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Submitted:
19 February 2024
Posted:
19 February 2024
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Trait | Env. | Mean* | Std. Dev. | Min. | Max. | CV % | h2 |
---|---|---|---|---|---|---|---|
GPC (%) | Sofia 2014 | 13.2b | 1.46 | 7.6 | 16.8 | 11.09 | 0.64 |
Sofia 2017 | 12.9b | 2.06 | 6.0 | 16.8 | 15.90 | 0.78 | |
Sofia 2021 | 14.2a | 1.62 | 7.1 | 19.4 | 11.43 | 0.69 | |
Average | 13.4 | 1.34 | 9.4 | 16.8 | 10.00 | 0.82 | |
BLUE | 13.4 | 0.51 | 11.6 | 14.7 | 3.81 | ||
TKW (g) | Sofia 2014 | 43.1b | 6.43 | 22.2 | 65.8 | 14.92 | 0.77 |
Sofia 2017 | 44.0b | 4.72 | 31.0 | 58.2 | 10.73 | 0.64 | |
Sofia 2021 | 48.6a | 5.42 | 24.4 | 61.6 | 11.14 | 0.70 | |
Average | 45.2 | 4.28 | 33.7 | 55.0 | 9.46 | 0.81 | |
BLUE | 45.4 | 2.25 | 39.6 | 51.8 | 4.94 |
(a) | ||||||
---|---|---|---|---|---|---|
Source of Variation | SS | df | MS | F | P-value | F crit |
Genotype (G) | 962.685 | 178 | 5.408 | 3.010 | 0.0000 | 1.233 |
Environment (E) | 145.483 | 2 | 72.741 | 40.485 | 0.0000 | 3.021 |
G × E | 639.638 | 356 | 1.797 | 7.210 | 0.0000 | 3.320 |
Total | 1747.805 | 536 | ||||
(b) | ||||||
Source of Variation | SS | df | MS | F | P-value | F crit |
Genotype (G) | 9792.257 | 178 | 55.013 | 2.897 | 0.0000 | 1.233 |
Environment (E) | 3128.650 | 2 | 1564.325 | 82.375 | 0.0000 | 3.021 |
G × E | 6760.582 | 356 | 18.990 | 4.3643 | 0.0000 | 4.092 |
Total | 19681.49 | 536 |
GPC-2017 | GPC-2021 | GPC-BLUE | TKW-2014 | TKW-2017 | TKW-2021 | TKW-BLUE | |
GPC-2014 | 0.69*** | 0.50*** | 0.93*** | 0.00 | -0.09 | -0.08 | -0.05 |
GPC-2017 | 0.10 | 0.61*** | 0.04 | 0.01 | -0.01 | -0.02 | |
GPC-2021 | 0.47*** | 0.16* | -0.01 | 0.12 | 0.06 | ||
GPC-BLUE | -0.01 | -0.10 | -0.07 | 0.02 | |||
TKW-2014 | 0.39*** | 0.30*** | 0.60*** | ||||
TKW-2017 | 0.53*** | 0.42*** | |||||
TKW-2021 | 0.38*** |
QTL | Position range (Mbp)a | SNPs | Peak SNP | Peak SNP -log10(p) | Allele | Total QTL effect | R2 range | High confidence genes | Co- located locib |
QGpc.ippg-1A.1 | 32.17 – 38.57 | 4 | Excalibur_c7237_1084 | 7.36 | A/G | 16.10 | 17-19% | 81 | |
QGpc.ippg-1A.2 | 43.58 – 51.29 | 15 | AX-94522764 | 7.79 | A/G | 49.26 | 14-20% | 59 | [28,57] |
QGpc.ippg-1A.3 | 350.01 – 357.34 | 7 | wsnp_JD_c40990_29127031 | 5.85 | A/G | -18.06 | 13-14% | 55 | [37] |
QGpc.ippg-1B | 562.66 – 567.17 | 3 | Tdurum_contig8158_269 | 6.00 | A/G | 17.22 | 13-15% | 37 | |
