performance computing cluster (with each node of the cluster hosting Intel Xeon Gold processors). Each MC simulation required about 15 hours to execute and simulations were run in parallel (on separate compute nodes) to increase output efficiency. For analysis, each simulated time-resolved reflectance was smoothed (using a moving-window of span 5 or a temporal window of 0.05 ns), normalized (peak intensity = 1 ), truncated (by retaining values greater than 80 % of peak intensity of the rising edge to eliminate early arriving photons and lesser than than 10 3 % of the tail to limit statistical noise), and lastly log-transformed to obtain R M C ( ρ , t ) . Although we simulated reflectance data between 1-3 cm, we only use reflectance at three specific source detector separations (SDS) of 1.5, 2 & 2.5 cm because the noise in MC simulations at SDS of 3 cm was too high for use here.

2.3. Forward-Modeling of Diffuse Reflectance Signal

The numerical DT solver lightPropagation.jl was used to obtain the TD-reflectance (the temporal point spread function or TPSF), for any given bilayered cylindrical tissue model [27]. The SDS and was set to match those from the MC simulations, the refractive index of each layer was fixed to be 1.4 which is consistent for biological tissues from previous work [49] and the top layer thickness was set to 1 cm. To compute the reflectance signal, for each tissue model required inputs for the four transport coefficients, μ a 1 , μ a 2 , μ s 1 and μ s 2 . The computed signal was was then truncated, normalized and log-transformed following the same protocol used for processing the MC reflectance signal, to obtain R D T ( t ) .
Figure 1(b) shows representative data for TD-reflectance simulated (in symbols) and predicted from DT (solid lines) at three different wavelengths (colors) for a muscle tissue model. The values of optical absorption and scattering were calculated at each wavelength using Eq.(1) and Eq.(2) where [ T H b ] was 18 μ M for the top layer and 27 μ M and for bottom layer, with both layers having SO 2 of 50%.

2.4. Inverse Fitting of Reflectance

Inverse modeling sought to recover the four optical transport coefficients (the absorption and scattering for each layer) by fitting each time-resolved reflectance R M C ( t ) , at each SDS, for each of the 384 tissue models. Fits were obtained iteratively using a Levenberg-Marquardt non-linear optimizer (LVM) (LsqFit package in Julia version 1.9.1) to compute a set of inputs to compute R D T ( t ) that best matched the input R M C ( t ) . For DT calculations, the top layer thickness was assumed to be known (kept fixed for all analysis here at 1 cm), the refractive indices of both layers were held fixed at 1.4 and the SDS was set to match R M C ( t ) . During optimization the optical coefficients were constrained to be bounded between 0.01 < μ a < 0.5 for absorption and between 2 < μ s < 30 for scattering.
A normalized mean absolute error ( ζ ) value was computed to evaluate goodness of fits between R D T ( t ) and R M C ( t ) using equation 3
ζ = MAE | R M C ( t ) | ¯
Here, | R M C ( t ) | ¯ = 1 N i = 1 N | R M C ( t i ) | represents the average of the absolute value of the reflectance signal, and MAE = 1 N i = 1 N | R M C ( t i ) R D T ( t i ) | . N represents the total number of time bins in R M C ( t i ) and N 180 ± 100 across the entire data-set, due to data truncation of R M C ( t ) that was noted above.
For each simulated reflectance R M C ( t ) , inverse fitting was repeated until ζ 0.03 . If ζ was higher than this after 25 attempts the solution with lowest ζ was used as the fit. In Figure 1(b) inverse fits are shown by dashed lines and had ζ = 0.017 , 0.015 & 0.018 for 690 nm (indigo), 760 nm (orange) and 850 nm (red) models, respectively.
Lastly, we also used the semi-infinite DT approximation to fit R M C ( t ) using lightPropagation.jl [27]. The forward fitting used in lightPropagation.jl replicates the expression for semi-infinite DA reflectance in Ref.[37]. Inverse fitting for the semi-infinite model mirrored the bilayered approach, and used the optimizer algorithm to extract two coefficients μ a and μ s to the same goodness-of-fit threshold as used in the bi-layer reconstructions ( ζ = 0.03 ) and used the same search ranges for each optical coefficient ( 0.01 < μ a < 0.05 ; 2 < μ s < 30 ).

