Submitted:
20 November 2025
Posted:
21 November 2025
You are already at the latest version
Abstract
Keywords:
1. Introduction
2. Materials and Methods
2.1. Chemicals and Reagents
2.2. Extraction and Quantification of PB1 in Cyperus esculentus Stems and Leaves
2.3. Chicken Feeding Test for CELE
2.4. Cell Treatment and LPS Stimulation
2.5. High-Throughput Sequencing
2.6. Identification of Key Transcription Factors
2.7. Real-Time Polymerase Chain Reaction (Real-Time PCR) Analysis
2.8. Antioxidant Enzyme Assay
2.9. Enzyme-Linked Immunosorbent Assay
2.10. ROS Detection
2.11. Polarization Analysis of HD11 Cells
3. Results
3.1. Effects of ECLE on Growth Performance, Blood Antioxidant Capacity, and Inflammatory Cytokines in Broiler Chickens
3.2. PB1-Mediated Transcriptome Reprogramming of HD11 Cells
3.3. Key Transcription Factors Regulated by PB1 in LPS-Stimulated HD11 Cells
3.4. The Expression Levels of Transcription Factors and Their Target Genes
3.5. Effect of PB1 on Cytokine Production in HD11 Cells
3.6. Effects of PB1 on ROS Production in HD11 Cells
3.7. Levels of M1/M2 Polarization Markers in HD11 Cells
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| PB1 | Procyanidin B1 |
| GenAI | Generative artificial intelligence |
| STAT 1 | Signal transducer and activator of transcription 1 |
| STAT 2 | Signal transducer and activator of transcription 1 |
| STAT 3 | Signal transducer and activator of transcription 3 |
| HIF-1 | Hypoxia-inducible factor-1 |
| FOSL 1 | Fos-Related Antigen 1 |
References
- Dixon, R.A.; Xie, D.-Y.; Sharma, S.B. Proanthocyanidins—A final frontier in flavonoid research? New Phytol. 2005, 165, 9–28. [Google Scholar] [CrossRef]
- Cos, P.; Bruyne, T.; Hermans, N.; Apers, S.; Berghe, D.; Vlietinck, A. Proanthocyanidins in Health Care: Current and New Trends. Curr. Med. Chem. 2004, 11, 1345–1359. [Google Scholar] [CrossRef] [PubMed]
- Fernández-Iglesias, A.; Pajuelo, D.; Quesada, H.; Díaz, S.; Bladé, C.; Arola, L.; Salvadó, M.J.; Mulero, M. Grape seed proanthocyanidin extract improves the hepatic glutathione metabolism in obese Zucker rats. Mol. Nutr. Food Res. 2013, 58, 727–737. [Google Scholar] [CrossRef]
- Rajput, S.A.; Sun, L.; Zhang, N.-Y.; Khalil, M.M.; Ling, Z.; Chong, L.; Wang, S.; Rajput, I.R.; Bloch, D.M.; Khan, F.A.; et al. Grape Seed Proanthocyanidin Extract Alleviates AflatoxinB1-Induced Immunotoxicity and Oxidative Stress via Modulation of NF-κB and Nrf2 Signaling Pathways in Broilers. Toxins 2019, 11, 23. [Google Scholar] [CrossRef] [PubMed]
- Rigotti, M.; Cerbaro, A.F.; da Silva, I.D.R.; Agostini, F.; Branco, C.S.; Moura, S.; Salvador, M.A.-O. Grape seed proanthocyanidins prevent H(2)O(2)-induced mitochondrial dysfunction and apoptosis via SIRT 1 activation in embryonic kidney cells. J. Food Biochem. 2020, 44, e13147. [Google Scholar] [CrossRef]
- Zhou, S.; Zhao, A.; Wu, Y.; Mi, Y.; Zhang, C. Protective Effect of Grape Seed Proanthocyanidins on Oxidative Damage of Chicken Follicular Granulosa Cells by Inhibiting FoxO1-Mediated Autophagy. Front. Cell Dev. Biol. 2022, 10, 762228. [Google Scholar] [CrossRef] [PubMed]
