3. Results
This study assessed 357 CC mice originating from 15 genetically different CC lines. The mice were divided into four dietary challenge groups. The total number of females and males were 168 and 189, respectively, with an average of 10 mice per line in each group. Briefly, the 357 mice were maintained for 12 weeks under two different dietary challenges of HFD Vs CHD. The four groups (female HFD, CHD, and male HFD, CHD) undergo IPGTT at two different time points at weeks 6 and 12 and are presented as areas under the curve (AUC) to assess the effect of diet on glucose clearance and diabetes development. Furthermore, the body weight of the mice was bi-weekly evaluated to define the impact of diet on body weight and obesity development. At the endpoint of the experiment, small and large intestines were extracted for polyp count.
Table 1.
A. Heritability values for all tested traits (%ΔBW6-12, total AUC6-12, whole intestinal polyp number, small intestine polyp number, colon polyp number and alveolar bone volume for both diets. Heritability was calculated from the ANOVA results using the formula . The values range between (-1,1). B. Heritability values for all tested traits (%ΔBW6-12, total AUC6-12, whole intestinal polyp number, small intestine polyp number, colon polyp number and alveolar bone volume for both diets and sexes separately. Heritability was calculated by the ANOVA results using the formula . The values range between (-1,1).
Table 1.
A. Heritability values for all tested traits (%ΔBW6-12, total AUC6-12, whole intestinal polyp number, small intestine polyp number, colon polyp number and alveolar bone volume for both diets. Heritability was calculated from the ANOVA results using the formula . The values range between (-1,1). B. Heritability values for all tested traits (%ΔBW6-12, total AUC6-12, whole intestinal polyp number, small intestine polyp number, colon polyp number and alveolar bone volume for both diets and sexes separately. Heritability was calculated by the ANOVA results using the formula . The values range between (-1,1).
3.1. Assessments of Glucose Clearance in CC cohort as a Response to Diet at Different Time Points
After weeks 6 and 12 of the experiment, an IPGTT) for 180 min of the different CC lines under HFD and CHD was performed to assess the diabetogenic response. These results were converted into the total AUC of the different CC lines under HFD and CHD. The results in Figures 1A and 1B show the effect of HFD and CHD on glucose clearance in different CC lines at weeks 6 and 12, respectively, regardless of sex. Overall, results displayed an elevation in total AUC on HFD compared with CHD with P values < 0.01, as shown in Figure 1. In week 6, five different CC lines, including IL557, IL2513, IL4141, IL5000, and IL6012, displayed a significant increase in AUC under HFD compared to CHD. These differences between the CC lines indicate the importance of the host's genetic background in determining the response to the same stimulant.
3.2. Glucose Tolerance Assessments in Response to Diet and Sex at Different Time Points
Our results have shown variation between the different CC lines and among both sexes as a response to HFD and CHD. As shown in Figure 2A, at week 6, the total AUC in the overall female and male populations was significantly higher in response to HFD (40054.48± 3425.76(mg/dL*min), 52995.45±3281.15 (mg/dL*min), respectively). On the other hand, the male population showed slower glucose clearance, with total AUC values higher than in the female population. This result supports the evidence that males are more susceptible to developing T2D than females. Moreover, females of five different CC lines (IL557, IL4141, IL5000, IL6009, and IL6012) showed a significant increase in total AUC values in response to HFD with P values < 0.05. In contrast, CC lines (IL3912, IL72, IL111, and IL711) showed an opposite effect. Regarding the male population, five different CC lines (IL 557, IL2513, IL4141, IL5000, IL6012) showed significant elevation in total AUC values with P value <0.05 due to HFD intake. However, in the male population, the total AUC of the same CC lines decreased in total AUC under HFD maintenance Vs. CHD maintenance 52565.62(mg/dL*min) Vs. 54118.12(mg/dL*min), respectively. Interestingly, after another six weeks under HFD, some of the CC lines of both populations behaved differently, as shown in Figure 2B. The total AUC at week 12 in the female population of lines IL2513, IL6009, and IL6018 decreased due to HFD and increased under CHD compared with the total AUC at week 6. In addition, more CC lines showed an increase in total AUC at week 12, like IL111, in both populations. These variations in glucose clearance under the same environmental factors support the effect of genetic factors as well as sex effect on T2D development.