2.5. Retrieval of Functional Endpoints

As most real-world applications of TD-DOS involve extracting tissue physiological parameters from optical coefficients we emulated that process to the reconstructed absorption coefficients at multiple wavelengths to obtain the functional parameters of [ d H b ] and [ H b O ] using 4
μ a ( λ 1 ) μ a ( λ 2 ) μ a ( λ 3 ) = ϵ H b O ( λ 1 ) ϵ d H b ( λ 1 ) ϵ H b O ( λ 2 ) ϵ d H b ( λ 2 ) ϵ H b O ( λ 3 ) ϵ d H b ( λ 3 ) [ H b O ] [ d H b ]
Here, values of [ d H b ] and [ H b O ] were estimated using the same optimizer (as used for TD-reconstructions) to ensure only non-negative values of [ d H b ] and [ H b O ] were allowed as solutions by the optimizer. This eliminated any solutions with negative values for concentrations and thus remain physiologically meaningful. The chromophore concentrations were used to compute [ T H b ] (as [ d H b ] + [ H b O ] ) and fraction SO 2 (as [ H b O ] / [ T H b ] ) which were each then compared to input values used for each model (shown in Table 1). This process was repeated for each SDS.

3. Results

The inverse fitting protocol was employed to recover optical coefficients from each of the 384 MC models at three SDS. Reconstructions for the absorption ( μ a 1 , μ a 2 ) and reduced scattering coefficients ( μ s 1 , μ s 2 ) at 760 nm are shown in Figure 2. The mean goodness of fits at 1.5 cm and 2 cm had ζ 0.01 , across all models, with head reconstruction performing marginally better (average ζ (head) was 0.005 lesser than ζ (muscle)). However, for SDS of 2.5 cm, ζ increased to 0.02 which we hypothesize was due to an increase in statistical noise in the MC simulations at longer SDS. Each iteration for convergence took approximately 15 s on average and most R M C ( t ) fits needed 10 15 iterations to meet the required convergence threshold. In Figure 2 each marker corresponds to some fixed value for the optical coefficient being plotted, while the other three coefficients were varied. For instance, each marker in Figure 2(a) is from 16 different tissue models that shared the same μ a 1 value, while error bars are the standard error across all those 16 reconstructed values of μ a 1 as μ a 2 , μ s 1 and μ s 2 were permuted.
Figure 2(d) clearly show that the largest reconstruction errors were seen bottom layer scattering μ s 2 with reconstruction errors, generally > 5 c m 1 for all SDS. The difficulty of layered DT in reconstructing deep-layer scattering estimation observed here has been reported previously [18,50,51]. Recovery of μ a 1 was inconsistent and showed significant errors for some of the tissue models tested but the mean reconstruction error was lower than 0.03 c m 1 at SDS = 1.5 cm and 2 cm, with good agreement in many cases, as noted in Figure 2(a) by the overlapping markers. Larger errors in reconstructed values for μ a 1 were noted at SDS of 2.5 cm growing to nearly 0.1 c m 1 . Recovery of μ a 2 and μ s 1 were the highly accurate with errors < 0.01 and < 2 c m 1 , respectively, for all SDS tested. These trends preserved at the other two wavelengths (Supplementary Figure A1 for 690 nm and Figure A2 for 850 nm)
The impact of reconstruction errors on derived physiological parameters was next investigated by computing the reconstructed concentrations of ( [ d H b ] ) and ( [ H b O ] ), as illustrated in Figure 3. Reconstructed absorption coefficients at 690 nm, 760 nm, and 850 nm were used to derive the hemoglobin concentrations. Due to the sparse and non-uniform distribution of hemoglobin concentrations used in simulated tissue models, the x-axis are scaled to reflect the actual concentration values and thus the values from bar heights need to interpreted in conjunction with their x-axis locations, to assess performance of reconstructions.
