4.3. Free Carbohydrate Quantification
The samples underwent centrifugation (using Velocity14 centrifuge, Metrix, México) at 4025 ×g for 5 min. The resulting supernatant was collected and filtered (Millex® 0.2 μm nylon filters, Millipore Corporation, USA). High-resolution liquid chromatography (HPLC) was used to quantify free carbohydrates according to the manufacturer’s application notes (Ball et al., 2011). The chromatographic equipment consisted of a quaternary pump 1200 Infinity System (Agilent, USA) and a refractive index detector (RID, 1260, Agilent, USA). For the detection of nystose, ketose, saccharose, glucose, and fructose, a Hamilton Ca column (7.8 x 305 mm, 8 79436, USA) was used. The mobile phase was water at a flow rate of 0.4 mL/min, with an injection volume of 10 μL, column temperature of 85 °C, and detector temperature of 55 °C. To detect glucuronic acid, galacturonic acid, mannose, galactose, xylose, and rhamnose, an Agilent Hi-Plex column H (7.7x300 mm, 8 μm, PL1170 - 6830, US) was used. The mobile phase was H2SO4 (0.01 M) at a flow rate of 0.4 mL/min, an injection volume of 10 μL, and the column and detector temperature were 55 °C. Carbohydrates were identified and quantified using a standard curve prepared in advance with each of the selected carbohydrates (Supplementary Material 1) (Ball et al., 2011).
4.4. Bioactive Compounds Analysis of AS, PPJ and the Beverage
For determination of bioactive compounds, of AS, PPJ and the beverage the samples were centrifuged at 4025 ×g (centrifuge Velocity14, Metrix, México) for 5 min, and the supernatant was collected and filtered (Millex®, 0.2 μm nylon filters, Millipore Corporation, USA).
4.4.1. Total Phenolic Compounds and Flavonoids
The total phenolic compounds (TPC) were measured using the Folin–Ciocalteau method, while the flavonoid content was assessed using the aluminum chloride colorimetric assay (Kurdyukov et al., 2021). All spectrophotometric analyses were carried out using a microplate reader Multiskan Go (Thermo, USA). To quantify TPC, a standard curve was created with gallic acid, with five calibration points ranging from 0.02 to 0.14 mg gallic acid/mL. The formula used for the curve was y = 11.824x – 0.0296, with an R² value of 0.99. The results were reported as mg gallic acid equivalents/mL (AGE/mL) (Ruiz Canizales et al., 2019). The flavonoids quantification was made using a standard curve prepared with quercetin with five calibration points of 0, 50, 100, 150, 200, 250, and 300 µg of quercetin/mL (y = 0.0045x + 00.085; R² = 0.99). The results were reported as µg of quercetin equivalents/mL (QE/mL) (Villamarín-Gallegos et al., 2020).
4.4.2. Individual Bioactive Compounds Identification and Quantification
Bioactive compounds were identified and quantified by high-performance liquid chromatography (HPLC). The chromatographic system utilized a quaternary pump (1200 Infinity System, Agilent, USA) along with a diode-array detector (DAD, 1260, Agilent, USA) and a ZORBAX Eclipse Plus C18 column (4.6x250 mm, 5 μm, 959990 - 902, US). The column and detector were both set to a working temperature of 35°C. The mobile phase consisted of phosphoric acid 0.5% (A) and methanol (B) in a 40:60 ratio, with an isocratic flow rate of 1 mL/min (Mothibedi, 2013). Quantification of the bioactive compounds (rutin, gallic acid, catechin, caffeic acid, quercetin, p-coumaric acid, pelargonidin, ferulic acid, protocatechuic acid, ascorbic acid, myricetin, and chlorogenic acid) was accomplished using standard curves that had been previously prepared with each of the selected analytical standards (Supplementary Material 1).
4.6. In Vitro Gut Fermentation
Undigestible residue obtention: In the simulation of intestinal fermentation, foods must be digested to ensure that the microbiota use the materials that would reach the colon, rather than the free carbohydrates in the raw material. The AS, PPJ, and the combined beverage were obtained according to the standardized protocol developed by the INFOGEST research network (Brodkorb et al., 2019). The protocol consists of simulating the digestive process by adding salts and enzymes characteristic of oral, gastrointestinal, and duodenal digestion. In the simulation of gut fermentation, foods must undergo digestion to ensure that the microbiota is using the materials that would reach the colon and not the free carbohydrates in the raw material. The AS, PPJ, and the combined beverage was obtained following the standardized protocol developed by the INFOGEST research network (Brodkorb et al., 2019). The protocol consists of simulating the digestive process through the addition of salts and enzymes characteristic of the oral, gastric, and duodenal digestion (KCl, NaHCO3, MgCl2 (H20)6, CaCl2 2(H2O), NaCl, NaOH [Merck, Darmstadt, He, Germany]; KH2PO4, HCl [J.T.Baker, Radnor, PA, USA]; human salivary α-amylase, porcine pepsin, and porcine pancreatin [Sigma-Aldrich, St. Louis, MO, USA]; bovine bile [BioBasic, Markham, ON, Canada]), at 37°C during orbital agitation at 100 rpm in an incubator shaker (Barnstead Lab-line, Model SHKA4000, Dubuque, IA, USA).
The chyle obtained from all simulated digestions was placed in a beaker with dialysis tubes with a nominal pore size cutoff of 12,000 Da (Sigma-Aldrich) filled with 1M NaHCO3 to filter out the low molecular weight molecules that could be absorbed during the digestion process. The lyophilized residue on the beakers after dialysis is considered the non-digestible residue. The in vitro gut fermentation set-up, preparation of the medium, inoculum, and sample, treatment followed the method of Goñi & Martín-Carrón (1998).
