Submitted:
12 October 2023
Posted:
13 October 2023
You are already at the latest version
Abstract
Keywords:
1. Introduction
2. Materials and Methods
2.1. Animals, chemicals, and experimental design
2.2. Physiological and biochemical indicator detection
2.3. Histological Evaluation
2.4. RNA isolation and sequencing
2.5. Transcriptome assembly, annotation and analysis
2.6. Statistical analysis
3. Results
3.1. Acute toxicity effects of BF on CGS larvae
3.2. Oxidative stress injury of BF exposure on CGS larvae
3.3. DNA damage of BF exposure on CGS larvae
3.4. Effects of BF on liver tissue of CGS
3.5. Transcriptome sequencing and sequence assembly
3.6. Annotation and classification of functional genes
3.7. Effects of BF on gene expression and functional enrichment of CGS larvae
4. Discussion
4.1. Effects of BF on the acute toxicity of CGS larvae
4.2. Effects of BF on oxidative stress in CGS larvae
4.3. Effects of BF on DNA damage in CGS larvae
4.4. Effects of BF on the live tissue of CGS larvae
5. Conclusions
Abbreviations
References
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| BF concentration | average mortality | LC50 and 95% confidence interval (μg/L) | SC(μg/L) | ||||||
| (μg/L) | 24h | 48h | 72h | 96h | 24 h | 48 h | 72 h | 96 h | |
| 6.25 | 0 | 0 | 33 | 33 | 50 (31.3-79.9) |
27.4 (18.2-42.7) |
12.5 (7.6-20.9) |
9.9 (6.8-14.4) |
2.47 |
| 12.5 | 0 | 17 | 50 | 50 | |||||
| 25 | 0 | 17 | 67 | 100 | |||||
| 50 | 50 | 100 | 100 | 100 | |||||
| Trendline formula | r2 value | Trendline formula | r2 value | |||
| ATP_B | y = -0.0755x + 0.4131 | R² = 0.931 | GSH_L | y = -0.0209x + 0.0731 | R² = 0.8685 | |
| ATP_L | y = -0.0106x + 0.0379 | R² = 0.8799 | ROS_L | y = 0.4x + 0.6271 | R² = 0.995 | |
| ATP_K | y = -0.0829x + 0.5667 | R² = 0.9573 | ROS_K | y = 0.4864x + 0.468 | R² = 0.9712 | |
| SOD_K | y = -0.0785x + 0.2643 | R² = 0.8854 | ROS_B | y = 0.5165x + 0.4052 | R² = 0.9399 | |
| SOD_L | y = -0.0267x + 0.1047 | R² = 0.8218 | CAT_L | y = -0.0375x + 0.1615 | R² = 0.9167 | |
| SOD_B | y = -0.0266x + 0.1724 | R² = 0.9779 | CAT_B | y = -0.0221x + 0.1306 | R² = 0.9338 | |
| MDA_K | y = 0.004x + 0.0076 | R² = 0.9905 | CAT_K | y = -0.0279x + 0.1293 | R² = 0.9673 | |
| MDA_L | y = 0.005x + 0.0059 | R² = 0.9954 | 8OHdG_L | y = 0.4064x + 0.2127 | R² = 0.9342 | |
| MDA_B | y = 0.0137x + 0.0246 | R² = 0.9869 | 8OHdG_K | y = 0.4601x + 1.2092 | R² = 0.9976 | |
| GSH_K | y = -0.0208x + 0.0718 | R² = 0.9063 | 8OHdG_B | y = 0.6372x + 0.6869 | R² = 0.9528 | |
| GSH_B | y = -0.0219x + 0.0746 | R² = 0.9171 |
| Sample | RawData(bp) | CleanData(bp) | BF_Q20(%) | BF_Q30(%) | BF_N(%) | BF_GC(%) |
| C1 | 8570323500 | 8497016973 | 8355229789 (97.49%) | 7983356593 (93.15%) | 10573 (0.00%) | 4077935926 (47.58%) |
| C2 | 7961443200 | 7884980846 | 7793418743 (97.89%) | 7492472384 (94.11%) | 9793 (0.00%) | 3840803534 (48.24%) |
| C3 | 6180859800 | 6105641190 | 6025557130 (97.49%) | 5771472897 (93.38%) | 118099 (0.00%) | 3026098542 (48.96%) |
| L1 | 7345199100 | 7274677825 | 7145634845 (97.28%) | 6803656228 (92.63%) | 440332 (0.01%) | 3484409085 (47.44%) |
| L2 | 8742854100 | 8652131352 | 8529881816 (97.56%) | 8169319937 (93.44%) | 10794 (0.00%) | 4272687470 (48.87%) |
| L3 | 6757273800 | 6685690560 | 6590896525 (97.54%) | 6309314726 (93.37%) | 8150 (0.00%) | 3268687270 (48.37%) |
| H1 | 6501689700 | 6423849792 | 6344224703 (97.58%) | 6079349482 (93.50%) | 6252 (0.00%) | 3173485621 (48.81%) |
| H2 | 6997675200 | 6924181647 | 6848480651 (97.87%) | 6587767854 (94.14%) | 6671 (0.00%) | 3363836583 (48.07%) |
| H3 | 6005677500 | 5932246189 | 5878549135 (97.88%) | 5654044512 (94.14%) | 5660 (0.00%) | 2893276454 (48.18%) |
| Number of Unigenes | Percentage(%) | |
| Nr | 30931 | 35.17 |
| KEGG | 29913 | 34.01 |
| KOG | 15458 | 17.57 |
| SwissProt | 19999 | 22.74 |
| annotation genes | 31728 | 36.07 |
| without annotation gene | 56230 | 63.93 |
| Total Unigenes | 87958 | 100.00 |
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