- Liu, H.-J.; Pan, X.-X.; Liu, B.-Q.; Gui, X.; Hu, L.; Jiang, C.-Y.; Han, Y.; Fan, Y.-X.; Tang, Y.-L.; Liu, W.-T. Grape seed-derived procyanidins alleviate gout pain via NLRP3 inflammasome suppression. J. Neuroinflammation 2017, 14, 1–10. [Google Scholar] [CrossRef]
- Liu, Y.; Sun, R.; Lin, X.; Wu, L.; Chen, H.; Shen, S.; Li, Y.; Wei, Y.; Deng, G. Procyanidins and its metabolites by gut microbiome improves insulin resistance in gestational diabetes mellitus mice model via regulating NF-κB and NLRP3 inflammasome pathway. Biomed. Pharmacother. 2022, 151, 113078. [Google Scholar] [CrossRef]
- Wang, Q.-Q.; Gao, H.; Yuan, R.; Han, S.; Li, X.-X.; Tang, M.; Dong, B.; Li, J.-X.; Zhao, L.-C.; Feng, J.; et al. Procyanidin A2, a polyphenolic compound, exerts anti-inflammatory and anti-oxidative activity in lipopolysaccharide-stimulated RAW264.7 cells. PLOS ONE 2020, 15, e0237017. [Google Scholar] [CrossRef]
- Han, S.; Gao, H.; Chen, S.; Wang, Q.; Li, X.; Du, L.-J.; Li, J.; Luo, Y.-Y.; Li, J.-X.; Zhao, L.-C.; et al. Procyanidin A1 Alleviates Inflammatory Response induced by LPS through NF-κB, MAPK, and Nrf2/HO-1 Pathways in RAW264.7 cells. Sci. Rep. 2019, 9, 1–13. [Google Scholar] [CrossRef]
- Hu, B.; Liu, S.; Luo, Y.; Pu, J.; Deng, X.; Zhou, W.; Dong, Y.; Ma, Y.; Wang, G.; Yang, F.; et al. Procyanidin B2 alleviates uterine toxicity induced by cadmium exposure in rats: The effect of oxidative stress, inflammation, and gut microbiota. Ecotoxicol. Environ. Saf. 2023, 263, 115290. [Google Scholar] [CrossRef] [PubMed]
- Wang, C.; Xia, W. Proanthocyanidin Regulates NETosis and Inhibits the Growth and Proliferation of Liver Cancer Cells—In Vivo, In Vitro and In Silico Investigation. Cell Biochem. Biophys. 2024, 83, 1223–1235. [Google Scholar] [CrossRef]
- Deng, C.; Zhai, Y.; Yang, X.; Chen, Z.; Li, Q.; Hao, R. Effects of grape seed procyanidins on antioxidant function, barrier function, microbial community, and metabolites of cecum in geese. Poult. Sci. 2023, 102, 102878. [Google Scholar] [CrossRef]
- Wu, Y.; Ma, N.; Song, P.; He, T.; Levesque, C.; Bai, Y.; Zhang, A.; Ma, X. Grape Seed Proanthocyanidin Affects Lipid Metabolism via Changing Gut Microflora and Enhancing Propionate Production in Weaned Pigs. J. Nutr. 2019, 149, 1523–1532. [Google Scholar] [CrossRef]
- Cao, G.; Zeng, X.; Liu, J.; Yan, F.; Xiang, Z.; Wang, Y.; Tao, F.; Yang, C. Change of Serum Metabolome and Cecal Microflora in Broiler Chickens Supplemented With Grape Seed Extracts. Front. Immunol. 2020, 11. [Google Scholar] [CrossRef] [PubMed]
- Yu, G.; Fu, X.; Gong, A.; Gu, J.; Zou, H.; Yuan, Y.; Song, R.; Ma, Y.; Bian, J.; Liu, Z.; et al. Oligomeric proanthocyanidins ameliorates osteoclastogenesis through reducing OPG/RANKL ratio in chicken’s embryos. Poult. Sci. 2024, 103, 103706. [Google Scholar] [CrossRef] [PubMed]
- Lei, Y.; Deng, X.; Zhang, Z.; Chen, J. Natural product procyanidin B1 as an antitumor drug for effective therapy of colon cancer. Exp. Ther. Med. 2023, 26, 1–8. [Google Scholar] [CrossRef]
- Ma, J.; Feng, X.; Shan, C.; Ma, Y.; Lu, Z.; Zhang, D.; Ma, C. Quantification and purification of procyanidin B1 from food byproducts. J. Food Sci. 2022, 87, 4905–4916. [Google Scholar] [CrossRef]