Results in Figure 3(a) and Figure 3(b), demonstrate that top-layer hemoglobin retrieval was less accurate than reconstructions in the bottom layer. Most of the reconstructed values in the upper layer either overestimated (for smaller values of [ d H b ] ) or underestimated (for larger values of [ d H b ] ). For instance, the reconstructed value for [ d H b ] was 6 ± 1 μ M when its true value was 1.8 μ M for muscle (the third bar in Figure 3(a)). However, the spread (standard error) remained within 10 μ M across all models which is sufficient for clinical use [52]. The reconstructions for bottom-layer concentrations were accurate overall, with reconstructed values for both [ d H b ] and [ H b O ] being well within the computed standard error (Figure 3(c) and Figure 3(d)). This trend was true at all SDS used, but data at larger SDS were associated with a larger spread in reconstructed values.
Functionally, the most common biomarkers sought by real-world applications using TD-DOS include the total hemoglobin concentration [ T H b ] and fractional oxygen saturation SO 2 which are computed using wavelength-dependent optical transport coefficients. Figure 4 shows the true (input) values used for SO 2 and total hemoglobin concentration [ T H b ] values for the top and bottom layers vs. those derived from the inverse DT. As expected and seen in the figures, errors in hemoglobin concentrations of the top layer directly affect the accuracy of the derived physiological markers of SO 2 and [ T H b ] , leading to significant deviations from their true values.
These appear as incorrect median reconstructed values as well as higher standard error all SDS. However, both precision and accuracy of reconstructed values for the bottom layer (Figure 4(c) and Figure 4(d)) were excellent with the reconstructed median values of both SO 2 and [ T H b ] matching the expected physiological ranges to better than 3% across all SDS. One exception to this was seen for muscle models where [ T h b ] = 50 μ M and SO 2 = 50 % (for the bottom layer) that exhibited large standard error in derived values (the median value was in agreement to the true value to within 3% again) . These same tissue models shown in Figure 3 also had large standard errors in reconstructed [ d H b ] and [ H b O ] concentrations.
As a final point of analysis, we reconstructed optical coefficients from the bilayered R M C ( t ) using the semi-infinite DT expression for TD reflectance. Since the SI model reconstructed optical coefficients for a homogeneous model (hence only recovers two optical coefficients), we compared the recovered absorption coefficient to both μ a 1 and μ a 2 and repeated that for the reduced scattering as well. Figure 5, shows the median percent error (bars) along with the standard error (error bars) for all MC models (head and tissue) simulated at 15 mm SDS. It is clear that even with the difficulties in reconstruction of four optical coefficients using bi-layer DT models, the retrieved layer specific transport coefficients were always more accurate than those estimated by the semi-infinite model with a notable exception for retrieval of μ s 2 . This is also true for SDS = 2 cm but at SDS = 2.5 cm, the reconstruction of μ a 1 was significantly affected (Figure A5)

