Submitted:
28 April 2024
Posted:
29 April 2024
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Abstract
Keywords:
1. Introduction
- Provide a survey of recent studies on the understanding of biogenic reservoir souring, the controlling parameters and its mitigation.
- Emphasize on the importance of mineral scavenging for the retention of H2S in the reservoir based on a theoretical approach as well as laboratory measurements.
- Underline laboratory and numerical modelling efforts, approaches and success rates, exemplified via two application cases on a waterflooding and a microbial enhanced oil recovery (MEOR) technology project.
- Use of the Monte Carlo method as a pragmatic reservoir modelling approach with the associated uncertainties .
- Present and discuss a workflow that can be used in similar studies to assess the risks of biogenic souring and potential mitigation measures.
2. Biogenic Souring; Mechanisms And Impacts on Reservoir-Oil Production
3. Controlling Parameters of the Biogenic Souring In Oil Reservoirs
3.1. Microbiology: SRM in the Reservoir and/or Injected Water
3.2. Pressure and Temperature
3.3. Chemical-Physicochemical Conditions
3.3.1. Source of Carbon, Energy, and Nutrients
3.3.2. Salinity
3.3.3. Partitioning

3.3.4. pH
3.3.5. Rock Mineralogy/Formation Water Composition
3.4. Petrophysical Conditions
3.4.1. Permeability
3.4.2. Heterogeneity
4. Laboratory and Numerical Modelling Efforts-Types and Applications
4.1. Conceptual Reservoir Models of Biogenic Souring
4.1.1. Mixing Type Souring Pattern
4.1.2. Biofilm Formation
4.1.3. Thermal Viability Shell (TVS)
4.2. Model Implementations
5. Case Analyses
5.1. Case 1: A Field in North Sea under Seawater Flood
5.2. Case 2—An Onshore Field on a MEOR Application
- -
- Sulfate content of the injection/formation water: The sulfate content of both injection and formation water can be determined from the water analyses of injection and production waters. However, if sulfate is introduced by the injection water and if the formation water does not contain sulfate in the first place, it might be challenging to estimate the timely and spatial distribution of sulfate in the reservoir.
- -
- Amount of substrate available for SRB in the reservoir is a critical parameter and independent of whether SRB are found in injection water and/or found in the reservoir. In case of a typical MEOR application, VFAs are generated as the product of in-situ fermentation reactions and these are available in excess for the complete reduction of sulfate. In this case, they cannot be used in an uncertainty analysis.
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- Partitioning coefficients: The partitioning of the H2S between the phases in the reservoir as well as in the wellbore can be determined well if the compositions and thermodynamic conditions are known. Yet, a careful examination of the existing literature implies that there is still a margin of uncertainties, especially for the oil/water partitioning coefficients.
6. Mitigation of Biogenic Souring
6.1. Nitrate/Nitrite
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- The fundamental inhibition mechanisms are well understood, but the complex biological, biochemical, and abiotic interactions in a reservoir cannot be predicted fully. In recent studies [56], the inhibitory effect previously claimed to be due to nitrate injection on Gullfaks field could be assigned to mixing and biofilm models instead and was potentially not related to the nitrate application.
- -
- Continuous and well-defined dosages of high nitrate concentrations are needed for direct inhibition (>10 mM). A sub-optimal or insufficient nitrate treatment strategy may result in higher H2S production from production wells despite a lower total amount of generated H2S inside the reservoir; but unconsumed nitrate in case of excessive nitrate injection could increase the need for post-production water treatment [96].
- -
- -
- More recently, nitrate injection was also shown to result in so called microbial induced calcite precipitation (MICP), potentially causing injectivity problems in the field [98].
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- There are concerns that nitrate or nitrite can exacerbate corrosion due to their oxidizing potentials [99].
6.2. Molybdate
6.3. Perchlorate
6.4. Other Inhibitors

7. Workflow for the Assessment of Biogenic Souring
7.1. Step 1: Preliminary Assessment
7.2. Step 2: Modelling and Quantification
7.3. Step 3: Monitoring
8. Conclusions
- -
- Technological developments in microbiology and petroleum industry simulation tools and techniques provide a sufficiently good analytical background. State-of-the-art numerical tools can support the prediction of H2S formation and its spatial and temporal distribution in the reservoir, as well as its production characteristics in terms of safety in surface facilities. However, as with all numerical simulation studies, the predictive capability depends heavily on the reliability and representativeness of the model created. The process of calibrating the model requires high-quality, reliable data from theoretical work, chemical-physical modelling and field measurements.