- Na, W.; Ma, B.; Shi, S.; Chen, Y.; Zhang, H.; Zhan, Y.; An, H. Procyanidin B1, a novel and specific inhibitor of Kv10.1 channel, suppresses the evolution of hepatoma. Biochem. Pharmacol. 2020, 178, 114089. [Google Scholar] [CrossRef] [PubMed]
- Ma, J.; Feng, X.; Meng, H.; Ma, Y.; Zhang, X.; Zhang, D.; Lu, Z.; Xu, H.; Ma, C. Chemical Constituents of Cyperus esculentus Leaves and the Protective Effect against Agricultural Fungicide-Induced Hepatotoxicity. Chem. Biodivers. 2022, 19, e202200531. [Google Scholar] [CrossRef] [PubMed]
- Yonekura, L.; Tamura, H. A fast and sensitive isocratic high performance liquid chromatography method for determination of guaraná (Paullinia cupana) flavan-3-ols. MethodsX 2019, 6, 850–855. [Google Scholar] [CrossRef]
- Yao, M.; Wang, B.; Li, Z.; Wu, S.; Zhao, B.; Sun, N.; Xiao, H.; Wang, J.; Liu, G.; Huang, T. Se-methylselenocysteine inhibits inflammatory response in an LPS-stimulated chicken HD11 macrophage-like cell model through the NFKB2 pathway. Front. Veter- Sci. 2025, 11, 1503436. [Google Scholar] [CrossRef]
- Kim, D.; Paggi, J.M.; Park, C.; Bennett, C.; Salzberg, S.L. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat. Biotechnol. 2019, 37, 907–915. [Google Scholar] [CrossRef]
- O’lEary, N.A.; Cox, E.; Holmes, J.B.; Anderson, W.R.; Falk, R.; Hem, V.; Tsuchiya, M.T.N.; Schuler, G.D.; Zhang, X.; Torcivia, J.; et al. Exploring and retrieving sequence and metadata for species across the tree of life with NCBI Datasets. Sci. Data 2024, 11, 732. [Google Scholar] [CrossRef]
- Putri, G.H.; Anders, S.; Pyl, P.T.; E Pimanda, J.; Zanini, F. Analysing high-throughput sequencing data in Python with HTSeq 2.0. Bioinformatics 2022, 38, 2943–2945. [Google Scholar] [CrossRef]
- Huang, T.; Xiao, H.; Tian, Q.; He, Z.; Yuan, C.; Lin, Z.; Gao, X.; Yao, M. Identification of upstream transcription factor binding sites in orthologous genes using mixed Student’s t-test statistics. PLOS Comput. Biol. 2022, 18, e1009773. [Google Scholar] [CrossRef]
- Huang, T.; Niu, S.; Zhang, F.; Wang, B.; Wang, J.; Liu, G.; Yao, M. Correlating gene expression levels with transcription factor binding sites facilitates identification of key transcription factors from transcriptome data. Front. Genet. 2024, 15, 1511456. [Google Scholar] [CrossRef]
- Yao, M.; He, H.; Wang, B.; Huang, X.; Zheng, S.; Wang, J.; Gao, X.; Huang, T. Testing the Significance of Ranked Gene Sets in Genome-wide Transcriptome Profiling Data Using Weighted Rank Correlation Statistics. Curr. Genom. 2024, 25, 202–211. [Google Scholar] [CrossRef]
- Gao, W.; Yu, T.; Li, G.; Shu, W.; Jin, Y.; Zhang, M.; Yu, X. Antioxidant Activity and Anti-Apoptotic Effect of the Small Molecule Procyanidin B1 in Early Mouse Embryonic Development Produced by Somatic Cell Nuclear Transfer. Molecules 2021, 26, 6150. [Google Scholar] [CrossRef]
- Krasteva, D.; Ivanov, Y.; Chengolova, Z.; Godjevargova, T. Antimicrobial Potential, Antioxidant Activity, and Phenolic Content of Grape Seed Extracts from Four Grape Varieties. Microorganisms 2023, 11, 395. [Google Scholar] [CrossRef]
- Duncan, C.J.A.; Hambleton, S. Human Disease Phenotypes Associated with Loss and Gain of Function Mutations in STAT2: Viral Susceptibility and Type I Interferonopathy. J. Clin. Immunol. 2021, 41, 1446–1456. [Google Scholar] [CrossRef]