Figure 2.
A. Total AUC (min*mg\dl) of fifteen different CC lines following six weeks of dietary challenge HFD Vs. CHD in male and female populations. The X-axis represents the different CC lines, and the Y-axis represents the AUC values. Data was analyzed by One-way Analysis of Variation (ANOVA) P < 0.05. B. Total AUC (min*mg\dl) of fifteen different CC lines following four months of dietary challenge HFD Vs. CHD in male and female populations. The X-axis represents the different CC lines, and the Y- Y-axis represents the AUC values. Data was analyzed by One-way Analysis of Variation (ANOVA) P < 0.05.
Figure 2.
A. Total AUC (min*mg\dl) of fifteen different CC lines following six weeks of dietary challenge HFD Vs. CHD in male and female populations. The X-axis represents the different CC lines, and the Y-axis represents the AUC values. Data was analyzed by One-way Analysis of Variation (ANOVA) P < 0.05. B. Total AUC (min*mg\dl) of fifteen different CC lines following four months of dietary challenge HFD Vs. CHD in male and female populations. The X-axis represents the different CC lines, and the Y- Y-axis represents the AUC values. Data was analyzed by One-way Analysis of Variation (ANOVA) P < 0.05.
3.3. Effect of HFD on the Body Weight Changes at Two Different Time Points
The %ΔBW reflects the percentage of body weight change due to CHD and HFD consumption at two different experimental time points of 15 different CC lines, as presented in Figures 3A and 3B respectively. The entire population has shown a significant increase in %ΔBW on HFD compared with CHD at both experimental time points. Additionally, individual CC lines displayed different responses to HFD. On the one hand, CC lines IL557, IL1912, IL4141, IL5000, and IL6012 increased significantly in %ΔBW on HFD in both weeks compared with CHD. On the other hand, IL111 revealed the opposite response. The %ΔBW decreased significantly on HFD at week 12 compared with CHD (19.26 Vs. 34.62, respectively). The main reason for this variation and dissimilarity between the CC lines is the genetic background of each CC line.
Figure 3.
A. Percentage body weight changes (%ΔBW ) following six weeks of diet challenge ( CHD Vs. HFD) for the entire population of fifteen different CC lines (The X-axis). The Y-axis represents %ΔBW calculated as BW6(g) -BW0 (g)/BW0*100. B. Percentage body weight changes (%ΔBW ) following 12 weeks of diet challenge ( CHD Vs. HFD) for the entire population of fifteen different CC lines (The X-axis). The Y-axis represents %ΔBW calculated as BW12(g) -BW0 (g)/BW0*100.
Figure 3.
A. Percentage body weight changes (%ΔBW ) following six weeks of diet challenge ( CHD Vs. HFD) for the entire population of fifteen different CC lines (The X-axis). The Y-axis represents %ΔBW calculated as BW6(g) -BW0 (g)/BW0*100. B. Percentage body weight changes (%ΔBW ) following 12 weeks of diet challenge ( CHD Vs. HFD) for the entire population of fifteen different CC lines (The X-axis). The Y-axis represents %ΔBW calculated as BW12(g) -BW0 (g)/BW0*100.