Fermentation medium: 2.5 g/L tryptone, 125 µl/L micro-mineral solution, 250 mL/ macro-mineral solution, 250 mL/L reducing solution, and 1.25 mL/L of a 1 g/L resazurin solution prepared in distilled water were added in strict order. The micromineral solution contained 132 g/L CaCl2 2(H2O), 100 g/L MnCl2 4(H2O), 10 g/L CoCl2 6(H2O), and 80 g/L FeCl3 6(H2O) (Sigma-Aldrich). The micro-mineral solution was prepared in a 4 g/L (NH4)HCO3 buffer solution and 35 g/L NaHCO3 (Sigma-Aldrich). The macro-mineral solution contained 5.7 g/L Na2HPO4, 6.2 g/L KH2PO4, and 0.6 g/L MgSO4 7(H2O) in distilled water. The reducing solution was prepared immediately before use and consisted of 6.25 g/L anhydrous L-cysteine, 6.25 g/L Na2S 9(H2O), and 40 mL/L of 1M NaOH (Sigma-Aldrich). The resazurin solution is a pH indicator, so the final fermentation medium is blue.
The fermentation medium was placed in serum-type reaction vials (Supleco, Bellefonte, PA, USA) with a rubber septum. Each vial had two outlets to which three-way valves were attached to bubble CO2 through one and add the fermentation medium through the other. First, 8.33 mL of reducing solution was added to each se-rum vial and placed in a water bath at 100°C for 15 minutes with the valves open. CO2 was then bubbled into the fermentation medium through one of the valves until the medium turned pink (reduced).
Bacterial inoculum: The human gut bacteria were obtained from the feces of six adult volunteers (25-30 years old). The volunteers were well defined as “apparently healthy” by a physician and a nutritionist. The volunteers were of average weight (Body Mass Index between 18.5-22.9), were not currently receiving any pharmacological or nutritional treatment, had not changed bowel habits, and had not taken any antibiotics in the month preceding the fecal donation.
Donors collected their feces and transferred it to CO2-filled bags to avoid contamination with another type of body fluid (blood or urine). The feces were exposed to CO2 immediately upon arrival at the laboratory, and equal proportions of feces from each donor were mixed and homogenized according to the recommendation for pooled feces (Aguirre et al., 2014). The pooled feces were homogenized with the sterilized fermentation medium at a ratio of 10% (fw/v) for 3 min. The mixture was then filtered (1 mm mesh) before immediate use. The filtrate was considered as bacterial inoculum.
Fermentation: 100 mg (dw) of AS, PPJ, and the beverage (substrates) were placed in serum vials (50 mL capacity, Supleco) with 8 mL of fermentation medium and 2 mL of inoculum. Vials were sealed, CO2 was bubbled, and the valves were closed and placed in a 37°C shaking bath at 100 rpm (Dual Action Shaker and Water bath, PolyScience, Niles, IL, USA).
4.6.1. Quantification of Fermentation by-Products
AS, PPJ, and beverage fermentation kinetics were monitored at 0, 2, 4, 8, 12, and 24 h. Lactulose was used as a positive control and vials of fermentation medium and inoculum without substrate were used as negative controls.
Gas production: Syringes of different volumes (1, 3, and 10 mL) were fitted to the three-way valve; the valve was opened slowly, and the displacement of the plunger was recorded.
pH variations: The rubber septum was removed, the fermented contents were transferred to centrifuge tubes, and the pH of the fermentation medium was measured (HI 2210 pH Meter, Hanna Instruments, Carrollton, TX, USA). To determine the rate of fermentation according to the decrease in pH, the pH values at different fermentation times were fitted to a linear regression model (pH/time) with the data of the first 8 hours.
Sample preparation: After measuring pH, the fermentation was stopped by adding 2.5 mL of 1M NaOH to the centrifuge tubes with the fermented substrates of AS, PPJ, and the beverage. Samples were centrifuged at 2500×g (Z 36 HK centrifuge, rotor 220.78 V21, Hermle Labortechnik, Wehingen, BW, Germany) for 10 min at 4°C and filtered through 0.45 μm cellulose filters (Thermo Fisher Scientific, Waltham, MA, USA) to obtain at least 3 mL of supernatant. In microcentrifuge tubes, 400 μL of filtered supernatant were mixed with 100 μL of internal standard (50 μmol/mL 2-methylvaleric acid solution [Sigma-Aldrich]), 10 μL of formic acid (Sigma-Aldrich), and 490 μL of Milli-Q water, and were centrifuged again at 12000×g for 15 min at 4°C (rotor 221.28 V21, Z 36 HK centrifuge). After the centrifugation, 700 μL of the supernatant was taken into chromatograph vials (Perkin-Elmer, Waltham, MA, USA).
SCFA quantification was performed following the methodology of Saura-Calixto et al. (2000 with a gas chromatograph Clarus 500/580 (Perkin-Elmer) equipped with a capillary column CARBOWAX (30 m, capillary 25.0 µm x 0.32 mm) and a flame ionization detector. The detector temperature started at 95°C and was maintained for 2 min, then increased to 180°C at a rate of 20°C/min. Helium was the mobile phase at a flow rate of 1 mL/min as the initial temperature of 95°C was maintained for 2 min, then raised at 10 °C/min up to 250 °C. The quantification was made by interpolating standard curves previously prepared with each of the selected standards with five calibration points of 1.00, 2.50, 5.00, 10.0, and 20.0 µmol/mL (Supplementary Material 1).