Submitted:
16 May 2026
Posted:
18 May 2026
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Abstract

Keywords:
1. Introduction
- Multi-source dataset integration. We integrate heterogeneous audio recordings from three distinct sources—Hiveeyes, LongHive, and the USM Bee Lab—representing different recording conditions, geographical locations, and bee subspecies. This cross-source design enhances the ecological validity and generalizability of the models, addressing a major limitation of prior studies that rely on single, controlled datasets.
- Systematic comparison of ML and DL approaches. We conduct a comprehensive evaluation of both classical ML algorithms and DL architectures under a unified preprocessing pipeline. This comparison clarifies the relative strengths of shallow versus hierarchical models for acoustic pattern recognition in noisy field data.
- Feature study across multiple temporal resolutions. The research examines three complementary acoustic representations—spectrogram, Mel-spectrogram, and MFCCs, applied to short audio segments of 1, 2, and 3 seconds. This design provides insights into the trade-off between temporal context and computational efficiency, revealing how perceptually motivated features (Mel, MFCC) perform under constrained time windows.
- Field validation under real environmental noise. Unlike previous laboratory-based experiments, we validate the models using in-situ recordings from active hives located in urban environments. These datasets include realistic background noise (vehicular traffic, ambient sounds), demonstrating the robustness and applicability of the proposed system under operational field conditions.
2. Related Work
2.1. Acoustic Monitoring of Hives
2.2. Machine Learning on Hive Audio
2.3. Deep Learning for Audio/Spectrograms
2.4. Multimodal Systems (Sound and Environmental Sensors)
2.5. Synthesis and Gap
3. Materials and Methods
3.1. Datasets
- December 2nd 2022: twenty recordings were collected, one of them corresponds to Hive A (recorded on the phone) and the rest correspond to Hive B (recorded on the laptop and phone). The minimum audio duration is 8 [s] and the maximum duration is 1:00:21 hr. The extension of the audio files obtained from Hive A is .m4a and the extension of the audio files obtained from Hive B is .mp3 and .m4a.
- December 9th 2022: fifty six recordings were collected, twenty one of them correspond to Hive A (recorded on the laptop) and the rest correspond to Hive B (recorded on the phone). The minimum audio duration is 26 [s] and the maximum duration is 600 [s]. The extension of the audio files obtained from Hive A is .mp3 and the extension of the audio files obtained from Hive B is .m4a. By combining the audio files obtained from the Hive A and Hive B mentioned above, there are approximately 5:30 hr of recordings of bee buzzing.
3.1.1. Labeling
3.2. Audio characterization
3.3. Detection of anomalies in bee hives based on human audition and IA
3.4. Preprocessing
3.4.1. Feature Extraction
3.4.2. Feature Selection
3.5. Models
Experimental Setup
3.5.1. Metrics
3.6. Statistical Validation
4. Results
4.1. Overview
4.2. Impact of Class Imbalance and Agreement Beyond Chance
4.3. Effect of Segment Length (1 s vs 2 s vs 3 s)
4.4. Perceptually Scaled Acoustic Features and Colony Behaviour
4.5. Feature-Type Comparison and Analysis
4.6. Model Comparison and Performance
4.7. Precision–Recall Trade-Off Analysis
4.8. Statistical Validation
4.9. Implications for Beekeeping Practice
5. Discussion
5.1. Interpretation of Findings
5.2. Comparison with Prior Work
5.3. Applications and Deployment
5.4. Limitations
5.5. Future Work
6. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| AI | Artificial Intelligence |
| CNN | Convolutional Neural Network |
| DL | Deep Learning |
| MFCC | Mel-Frequency Cepstral Coefficients |
| XGB | Extreme Gradient Boosting |
| SVM | Support Vector Machine |
| MLP | Multilayer Perceptron |
Appendix A
Appendix A.1
| Accuracy | Precision | Recall | F1-Score | Kappa | |||
|---|---|---|---|---|---|---|---|
| 1[s] | SPECTROGRAM | SVM | |||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MEL SPECTROGRAM | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC AMPLITUDE | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC MEL SPEC | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| 2[s] | SPECTROGRAM | SVM | |||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MEL SPECTROGRAM | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC AMPLITUDE | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC MEL SPEC | SVM | ||||||
| XBG | |||||||
| MLP | |||||||
| CNN | |||||||
| 3[s] | SPECTROGRAM | SVM | |||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MEL SPECTROGRAM | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC AMPLITUDE | SVM | ||||||
| XBG | |||||||
| MLP | |||||||
| CNN | |||||||
| MFCC MEL SPEC | SVM | ||||||
| XGB | |||||||
| MLP | |||||||
| CNN |
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| Method | Description |
|---|---|
| Discrete Fourier Transform (DFT) | A mathematical transformation that converts a time-domain signal into its frequency-domain representation [40]. In this study, it is used to analyse colony buzz recordings by expressing signal amplitude as a function of frequency. |
| Fast Fourier Transform (FFT) | A family of efficient algorithms for computing the DFT with computational complexity , most commonly implemented using the Cooley–Tukey algorithm [41]. Widely applied in audio and image signal processing. |
| Spectrogram | A time–frequency representation obtained by applying the DFT (typically via FFT) over successive signal windows. Time is shown on the X-axis, frequency on the Y-axis, and signal energy is represented by colour intensity, supporting feature extraction and acoustic analysis. |