3.4. Effect of HFD and Sex on the Body Weight Changes at Two Different Time Points
The results showed an effect of HFD on body weight changes
, variability in response between the different CC lines, and differences among both populations. As presented in
Figure 4A, both populations maintained for six weeks under HFD showed elevation in body weight changes compared with CHD, while the male population showed more susceptibility to HFD compared with the female population, with an average of 25.81% and 22.88%, respectively. However, some CC lines behaved differently on HFD consumption, and the body weight change decreased significantly, like the CC line IL6009, with an average of 16.15% on CHD and 3.56% on HFD. Regarding the male population, the dissimilarity between the CC lines was also observed significantly. Some lines showed a decrease in body weight change, such as line IL6018, with an average of 22.12% on CHD, 11.69% on HFD, IL111 30.67% on CHD, and Vs.11.76% on HFD. After 12 weeks, the CC mice respond strongly to HFD intake. As shown in
Figure 4B, the %ΔBW12 of both populations increased significantly to 33.24% in females and 35.85% in males due to HFD. Furthermore, the maintenance of the mice on HFD for an additional six weeks led to new results and variations between the different CC lines. For example, four CC lines in the male population, IL72, IL111, IL2513, and IL6018, decreased significantly under HFD compared with CHD with a P value < 0.05, as presented in
Supplementary Table S2. In the female population, the %ΔBW of IL 5012 increased significantly on HFD at week 12 than its value at week 6 (27.59% and 18.88%, respectively).
3.5. Intestinal Polyp Development due to HFD Consumption in Different CC Lines
At the end of 12 weeks of the experimental period, the small intestine and colon were extracted and washed, and the small intestine was divided into three segments, while the large intestine was kept uncut. The intestines were stained with methylene blue at 0.02%, and polyp was counted. The sum of polyps in the small intestine and the large intestine displays the total polyps count in the whole intestine. The entire population revealed higher polys when maintained on HFD compared with CHD. As presented in Figure 5A, six different CC lines showed elevation in total intestinal polyp count, and three CC lines presented a significant increase in polyp number, IL2513, IL5012, and IL6012, with a P value < 0.05. Moreover, other CC lines, IL1912 and IL4141, increased in polyp due to CHD consumption. Our results have shown variation between the different CC lines due to different diets.
Figure 5.
A. The whole intestinal polyps count in the entire population of 15 different CC lines after being maintained for 12 weeks on HFD Vs. CHD. The X-axis represents the different CC lines, and Y- the axis represents the polyp number development. Total intestinal polyps = Total small intestine polyp+ colon polyps’ number. Data was analyzed by One-way Analysis of Variation (ANOVA). B. Intestinal polyps count of both populations (female and male) of 15 different CC lines after being maintained for four months on HFD Vs. CHD. The X-axis represents the different CC lines, and the Y-axis represents the polyp number development. Total intestinal polyps = Total small intestine polyp+ colon polyps’ number. Data was analyzed using a one-way analysis of variation (ANOVA).
Figure 5.
A. The whole intestinal polyps count in the entire population of 15 different CC lines after being maintained for 12 weeks on HFD Vs. CHD. The X-axis represents the different CC lines, and Y- the axis represents the polyp number development. Total intestinal polyps = Total small intestine polyp+ colon polyps’ number. Data was analyzed by One-way Analysis of Variation (ANOVA). B. Intestinal polyps count of both populations (female and male) of 15 different CC lines after being maintained for four months on HFD Vs. CHD. The X-axis represents the different CC lines, and the Y-axis represents the polyp number development. Total intestinal polyps = Total small intestine polyp+ colon polyps’ number. Data was analyzed using a one-way analysis of variation (ANOVA).
3.6. Intestinal Polyp Development Under the Influence of Diet and Sex in Different CC Lines
Our results showed a variation in both sexes from different CC lines and in polyp development due to diet intake. Moreover, results shown in
Figure 5B present an elevation in polyp count in the female population under HFD maintenance compared with CHD. However, the male population developed more polyps than females under the same diet. Additionally, we noticed the variation between the different CC lines of the same population. Within the female population, three CC lines, IL2513, IL5012, and IL6012, respond significantly to HFD and increase the polyp number with P values < 0.05 compared with CHD. The results in
Supplementary Table S3 present the female lines IL1912 (P<0.05) and IL 6009, revealing an increase in polyp number due to CHD. The same pattern showed in the male population, where two different CC lines IL72, and IL6012, increased in polyp number due to HFD consumption, while IL1912 and IL4141 showed more polyps number on CHD than on HFD. The dissimilarity between the CC lines and among the sexes supports our idea that genetic elements influence the presence and development of CRC.
