Preprint Article Version 1 Preserved in Portico This version is not peer-reviewed

Correlation of Pseudomonas aeruginosa Phage Resistance with Numbers and Types of Antiphage Systems

Version 1 : Received: 15 December 2023 / Approved: 18 December 2023 / Online: 18 December 2023 (10:12:18 CET)

A peer-reviewed article of this Preprint also exists.

Burke, K.A.; Urick, C.D.; Mzhavia, N.; Nikolich, M.P.; Filippov, A.A. Correlation of Pseudomonas aeruginosa Phage Resistance with the Numbers and Types of Antiphage Systems. Int. J. Mol. Sci. 2024, 25, 1424. Burke, K.A.; Urick, C.D.; Mzhavia, N.; Nikolich, M.P.; Filippov, A.A. Correlation of Pseudomonas aeruginosa Phage Resistance with the Numbers and Types of Antiphage Systems. Int. J. Mol. Sci. 2024, 25, 1424.

Abstract

Phage therapeutics offer a potentially powerful approach to combat multidrug-resistant bacterial infections. However, to be effective, phage therapy must overcome existing and developing phage resistance. While phage cocktails can reduce this risk by targeting multiple receptors in a single therapeutic, bacteria have mechanisms of resistance beyond receptor modification. A rapidly growing body of knowledge describes a broad and varied arsenal of antiphage systems encoded by bacteria to counter phage infection. We sought to understand the types and frequencies of antiphage systems present in a highly diverse panel of Pseudomonas aeruginosa clinical isolates utilized to characterize novel antibacterials. Using web-server tool PADLOC (Prokaryotic Antiviral Defense Locator), putative antiphage systems were identified in these P. aeruginosa clinical isolates based on sequence homology to a validated and curated catalog of known defense systems. Coupling this host bacterium sequence analysis with host range data for 70 phages, we observed a correlation between existing phage resistance and the presence of higher numbers of antiphage systems in bacterial genomes. We were also able to identify antiphage systems that were more prevalent in highly phage-resistant P. aeruginosa strains, suggesting their importance in conferring the resistance.

Keywords

Pseudomonas aeruginosa; phage therapy; phage resistance; PADLOC; antiphage systems; antiphage systems/phage resistance correlation

Subject

Biology and Life Sciences, Immunology and Microbiology

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