| Mel Scale | A perceptual frequency scale reflecting human auditory sensitivity, where frequencies below 1000 Hz are perceived linearly and higher frequencies logarithmically, emphasizing discrimination at lower frequencies. |
| Mel Spectrogram | A spectrogram whose frequency axis is transformed using the Mel scale, providing a perceptually motivated representation of sound. Time is shown on the X-axis, Mel-scaled frequency on the Y-axis, and intensity is measured in decibels. |
| Mel-Frequency Cepstral Coefficients (MFCCs) | Compact feature representations derived from Mel-scaled spectra, widely used in speech and bioacoustic analysis due to their alignment with human auditory perception. |
| Category | Model | Description |
|---|---|---|
| ML | Extreme Gradient Boosting (XGBoost, XGB) | Ensemble learning method based on gradient-boosted decision trees, optimised through regularisation and tree pruning to improve predictive performance and generalisation; widely applied in structured data classification and bioacoustic monitoring tasks. |
| ML | Support Vector Machine (SVM) | Margin-based classifier effective in high-dimensional feature spaces; commonly employed for acoustic and bioacoustic classification problems. |
| DL | Convolutional Neural Network (CNN) | Neural architecture capable of learning hierarchical spatial patterns from time–frequency representations such as spectrograms; well suited for acoustic analysis in hive monitoring. |
| DL | Multilayer Perceptron (MLP) | Fully connected neural network that models non-linear relationships between extracted features; used as a baseline deep learning approach for classification tasks. |
| Step | Description |
|---|---|
| Objective | Build, train, and evaluate convolutional models for queen-presence classification using short hive-audio segments with MFCC and spectrogram-based features under realistic noise conditions. |
| Data Sources | Multi-source audio from Hiveeyes (Berlin, 11 hives, 20 recordings, .mp3, 44,100 Hz), LongHive, and USM Bee Lab (Valparaíso). Classes: CA (queen present), SA (queen absent). |
| Labeling | Files renamed as #-status (# unique ID; status ). Label balance verified per source and segment length. |
| Segmentation | Recordings split into 1, 2, and 3 s windows (non-overlapping). Datasets created per duration and divided into 80% training and 20% testing sets. |
| Feature Extraction | Using librosa: (1) Logarithmic spectrograms, (2) Mel spectrograms, (3) MFCCs from waveform (13, 20, 40), (4) MFCCs from Mel spectrogram (13, 20, 40). Visualized with matplotlib. |
| Feature Selection | Focused on perceptual features (Mel, MFCCs) consistent with human hearing; log-spectrogram included as baseline control. |
| Modeling Approach | Adopted pre-existing CNN architecture (by mikesmales) for MFCC matrices. Transfer learning considered but unnecessary after direct training on generated datasets. |
| CNN Architectures | Model A: native for 40 MFCCs (trainable with 20). Model B: adapted version supporting 13/20/40 MFCCs by removing final Conv/Pooling/Dropout layers. Both tested on log- and Mel-spectrograms. |
| Hyperparameters | Activations: ReLU (hidden), Softmax (output); Loss: categorical cross-entropy; Optimizer: Adam; Epochs: 72; Batch size: 32; Dropout: 0.2. Dense layers—Model A: 80–2080–8256–32896–258; Model B: 80–2080–8256–130. |
| Training Protocol | Separate runs per feature type (MFCC 13/20/40, log-, Mel-spectrogram) and segment duration (1/2/3 s). Training on Google Colab GPU. Accuracy used as main metric. |
| Evaluation | Metrics: accuracy, precision, recall, specificity (Eqs. 1–4). Confusion matrices generated for best models. |
| Reproducibility | Implemented in Python (librosa, numpy, matplotlib, TensorFlow/Keras or PyTorch). Random seeds fixed; configurations logged per run. |
| Artifacts | Trained weights, logs, and evaluation outputs stored. Best model and preprocessing pipeline exported for deployment. |
| Metric | Formula | Description |
|---|---|---|
| Accuracy | Proportion of correctly classified instances among all samples. | |
| Precision | Fraction of predicted positives that are truly positive (model reliability). | |
| Recall | Ability of the model to identify all positive (queen-present) cases. | |
| F1-score | Harmonic mean of precision and recall, balancing false positives and false negatives in queen-presence classification. | |
| Cohen’s Kappa | Agreement between predicted and true labels corrected for chance, derived from the confusion matrix marginals. |
| Segment | Feature | Model | Accuracy | Precision | Recall | F1-score | Kappa |
|---|---|---|---|---|---|---|---|
| 1 s | Spectrogram | SVM | |||||
| Mel-spectrogram | XGB | ||||||
| MFCC (Amplitude) | SVM | ||||||
| MFCC (Mel) | CNN | ||||||
| 2 s | Spectrogram | XGB | |||||
| Mel-spectrogram | XGB | ||||||
| MFCC (Amplitude) | SVM | ||||||
| MFCC (Mel) | XGB | ||||||
| 3 s | Spectrogram | SVM | |||||
| Mel-spectrogram | XGB | ||||||
| MFCC (Amplitude) | NB | ||||||
| MFCC (Mel) | SVM |
| Segment | Feature | Model | Accuracy (95% CI) |
|---|---|---|---|
| 1 s | Spectrogram | SVM | [0.202–0.298] |
| Mel-spectrogram | XGB | [0.581–0.635] | |
| MFCC (Amplitude) | SVM | [0.625–0.635] | |
| MFCC (Mel) | CNN | [0.707–0.745] | |
| 2 s | Spectrogram | XGB | [0.234–0.600] |
| Mel-spectrogram | XGB | [0.587–0.595] | |
| MFCC (Amplitude) | SVM | [0.615–0.659] | |
| MFCC (Mel) | XGB | [0.681–0.783] | |
| 3 s | Spectrogram | SVM | [0.548–0.760] |
| Mel-spectrogram | XGB | [0.633–0.647] | |
| MFCC (Amplitude) | NB | [0.572–0.592] | |
| MFCC (Mel) | SVM | [0.687–0.707] |
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