4. Discussion

We verified the accuracy of a recently reported, open-source, numerical solver of DT in cylindrical coordinates, lightpropagation.jl, to function as an inverse solver in bilayer tissue models using TD reflectance simulated at multiple SDS. 384 bilayered models were simulated using MC for a range of tissue optical properties that have been reported for head and muscle tissues. The goodness of fit was established by computing the Normalized Mean Absolute Error ( ζ ), which on average was (across all models) lower than 0.01 at SDS = 1.5 and 2 cm while ζ 0.02 at SDS of 2.5 cm. A change of 0.01 in ζ in goodness of fit significantly impacted accuracy of reconstructions of the top layer absorption μ a 1 as seen in Figure 2(a) (and Figure A1(a) Figure A2(a)). Thus ζ could potentially signal a measure of confidence in the retrieved value of optical coefficients for each fitted reflectance and could also serve as a measure of signal quality in experimental use.
A threshold of ζ 0.02 in inverse fits of the reflectance was sufficient for reconstruction of top layer scattering ( μ s 1 ) and the bottom layer absorption ( μ a 2 ) with mean errors of lesser than 5% (for μ a 2 ) and lower than 3% (for μ s 1 ), across all SDS tested and as shown in Figure 2(b)-(c) Figure A1(b)-(c) and Figure A2(b)-(c). However, the scattering of the bottom layer ( μ s 2 ) could not be reconstructed accurately and showed average error of more than 60% across all SDS, indicating layered DT is largely unperturbed by changes in deep-layer scattering, as reported before [7,18,39,50,51]. Although recovery of top layer absorption μ a 1 was achieved, it was inconsistent, with mean errors 15 % for all 384 models at SDS = 1.5 and 2 cm that increased to more than 50 % for SDS of 2.5 cm, which indicates that the reconstruction upper layer absorption was highly sensitive to SNR.
The input coefficients for each tissue model simulated here were obtained by assuming only two chromophores ( [ d H b ] and [ H b O ] ) were present in each layer, the values are shown in Table 1. In the inverse sense, these chromophore concentrations had to be obtained from reconstructed absorption coefficients, for each layer, at each wavelength. Thus, as expected, errors in recovery of μ a 1 impacted the estimation of oxygenated and deoxygenated hemoglobin concentrations for the upper layer, with mean error being higher than 5 ± 2 μ M but lower than 10 ± 3 μ M for SDS 1.5 and 2 cm (Figure 3(a)-(b) and Figure A3(a)-(b)). The upper bound on of top-layer concentration errors grew to more than 15 μ M for both chromophore concentrations at SDS of 2.5 cm (Figure A4(a)-(b)). The bottom-layer reconstructions demonstrated good agreement with ground truth values (to better than 3 μ M at all SDS) while also having low inter-model variance.
Accurate recovery of individual chromophore concentrations is important, as clinically relevant parameters such as oxygen saturation ( SO 2 ) and total hemoglobin concentration ( [ T H b ] ) are derived from the combined contributions of [ H b O ] and [ d H b ] as markers of tissue health and metabolic demand. Errors in reconstruction of the top layer chromophore concentrations thus impacted retrieval of top layer SO 2 (error > 5% for all SDS). The top layer [ T H b ] values were retrieved with mean errors greater than 15% for shorter SDS (1.5 and 2 cm), which increased to more than 70 % for larger SDS (Figure 4(a)-(b)). Again, this is consistent with the idea that the diffuse reflectance collected at larger SDS would be most insensitive to upper layer optical coefficients.
These results highlight that bilayered DT has reduced sensitivity to the top layer absorption and reconstruction of μ a 1 is sensitive to signal quality. However, recovery of bottom layer endpoints was accurate with SO 2 and [ T h B ] being estimated to better than 3% across all SDS. This result is particularly encouraging since it signifies that real-world applications could enhance the quantitative sensitivity of functional properties recovered from deeper tissue layers, while being immune to changes in superficial layers, by using improved analytical models for reconstruction of TD reflectance [11,53,54].
A practical consideration that remained significant was the computational cost involved with reconstructions using the bilayer inverse model. The inverse fits converged in under 100 milliseconds using the analytical DT expression for a SI model, while for bilayer reconstructions inverse fits were approximately three orders of magnitude slower (taking about 150 s for each model). All inverse calculations were run on nodes of a high-performance computing cluster (with each node having an Intel Xeon Gold processor). For the 384 models analyzed at 3 SDS, the total computation time was almost 40 CPU-hours. This disparity presents a significant bottleneck for real-time or high-throughput analysis and motivates the development of computationally efficient strategies or machine-learning based models for acceleration.
Ultimately, the computational costs were recovered by the layered model as it consistently outperformed the semi-infinite model in terms of accuracy to recover μ a 2 and μ s 1 even at large SDS (Figure 5 and Figure A5). On average the bilayered modeling performed about 10 - 15% better than SI model, across optical coefficients (except μ s 2 ) at SDS = 1.5 and 2 cm. It is interesting to note that bilayered DT models could extract μ a 2 accurately, even for shorter SDS could prove to be practically useful, as shorter SDS channels usually have better SNR.

5. Conclusions

We showed that using multi-layer DT for analysis of TD reflectance in bilayered media allowed for quantitative reconstruction of optical absorption of both layers with errors well within requisite thresholds for clinical utility. 64 different head and limb models at three commonly used near infrared wavelengths were used to simulate a total of 384 MC reflectance signals used for our analysis. For the top layer, absorption coefficient ( μ a 1 ) was reconstructed with mean errors < 0.03 cm 1 at SDS = 1.5 and 2 cm (rising to 0.1 cm 1 at 2.5 cm), while reduced scattering coefficient ( μ s 1 ) showed high accuracy ( < 2 cm 1 across all SDS). Bottom layer absorption, μ a 2 on the other hand was retrieved exceptionally well ( < 0.01 cm 1 error) while bottom layer scattering μ s 2 could not be well estimated. These translated to errors in biomarkers with top-layer [ T H b ] and SO 2 values having larger errors relative to the bottom-layer, highlighting the utility of layered DT to assess depth-resolved tissue physiology. Layered DT always outperformed semi-infinite DT, across all retrieved optical coefficients but had significantly higher computational costs. Future work will investigate approaches to reduce computational time for optimization, for e.g., by using SI DT to bootstrap the optimization, or to exclude μ s 2 reconstructions. Approaches that reduce dimensionality of the inverse problem could potentially accelerate reconstructions without sacrificing accuracy.