3.7. Small Intestinal Polyp Development under the Influence of Diet in Different CC Lines
As presented in Figure 6A, the consumption of HFD in the entire population increased polyp number significantly with P value < 0.01. The different CC lines behaved differently in response to HFD. In addition, some CC lines weren’t affected by diet challenges such as IL557. The fact that Individual CC lines respond differently to diet under the same environmental factors confirms the importance of studying the susceptible genetic factors.
Figure 6.
A. The small intestine Polyps number among the entire population of 15 different CC lines was maintained for 12 weeks on HFD Vs. CHD. The X-axis represents the different CC lines, and the Y-axis represents the polyp number development. Data was analyzed using a one-way analysis of variation (ANOVA).
Figure 6.
A. The small intestine Polyps number among the entire population of 15 different CC lines was maintained for 12 weeks on HFD Vs. CHD. The X-axis represents the different CC lines, and the Y-axis represents the polyp number development. Data was analyzed using a one-way analysis of variation (ANOVA).
3.8. Small Intestinal Polyp Development Under The Influence Of Diet And Sex In Different CC lines
Figure 6B shows the polyp number in the small intestine of the different CC lines in both populations. Surprisingly, the polyp number under CHD was significantly higher in males than under HFD, with a P value < 0.05. On the contrary, the female population displayed a significant polyp number in response to HFD, with a mean of 4.34±0.21 (P<0.05). Moreover, the variation in response to HFD between different CC lines in the male population was revealed by three CC lines. IL72 and IL 5012 in the male population showed significant elevation of polyp number on HFD (5.33±0.66, 6.33±0.88 respectively) compared with CHD (1.33±0.33, 2.25±0.25 respectively). The variety of results between the different CC lines proves the genetic makeup of intestinal cancer development.
3.9. Colon polyp Development Under The Influence Of Diet In The Overall Population, Regardless Of Sex
Our results in Figure 7A indicate an increase in polyp counts in the overall population as a response to HFD compared with CHD (2.13Vs.1.99, respectively). However, when we compared the effect of diet between the different CC lines, we found variation and dissimilarity in response to diet. As shown in Supplementary Table 4, CC lines, including IL72, IL2513, IL5000, and IL 6012, developed significantly more polyps under HFD when compared with CHD (P< 0.05). While CC lines IL1912 and IL4141 significantly increased the polyp number under CHD compared with HFD (P< 0.05). Since the environmental factors are constant, we observe a difference in response between different CC lines. These results confirm and support the role of genetic background in disease development.
3.10. Colon polyp Development Under The Influence Of Diet And Sex In Different CC lines
The results showed variation in response to diet between the different CC lines within the same population. As presented in Figure 7B, males of the three CC lines IL72, IL5000, and IL6012 had significantly increased polyp counts in the colon on HFD maintenance with a P value <0.05. On the contrary, in the male population, the polyp number of IL4141 as well as IL1912 on CHD were highly significant than on HFD (3.25±0.41,1±0.00 respectively, and 3.30±0.42, 1.71±0.184 respectively) with P value < 0.01. Regarding the female population, IL5000 significantly developed more polyps under HFD than CHD (1.94±0.25,0.67±0.23, respectively). IL1912 in the female population developed significantly more polyps on CHD than on HFD (3.10±0.48,0.71±0.28 respectively) with P value <0.01. The fact that the whole experiment took place under the same environmental condition and still got the differences in response indicates that the reason for the variation is the genetic background of each CC line.
Figure 7.