- -
- H2S retention in the reservoir can be significant if reservoir rock contains iron-bearing minerals like siderite; as shown for a MEOR case analysis even a minor siderite content can inhibit the H2S generation totally. The assessment of the mineral scavenging needs representative static (batch) and dynamic (sand packs, core floods) laboratory investigations. The composition of reservoir brine as well as H2S partitioning into water and oil phases can also play a significant role in the retention of H2S in the reservoir, thus decreasing topside-associated risks.
- -
- Considering the uncertainties in the associated inputs as well as in the geological unknowns, the use of the Monte Carlo method is suggested for the numerical evaluation, where the uncertainties of each associated parameter can be considered to define the H2S production in terms of a probability distribution. Due to high uncertainty, mineral scavenging is a natural candidate for this analysis, followed by sulfate content of injection and formation waters, partitioning and petrophysical parameters. State-of-the-art commercial reservoir simulators provide user friendly interactive codes for such analysis.
- -
- Nitrate and nitrite are the best-known and best-studied chemicals for biogenic souring inhibition, although their reported effectiveness in field applications is controversial. Molybdate and perchlorate are the emerging candidates for SRB inhibition, but further investigation is needed for safe and economical applications.
- -
- A workflow for assessing and managing biogenic souring in oil reservoirs during secondary and tertiary oil recovery is presented. The best strategy to control reservoir souring is to manage the issue proactively and as early as possible, ideally before any souring is detected; a quick analytical analysis based on relevant parameters can give a reliable preliminary insight on the probability and magnitude of the reservoir souring. If the risk is evident, the workflow should be followed to assess, predict, and mitigate the souring through case-specific surface and subsurface actions. The workflow provides a continuous cyclic process to improve the quality of the assessment and decision based on new laboratory and field data in each cycle.
Abbreviations, Symbols
| ATP | Adenosine triphosphate |
| avr | Average |
| BAC | Benzalkonium chloride |
| BTEX | Benzene, toluene, ethylbenzene, and xylene (light aromatics) |
| DOC | Dissolved organic carbon |
| DP | Dykstra–Parsons coefficient |
| FW | Formation water |
| HSE | Health, safety, and environment |
| k | Permeability, mD |
| Kow,og,wg | Partitioning coefficient (of H2S), oil-water, oil-gas, water-gas, fraction |
| KS | Monod equation; half rate constant representing at which the rate is rmax/2 , g/L |
| m | Milli |
| M | Molar |
| MEOR | Microbial enhanced oil recovery |
| MIC | Microbially induced corrosion |
| MICP | Microbial induced calcite precipitation |
| MPN | Most probable number |
| NRB | Nitrate reducing bacteria |
| P | Pressure, bar |
| P10 | Monte-Carlo simulation, low probability case |
| P50 | Monte-Carlo simulation, mean probability case |
| P90 | Monte-Carlo simulation, high probability case |
| ppmv | Part per million in gas (vapor) phase |
| ppmw | Part per million in water phase |
| PV | Pore volume, m3 |
| PWRI | Produced water re-injection |
| qFISH | Quantitative Fluorescent In Situ Hybridization |
| qPCR | Quantitative Polymerase Chain Reaction |
| rg | Monod equation; specific growth rate, hour-1 |
| RINC | Required inhibitory nitrate concentration; mM |
| rmax | Monod equation; maximum growth rate, hour-1 |
| RT-qPCR | Reverse transcription qPCR |
| S | Monod equation; (limiting) substrate concentration, g/L |
| SCI | Sulfur cycle intermediates |
| SRA | Sulfate reducing archaea |
| SRB | Sulfate reducing bacteria |
| SRM | Sulfate reducing microorganism |
| T | Temperature, °C |
| TDS | Total dissolved solids, g/L |
| TVS | Thermal viability shell |
| VFA | Volatile fatty acids |
| wt. | Weight |
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
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| Type of evaluation | Rock type | H2S retention [mg/g] | Reference |
| Dynamic | Cores from various reservoirs, k=5,200 mD | 0.014 | [48] |
| Dynamic | Cores from various reservoirs, k=0.4 mD | 0.0196 | [48] |
| Dynamic | Cores from various reservoirs, k=8,200 mD | 0.55 | [48] |