Author Contributions

Conceptualization, S.R. and K.V; methodology, S.R. and K.V; software, S.R.; validation, S.R. and K.V.; investigation, S.R.; writing—original draft preparation, S.R.; writing—review and editing, S.R. and K.V.; visualization, S.R.; supervision, K.V.; All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Institutional Review Board Statement

Not applicable.

Data Availability Statement

LightPropagation.jl is a registered Julia package that can be installed on a Julia version > 1.5. The MC simulations and inverse fitting codes are available on request.

Acknowledgments

This work builds upon the computational advancements of Dr. Michael Helton (University of Michigan), developer of LightPropagation.jl – a Julia-based toolbox for solving time-resolved photon migration in turbid media . We also thank Dr. Jens Müller for facilitating high-performance simulations on the Miami Redhawk cluster.

Conflicts of Interest

The authors declare no conflicts of interest.

Abbreviations

The following abbreviations are used in this manuscript:
SI Semi Infinite
DT Diffusion Theory
MC Monte Carlo
TPSF Temporal Point Spread Function
THb Total Hemoglobin Concentration
SO 2 Fractional Oxygen Saturation
SDS Source Detector Separation
SNR Signal to Noise Ratio

Appendix A. Computed Optical Transport Coefficients

Here we report the computed optical coefficients using the ranges for SO 2 and [ T H b ] described in Table 1.
Table A1. The selected target tissue properties. The values below were calculated for λ = 690 nm. The value reported for each optical property is the mean of the coefficients (4 for absorption for each layer and 2 for scattering for ech layer) along with the range covering all the computed values. The coefficient values used for our analysis for each model, however were not evenly spread within this range.
Table A1. The selected target tissue properties. The values below were calculated for λ = 690 nm. The value reported for each optical property is the mean of the coefficients (4 for absorption for each layer and 2 for scattering for ech layer) along with the range covering all the computed values. The coefficient values used for our analysis for each model, however were not evenly spread within this range.
Tissue Model Layer μ a c m 1 μ s p c m 1
Head Top (scalp,skull) 0.079 ± 0.091 13.329 ± 4.251
Bottom (Brain) 0.106 ± 0.055 14.810 ± 0.271
Muscle Top (skin,fat) 0.074 ± 0.090 18.854 ± 6.752
Bottom (Muscle) 0.088 ± 0.046 6.822 ± 2.844
Table A2. The values below were calculated for λ = 760 nm.
Table A2. The values below were calculated for λ = 760 nm.
Tissue Model Layer μ a c m 1 μ s p c m 1
Head Top (scalp,skull) 0.096 ± 0.072 12.823 ± 3.868
Bottom (Brain) 0.107 ± 0.046 12.068 ± 0.88
Muscle Top (skin,fat) 0.080 ± 0.070 17.467 ± 5.807
Bottom (Muscle) 0.087 ± 0.036 5.939 ± 2.905
Table A3. The values below were calculated for λ = 850 nm.
Table A3. The values below were calculated for λ = 850 nm.
Tissue Model Layer μ a c m 1 μ s p c m 1
Head Top (scalp,skull) 0.120 ± 0.062 12.267 ± 3.451
Bottom (Brain) 0.104 ± 0.038 9.619 ± 1.702
Muscle Top (skin,fat) 0.086 ± 0.057 16.003 ± 4.835
Bottom (Muscle) 0.081 ± 0.028 5.098 ± 2.880

Appendix B. Reconstruction of Optical Coefficients

The optical coefficients recovered across all source-detector separations exhibited consistent recovery accuracy trends across all wavelengths as described above. Figure A1 and Figure A2 illustrate the reconstruction of the optical coefficients at wavelengths of 690 nm and 850 nm, respectively.
Figure A1. True versus reconstructed transport coefficients at 690 nm.
Figure A1. True versus reconstructed transport coefficients at 690 nm.
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Figure A2. True versus reconstructed transport coefficients at 850 nm.
Figure A2. True versus reconstructed transport coefficients at 850 nm.
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Appendix C. Reconstruction of Deoxygenated and Oxygenated Hemoglobin Concentrations