Total colon polyps number in 15 different CC lines for both population females and males maintained for four months under dietary challenge HFD (42%) Vs. CHD (18%). The X-axis presents the different CC lines and the mean of the entire population; the Y-axis presents the number of polyps in the colon for both females and males. Data was analyzed using a one-way analysis of variation (ANOVA).
Figure 7.
Total colon polyps number in 15 different CC lines for both population females and males maintained for four months under dietary challenge HFD (42%) Vs. CHD (18%). The X-axis presents the different CC lines and the mean of the entire population; the Y-axis presents the number of polyps in the colon for both females and males. Data was analyzed using a one-way analysis of variation (ANOVA).
3.11. Assessment of Cytokines Profile of the CC Lines Under Dietary Challenge
The results of the cytokines profile were obtained after the analysis of the blood serum of five different CC lines at two different time points (at weeks 6 and week 12). As presented in Figure 8 and Supplementary Figures 2-6, the five different CC lines showed different cytokines profiles as a result of dietary challenges at weeks 6 and 12, as well as in both populations. At week 6, the RANKL cytokine in the male population of all CC lines increased significantly under HFD compared with CHD. Moreover, cytokine IL-6 significantly increased CC lines IL72, IL557 and IL711. Interestingly, CC lines IL6012 and IL6018 revealed different levels of the cytokine TNF-α as a response to HFD consumption. In contrast, the level of TNF-α increased significantly in IL6018, contrary to IL6012, which decreased substantially under HFD intake. Additionally, the CC lines showed different results over time. Under HFD, the IL-6 cytokine of CC line IL711 at week 12 decreased significantly compared with CHD. In the female population, different cytokine profiles showed different expression levels. In line IL557 maintained on HFD showed more changes in cytokine concentration over time compared with their counterparts maintained on CHD. Furthermore, this CC line displayed a significant increase in the level of IL1-β and IL-4 and a significant decline in both RANKL and IL-17A cytokine concentration due to HFD maintenance for six weeks. In contrast, CC line IL6012 revealed a substantial elevation of IL-17A, RANKL, and TNF-α due to HFD intake. Some CC lines showed a curve inversion after 12 weeks of the dietary challenge. In CC line 557 at week 6, a significant decrease in IL-6 and RANKL on HFD was observed. The different cytokine levels between the different CC lines confirm the importance of genetics in the development of various complex diseases that have been studied in the current research.
Figure 8.
Cytokines profiles for ten different proinflammatory cytokines in male and female mice of 5 different CC lines at week six during the dietary challenge of either HFD (42%) or CHD (18%). The X-axis presents the different proinflammatory cytokines, and the Y-axis presents cytokines levels in blood serum for both female and male mice. Data was analyzed by One-way Analysis of Variation (ANOVA).
Figure 8.
Cytokines profiles for ten different proinflammatory cytokines in male and female mice of 5 different CC lines at week six during the dietary challenge of either HFD (42%) or CHD (18%). The X-axis presents the different proinflammatory cytokines, and the Y-axis presents cytokines levels in blood serum for both female and male mice. Data was analyzed by One-way Analysis of Variation (ANOVA).
3.12. Correlation Analysis Between The Studied Phenotypes
To clarify and better understand the correlation and the coexistence of multiple disease conditions in an individual, we aimed to study the effect of host genetic background on disease multimorbidity. We focused on the development of colorectal cancer, T2D development, and obesity caused by HFD consumption. The coefficient values can range from +1 to -1, where +1 indicates a strong positive correlation, -1 indicates an entirely negative relation and 0 value indicates no existence of correlation. The color in the heatmap shows the level of the values of measured traits in each Figure. The red color shows the highest values, the light blue color shows the lowest values, and other colors between these two extremes show intermediate values.