- Wan, J.-J.; Yi, J.; Wang, F.-Y.; Zhang, C.; Dai, A.-G. Expression and regulation of HIF-1a in hypoxic pulmonary hypertension: Focus on pathological mechanism and Pharmacological Treatment. Int. J. Med Sci. 2024, 21, 45–60. [Google Scholar] [CrossRef]
- Cuarental, L.; Ribagorda, M.; Ceballos, M.I.; Pintor-Chocano, A.; Carriazo, S.M.; Dopazo, A.; Vazquez, E.; Suarez-Alvarez, B.; Cannata-Ortiz, P.; Sanz, A.B.; et al. The transcription factor Fosl1 preserves Klotho expression and protects from acute kidney injury. Kidney Int. 2022, 103, 686–701. [Google Scholar] [CrossRef]
- Zhang, S.; Li, P.; Wei, Z.; Cheng, Y.; Liu, J.; Yang, Y.; Wang, Y.; Mu, Z. Cyperus (Cyperus esculentus L.): A Review of Its Compositions, Medical Efficacy, Antibacterial Activity and Allelopathic Potentials. Plants 2022, 11, 1127. [Google Scholar] [CrossRef]
- Li, H.; Zhang, Y.; Hao, Y.; Xu, P.; Wang, X.; Zhu, B.; Lu, C.; Xu, K. Proanthocyanidins Inhibit Osteoblast Apoptosis via the PI3K/AKT/Bcl-xL Pathway in the Treatment of Steroid-Induced Osteonecrosis of the Femoral Head in Rats. Nutrients 2023, 15, 1936. [Google Scholar] [CrossRef]
- Qiao, X.; Wang, H.; He, Y.; Song, D.; Altawil, A.; Wang, Q.; Yin, Y. Grape Seed Proanthocyanidin Ameliorates LPS-induced Acute Lung Injury By Modulating M2a Macrophage Polarization Via the TREM2/PI3K/Akt Pathway. Inflammation 2023, 46, 2147–2164. [Google Scholar] [CrossRef]
- Au-Yeung, N.; Mandhana, R.; Horvath, C.M. Transcriptional regulation by STAT1 and STAT2 in the interferon JAK-STAT pathway. JAKSTAT 2013, 2, e23931. [Google Scholar] [CrossRef]
- Morris, R.; Kershaw, N.J.; Babon, J.J. The molecular details of cytokine signaling via the JAK/STAT pathway. Protein Sci. 2018, 27, 1984–2009. [Google Scholar] [CrossRef]
- Alazawi, W.; et al. Stat2 loss leads to cytokine-independent, cell-mediated lethality in LPS-induced sepsis. Proc Natl Acad Sci USA 2013, 110, 8656–8661. [Google Scholar] [CrossRef]
- Nan, J.; Wang, Y.; Yang, J.; Stark, G.R. IRF9 and unphosphorylated STAT2 cooperate with NF-κB to drive IL6 expression. Proc. Natl. Acad. Sci. 2018, 115, 3906–3911. [Google Scholar] [CrossRef]
- Kari, A.; M, Z.; Aili, Z.; Adili, A.; Hairula, N.; Abuduhaer, A. Knockdown of EPSTI1 alleviates lipopolysaccharide-induced inflammatory injury through regulation of NF-κB signaling in a cellular pneumonia model. Allergol. et Immunopathol. 2022, 50, 106–112. [Google Scholar] [CrossRef]
- Zhang, S.; Chu, C.; Wu, Z.; Liu, F.; Xie, J.; Yang, Y.; Qiu, H. IFIH1 Contributes to M1 Macrophage Polarization in ARDS. Front. Immunol. 2021, 11. [Google Scholar] [CrossRef]
- Tian, L.; Zhao, J.-L.; Kang, J.-Q.; Guo, S.-B.; Zhang, N.; Shang, L.; Zhang, Y.-L.; Zhang, J.; Jiang, X.; Lin, Y. Astragaloside IV Alleviates the Experimental DSS-Induced Colitis by Remodeling Macrophage Polarization Through STAT Signaling. Front. Immunol. 2021, 12, 740565. [Google Scholar] [CrossRef]
- Ungurianu, A.; Zanfirescu, A.; Margină, D. Sirtuins, resveratrol and the intertwining cellular pathways connecting them. Ageing Res. Rev. 2023, 88, 101936. [Google Scholar] [CrossRef]
- Lin, W.-R.; Liu, C.-J.; Fu, Y.-S.; Li, F.-A.; Huang, B. Comparison of the protein acetylome of endothelial cells upon shear flow and resveratrol treatment. Cardiol. J. 2020. [Google Scholar] [CrossRef]