Figure A3. The reconstructed chromophore concentrations at 2 cm. Here, similar to Figure 3, the x-axis is not evenly spaced to avoid sparsely populated graph.
Figure A3. The reconstructed chromophore concentrations at 2 cm. Here, similar to Figure 3, the x-axis is not evenly spaced to avoid sparsely populated graph.
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Figure A4. The reconstructed chromophore concentration at 2.5 cm. The notable difference here being the increased error in retrieval of the top layer concentrations.
Figure A4. The reconstructed chromophore concentration at 2.5 cm. The notable difference here being the increased error in retrieval of the top layer concentrations.
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Appendix D. Reconstruction of Optical Coefficients Using Semi-Infinite Tissue Approximation

Semi
Figure A5. Comparison of percent errors in the reconstructed optical properties for the bilayered and semi-infinite (SI) models. The sub-figures (a) and (b), correspond to SDS = 2 and 2.5 cm respectively. The optical properties analyzed include the absorption coefficients of the first and second layers ( μ a 1 , μ a 2 ) and the reduced scattering coefficients of the first and second layers ( μ s 1 , μ s 2 ) labeled as groups along the x-axis.
Figure A5. Comparison of percent errors in the reconstructed optical properties for the bilayered and semi-infinite (SI) models. The sub-figures (a) and (b), correspond to SDS = 2 and 2.5 cm respectively. The optical properties analyzed include the absorption coefficients of the first and second layers ( μ a 1 , μ a 2 ) and the reduced scattering coefficients of the first and second layers ( μ s 1 , μ s 2 ) labeled as groups along the x-axis.
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Figure 1. (a) illustrates two-layer models for head and limb tissues. Each layer is represented as a cylinder having the same radius, but different thickness. All models used had fixed upper layer thickness of 1 cm. Tissue media were characterized the absorption ( μ a 1 , μ a 2 ) and reduced scattering coefficients ( μ s 1 , μ s 2 ), where layer 1 was the top layer. (b) time-resolved reflectance from a muscle tissue model obtained using MC (symbols), forward DT calculations (solid lines) and from inverse-fits (dashed lines) at SDS = 1.5 cm. Colors represent data for the same tissue model at three wavelengths used (indigo: 690 nm, orange: 760 nm and red: 850 nm).
Figure 1. (a) illustrates two-layer models for head and limb tissues. Each layer is represented as a cylinder having the same radius, but different thickness. All models used had fixed upper layer thickness of 1 cm. Tissue media were characterized the absorption ( μ a 1 , μ a 2 ) and reduced scattering coefficients ( μ s 1 , μ s 2 ), where layer 1 was the top layer. (b) time-resolved reflectance from a muscle tissue model obtained using MC (symbols), forward DT calculations (solid lines) and from inverse-fits (dashed lines) at SDS = 1.5 cm. Colors represent data for the same tissue model at three wavelengths used (indigo: 690 nm, orange: 760 nm and red: 850 nm).
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Figure 2. True versus reconstructed optical coefficients at 760 nm for absorption ( μ a 1 and μ a 2 in (a) and (c)) and reduced scattering coefficients ( μ s 1 , μ s 2 in (b) and (d)) across each of the 64 models for brain (squares) and the 64 models for muscle (triangles). Colors represent different SDS: red for 1.5 cm, orange for 2 cm and blue for 2.5 cm and the dashed black line represents the y = x line. The error bars represent the standard error across all models that share fixed values of each optical coefficient under investigation. It is important to note that there are six different markers each with its own error bar. Many of the error bars are smaller than the marker sizes used.
Figure 2. True versus reconstructed optical coefficients at 760 nm for absorption ( μ a 1 and μ a 2 in (a) and (c)) and reduced scattering coefficients ( μ s 1 , μ s 2 in (b) and (d)) across each of the 64 models for brain (squares) and the 64 models for muscle (triangles). Colors represent different SDS: red for 1.5 cm, orange for 2 cm and blue for 2.5 cm and the dashed black line represents the y = x line. The error bars represent the standard error across all models that share fixed values of each optical coefficient under investigation. It is important to note that there are six different markers each with its own error bar. Many of the error bars are smaller than the marker sizes used.