The heatmap in Supplementary Figure 7A represents the correlations between the tested phenotypes (Total AUC 6,12, %ΔBW6,12, Total small intestine polyps, Total colon polyp count) in each experimental group (Female CHD vs. female HFD and Male CHD Vs vs. male HFD) of overall population for 15 different CC lines. According to the correlation matrix for the overall female population, there is a strong positive correlation between total AUC 6 and total AUC 12 under HFD with coefficient value (0.79), the same pattern seen between the body weight changes at week 6 and body weight changes at week 12 (%ΔBW). Moreover, the relation between the total small intestine polyp number ranged from negative correlation to positive correlation. Interestingly, our results showed a stronger correlation between the traits as CC lines were analyzed individually. For example, Supplementary Figure 7B showed a strong effect of HFD on multimorbidity and disease development. Under HFD, the total intestinal and colon polyps correlated significantly and strongly with total AUC 6 and %ΔBW6. Moreover, this relation converted from a negative on CHD to a positive relation on HFD. The female population under HFD showed a stronger correlation than the male population under the same diet. In contrast, IL 5012 Supplementary Figure 7C. The significant variation in the correlation between the different traits and the different CC lines demonstrates the effect of genetic factors on diseases' multi-morbidities.
In the sixth week of the experiment, we analyzed the mice’s serum to determine the effect of diet on the concentration of inflammatory cytokines and its relationship with the total AUC 6 and %BW 6. For example, the maintenance of HFD strengthens the relationship between the different cytokines in the female population. As presented in
Figure 9 and
Supplementary Figure 8. The correlation matrix of the female population showed conversion from weak relation to strong positive correlation after 6 weeks under HFD compared with CHD. All over the project, we focused on the response of each CC line separately due to HFD intake. Supplementary Figure 8 presented the correlation matrix between the cytokine level and phenotypes (total AUC 6 and % BW) of each CC line individually for both male and female populations under dietary challenge. The male population of CC lines IL557 and IL711 on HFD revealed a positive, strong correlation between total AUC 6, IL-6 (0.56, 0.5 respectively), and IL-10 (0.7,0.77 respectively),
The correlation between different phenotypes and the inflammatory cytokines were presented in Supplementary Figure 9 of both populations and different CC lines. Comparing both populations, the female population showed a strong positive correlation between the %ΔBW and total AUC 12. The male population revealed the effect of diet on disease development by changing the heatmap from a negative correlation under CHD to a positive correlation under HFD, as described in Supplementary Figure 9.
3.13. Heritability
The heritability was calculated from the results of One Way ANOVA for different tested traits that were calculated by diet only as well as by sex and diet.
Table 1A shows the different diet traits calculated separately for diet (CHD, HFD). The heritability in total AUC displayed an estimated value larger than 0.45 under both diets. Additionally, the % ΔBWT of both weeks showed estimated values of more than 0.17 under both diets. However, the highest value shown in week 6 under HFD was 0.41. The whole intestinal polyp and colon polyp numbers revealed higher estimated values under CHD (0.311,0.349,0.174, respectively) compared with values under HFD (0.082, 0.042, 0.097, respectively). Furthermore, the BV showed relatively the lowest estimated values and consequently leaned toward 0 in both diets.
Table 1B presents the different phenotypes calculated by sex and diet separately. The female population displayed higher values of more than 0.56 of total AUC under both diets. Similarly, in the male population, the total AUC of both tested weeks 6 and 12 during the experimental procedure revealed higher values of more than 0.511 under both diets. Additionally, both sexes maintained under HFD showed higher values of %ΔBWT6-12 up to 0.33 compared with a maximum value of 0.33 under CHD. Moreover, the small intestine polyp number in the female population maintained on HFD showed higher heritability values compared with females under CHD (0.225, 0.059, respectively). In contrast, the male population's polyps in the small intestine displayed lower heritability values under HFD compared with CHD (0.069, 0.249, respectively). On the other hand, our calculated results revealed higher estimated values in colon polyp numbers in both populations under CHD compared with HFD.