| Dynamic | Cores from various reservoirs, k=740 mD | 1.95 | [48] |
| Static | Crushed cores with siderite content (<814 mm) | 0.24 | [49] |
| Dynamic | Cores with siderite content; from the available data | 0.003 | [49] |
| Static | Crushed rock (100-315 mm) with 20% wt siderite | 0.5 - 3.7 | [47] |
| Static | Crushed rock (<100 mm) with 20% wt siderite | 2.08 - 9.70 | [47] |
| Dynamic | Sand packs filled with sand with 4% wt siderite | 1.03 - 1.74 | [47] |
| Dynamic | Sand packs filled with formation rock with 10% wt. siderite | 0.14 | [27] |
| Theoretical | Based on stoichiometry for 1% wt siderite content | 0.34 | This study |
| Parameter | Range, influence |
| Solubility H2S | Higher in oil than in water; higher in complex oil compositions containing asphaltenes, aromatics, lower in brines with increasing salinities |
| Partitioning, Kow, Kog, Kwg | Depending on the H2S solubility in oil and water phases, salinity, temperature, pressure, pH |
| pH | Over reservoir typical ranges, not relevant for the activation of SRB in oil reservoirs. The higher the pH, the higher the solubility in water, thus lower the Kow |
| Water chemistry | Divalent cations in the formation water may precipitate with both sulfate (Ba2+, Sr2+ , Ca2+) and sulfide (Fe2+, Zn2+), acting as scavengers |
| Rock mineralogy | The presence of iron-bearing minerals is crucial for the in-situ retention of H2S by precipitation |
| Temperature | Most SRB are not active at temperatures higher than 80°C |
| Pressure | Not relevant effect on SRB activity for most common pressures in oilfields, therefore no relevant effect on H2S generation |
| Sulfate | One of the main components of biogenic souring, concentration has a strong impact on the possible H2S concentration generated |
| Salinity | Certain SRB species live in higher salinity brines up to ca. 180 g/L; H2S solubility in water decreases as the salinity increases (salting-out effect) |
| Presence of SRB | If no indigenous SRB exist in the reservoir no biogenic souring is expected - however SRB can be introduced with injection water |
| Permeability | Low permeability, small pore radius limits the transport of microbes therefore their planktonic movement; no relevant effect on H2S transport once generated |
| Heterogeneity | Important for the transport of SRB and H2S; if high, less retention in the reservoir and rapid breakthrough of H2S to the producers can be expected |
| Carbon sources | Completes the souring reaction; VFA can be an important source; oil components may also be a nutrient source for SRB |


| Property | Data |
| Formation salinity | Injection water: highly saline, up to 160 g/L, sulfate content around 70 mg/L. Produced water: highly saline up to 180 g/L, no detectable sulfate |
| Formation rock mineralogy | Sandstone with siderite content of 2-10% wt. |
| SRB | Microbiological analysis of the samples from the field confirmed the presence of Desulfovibrionales (Desulfohalobiaceae) in produced water as well as in injection water; the field is under PWRI |
| Organic acids, VFA | Organic acids (e.g., acetate, lactate, formate) are products of the MEOR process. Their amount is high enough for complete reduction of the available sulfate by SRB |
| Pressure | 30-70 bar under reservoir conditions; no detrimental effect on the SRB |
| Temperature | Injection water, calculated at bottom hole 20-25°C during injection, reservoir temperature between 37° and 41°C. Since SRB are present in the reservoir already, they can be active in a range valid for the reservoir studied |
| pH | Formation water pH~6.5, VFA due to MEOR can reduce the pH down to 5 (not considering pH-buffering effects of the formation rock); pH is in the range still allowing the activity of SRB |
| Permeability | Average permeability and the pore diameter are kavr 300 mD and 20 m successively. This is high enough for the free movement of the SRB throughout the reservoir. On the other hand, the reservoir is highly heterogeneous |
| Injection rate | 150 m3/day, including a defined concentration of nutrients for in-situ MEOR |
| Partitioning coefficient | Based on high salinity formation water and with the assumption of a pH of 6, Kow is taken as 30 in the base case |
| GRID | CORNER POINT |
|---|---|
| Number of cells | 36(x)*31(y)*16(z) |
| Cell size Refinement |
50 x 50 x 1.3 m 10 x 10 x 1.3 |
| Porosity | 0.018 - 0.291 |
| Permeability | 1 – 6130 mD (5 rock types) |

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