- Du, L.-X.; Gao, X.-Y.; Ren, X.-Q.; Ding, Y.-Y.; Xu, A.; Wang, X.-Y.; Zhang, Y.-X.; Shu, S.; Yang, Y.-F.; Mi, W.-L.; et al. Baicalein ameliorates chronic itch in ACD mice by suppressing the spinal astrocytic STAT3–LCN2 cascade. Acta Pharmacol. Sin. 2024, 46, 366–379. [Google Scholar] [CrossRef]
- Liao, H.; Ye, J.; Gao, Y.; Lian, C.; Liu, L.; Xu, X.; Feng, Y.; Yang, Y.; Yang, Y.; Shen, Q.; et al. Baicalein self-microemulsion based on drug–phospholipid complex for the alleviation of cytokine storm. Bioeng. Transl. Med. 2022, 8, e10357. [Google Scholar] [CrossRef]
- Shi, Y.; Zhang, H.; Li, S.; Xin, D.; Li, S.; Yan, B.; Wang, S.; Liu, C. Procyanidin improves experimental colitis by regulating macrophage polarization. Biomed. Pharmacother. 2023, 165, 115076. [Google Scholar] [CrossRef]
- Yu, Q.; Wang, Y.; Dong, L.; He, Y.; Liu, R.; Yang, Q.; Cao, Y.; Wang, Y.; Jia, A.; Bi, Y.; et al. Regulations of Glycolytic Activities on Macrophages Functions in Tumor and Infectious Inflammation. Front. Cell. Infect. Microbiol. 2020, 10, 287. [Google Scholar] [CrossRef]
- Anand, R.J.; et al. Hypoxia causes an increase in phagocytosis by macrophages in a HIF-1alpha-dependent manner. J Leukoc Biol. 2007, 82, 1257–1265. [Google Scholar] [CrossRef]
- Li, C.; Wang, Y.; Li, Y.; Yu, Q.; Jin, X.; Wang, X.; Jia, A.; Hu, Y.; Han, L.; Wang, J.; et al. HIF1α-dependent glycolysis promotes macrophage functional activities in protecting against bacterial and fungal infection. Sci. Rep. 2018, 8, 1–11. [Google Scholar] [CrossRef]
- Mansoori, B.; Terp, M.G.; Mohammadi, A.; Pedersen, C.B.; Ditzel, H.J.; Baradaran, B.; Gjerstorff, M.F. Correction: Mansoori et al. HMGA2 Supports Cancer Hallmarks in Triple-Negative Breast Cancer. Cancers 2021, 13, 5197. Cancers 2024, 16. [Google Scholar] [CrossRef]
- Shi, L.; Shi, C.-w.; Cheng, K.-w. HMGA2 Synergizes with EZH2 to Mediate Epithelial Cell Inflammation and Apoptosis in Septic Lung Dysfunction. Ann Clin Lab Sci 2022, 52, 938–946. [Google Scholar]
- Tang, L.; Zhu, M.; Che, X.; Yang, X.; Xu, Y.; Ma, Q.; Zhang, M.; Ni, Z.; Shao, X.; Mou, S. Astragaloside IV Targets Macrophages to Alleviate Renal Ischemia-Reperfusion Injury via the Crosstalk between Hif-1α and NF-κB (p65)/Smad7 Pathways. J. Pers. Med. 2022, 13, 59. [Google Scholar] [CrossRef]
- Li, J.; Dan, W.; Zhang, C.; Liu, N.; Wang, Y.; Liu, J.; Zhang, S. Exploration of Berberine Against Ulcerative Colitis via TLR4/NF-κB/HIF-1α Pathway by Bioinformatics and Experimental Validation. Drug Des. Dev. Ther. 2024, 18, 2847–2868. [Google Scholar] [CrossRef]
- Liu, B.; Peng, Y.; Wang, C.; Wei, H.; Xu, S.; Liu, Y.; Yin, X.; Bi, H.; Guo, D. Baicalin prevents experimental autoimmune uveitis by promoting macrophage polarization balance through inhibiting the HIF-1α signaling pathway. Sci. Rep. 2025, 15, 1–13. [Google Scholar] [CrossRef]
- Wang, C.; Ma, C.; Gong, L.; Guo, Y.; Fu, K.; Zhang, Y.; Zhou, H.; Li, Y. Macrophage Polarization and Its Role in Liver Disease. Front. Immunol. 2021, 12, 803037. [Google Scholar] [CrossRef]







Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2025 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).