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Figure 3. Reconstructed [ d H b ] and [ H b O ] concentrations for muscle (blue) and brain (orange) at an SDS of 1.5 cm. The x-axis represents the true hemoglobin concentrations (not evenly spaced) computed from the model values derived from Table 1. While the y-axis shows the reconstructed (median) values. Subplots (a) and (b) represent the top layer and (c) and (d), the bottom layer reconstruction of [ d H b ] and [ H b O ] respectively. Each data bar in each plot represents sixteen models and the error-bar is the standard error across the models.
Figure 3. Reconstructed [ d H b ] and [ H b O ] concentrations for muscle (blue) and brain (orange) at an SDS of 1.5 cm. The x-axis represents the true hemoglobin concentrations (not evenly spaced) computed from the model values derived from Table 1. While the y-axis shows the reconstructed (median) values. Subplots (a) and (b) represent the top layer and (c) and (d), the bottom layer reconstruction of [ d H b ] and [ H b O ] respectively. Each data bar in each plot represents sixteen models and the error-bar is the standard error across the models.
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Figure 4. Reconstruction accuracy of SO 2 and [ T H b ] for different source-detector SDS in a two-layer model. (a) and (b) show the reconstructed (median) versus true values of SO 2 and [ T H b ] , respectively, for the top layer, while (c) and (d) display the same for the bottom layer. The colors represent different SDS values: 1.5 mm (red), 2 mm (orange), and 2.5 mm (blue). The dash black line represents the y = x line. The reconstruction for the top layer showed poor accuracy while the bottom layer reconstruction showed much better reconstructions, highlighting the effectiveness of DT to probe deeper tissue layers. These data were computed using reconstructed [ d H b ] and [ H b O ] values.
Figure 4. Reconstruction accuracy of SO 2 and [ T H b ] for different source-detector SDS in a two-layer model. (a) and (b) show the reconstructed (median) versus true values of SO 2 and [ T H b ] , respectively, for the top layer, while (c) and (d) display the same for the bottom layer. The colors represent different SDS values: 1.5 mm (red), 2 mm (orange), and 2.5 mm (blue). The dash black line represents the y = x line. The reconstruction for the top layer showed poor accuracy while the bottom layer reconstruction showed much better reconstructions, highlighting the effectiveness of DT to probe deeper tissue layers. These data were computed using reconstructed [ d H b ] and [ H b O ] values.
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Figure 5. Comparison of median percent error in reconstructed transport coefficients of bilayered media using a semi-infinite DT model. Each orange bar represents the median percent error in reconstructed absorption and scattering obtained from inverse SI DT model across the 384 bi-layered while the true value for each of the four coefficients (indicated by the axis labels) were those used to simulate R M C ( t ) . Error bars indicate the standard errors across the 384 models. The blue bars indicate these errors when reconstructions were done by using bilayered DT.
Figure 5. Comparison of median percent error in reconstructed transport coefficients of bilayered media using a semi-infinite DT model. Each orange bar represents the median percent error in reconstructed absorption and scattering obtained from inverse SI DT model across the 384 bi-layered while the true value for each of the four coefficients (indicated by the axis labels) were those used to simulate R M C ( t ) . Error bars indicate the standard errors across the 384 models. The blue bars indicate these errors when reconstructions were done by using bilayered DT.
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Table 1. Input parameters used to generate optical coefficients of each layer. Two [ T H b ] and SO 2 values were used for the top and bottom layers, along with two different values of A and b for the top and bottom layers. A total of 64 different models were generated at any one wavelength.
Table 1. Input parameters used to generate optical coefficients of each layer. Two [ T H b ] and SO 2 values were used for the top and bottom layers, along with two different values of A and b for the top and bottom layers. A total of 64 different models were generated at any one wavelength.
Tissue Model Layer T H b ( μ M ) S O 2 ( % ) A ( c m 1 ) b
Head Top [ 31.0 , 75.0 ] [ 60 , 98 ] [ 21.4 , 40.8 ] [ 1.200 , 3.100 ]
Bottom [ 33.0 , 65.0 ] [ 55 , 70 ] [ 9.5 , 20.9 ] [ 0.141 , 0.537 ]
Muscle Top [ 18.0 , 61.0 ] [ 50 , 90 ] [ 23.7 , 35.2 ] [ 0.385 , 0.988 ]
Bottom [ 27.0 , 50.0 ] [ 50 , 69 ] [ 13.0 , 9.8 ] [ 0.920 , 2.800 ]
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