QGpc.ippg-1D | 420.18 – 426.36 | 5 | wsnp_Ex_c9577_15855968 | 5.84 | T/C | -5.74 | 13-14% | 74 | |
QGpc.ippg-2A | 496.54 – 499.61 | 5 | Ra_c22880_760 | 8.38 | A/G | 22.58 | 16-22% | 16 | |
QGpc.ippg-2B.1 | 646.95 – 652.19 | 5 | Kukri_c4294_371 | 6.78 | A/G | -18.69 | 17% | 44 | [19] |
QGpc.ippg-2B.2 | 724.85 – 730.10 | 3 | Tdurum_contig56876_365 | 5.96 | T/C | -5.81 | 14% | 10 | |
QGpc.ippg-2D | 52.54 – 61.61 | 7 | D_contig28346_467 | 8.22 | T/C | -40.52 | 20-22% | 111 | |
QGpc.ippg-3A.1 | 54.14 – 59.01 | 10 | BS00032524_51 | 6.21 | T/C | 25.95 | 14-15% | 88 | |
QGpc.ippg-3A.2 | 483.60 – 489.86 | 6 | wsnp_Ex_c11039_17902115 | 6.31 | A/G | -13.00 | 15% | 46 | [56] |
QGpc.ippg-3A.3 | 513.89 – 521.21 | 15 | BobWhite_c9468_453 | 6.58 | A/G | -7.27 | 14-16% | 62 | [27] |
QGpc.ippg-3A.4 | 519.31 – 537.00 | 27 | AX-158523405 | 7.55 | T/C | -4.95 | 13-19% | 120 | |
QGpc.ippg-3A.5 | 554.46 – 564.35 | 16 | BS00011612_51 | 7.33 | A/G | 12.44 | 15-18% | 69 | |
QGpc.ippg-5A.1 | 84.17 – 94.44 | 10 | Tdurum_contig81753_70 | 5.87 | A/G | 12.05 | 14% | 46 | |
QGpc.ippg-5A.2 | 95.23 – 101.02 | 3 | wsnp_Ex_rep_c110023_92574403 | 5.89 | T/C | 17.72 | 14% | 25 | |
QGpc.ippg-5A.3 | 102.15 – 111.94 | 13 | wsnp_Ku_c328_679106 | 5.86 | A/G | 6.45 | 14% | 47 | |
QGpc.ippg-5B.1 | 56.83 – 60.66 | 5 | BS00024717_51 | 6.08 | T/C | -5.90 | 15% | 29 | |
QGpc.ippg-5B.2 | 425.77 – 429.63 | 5 | BS00068100_51 | 6.25 | A/G | -6.40 | 15% | 35 | [57] |
QGpc.ippg-5D | 550.49 – 556.35 | 4 | Kukri_c15823_196 | 7.99 | T/C | -0.91 | 14-23% | 107 | [28] |
QGpc.ippg-6A.1 | 453.14 – 456.16 | 3 | Tdurum_contig78006_158 | 5.96 | A/G | 5.28 | 13-14% | 32 | |
QGpc.ippg-6A.2 | 607.88 – 613.01 | 8 | wsnp_Ex_c1153_2213588 | 6.74 | T/C | -12.62 | 14-17% | 136 | |
QGpc.ippg-6B.1 | 450.41 – 457.45 | 4 | AX-158552532 | 6.57 | A/G | -12.03 | 14-16% | 33 | |
QGpc.ippg-6B.2 | 571.32 – 578.81 | 8 | wsnp_Ku_c11870_19296142 | 6.45 | T/C | 23.87 | 13-16% | 57 | |
QGpc.ippg-7A | 732.36 – 734.37 | 3 | AX-158589978 | 5.75 | T/C | 5.63 | 13-14% | 41 | |
In total: | 1,460 |
(a) | |||||||||
---|---|---|---|---|---|---|---|---|---|
QTL | Position range (Mbp)a | SNPs | Peak SNP | Peak SNP -log10 (p) |
Allele | Total QTL effect | R2 range | High confidence genes | Co- located locib |
QTkw.ippg-1A.1 | 1.38 - 6.06 | 3 | CAP12_c3074_192 | 7.96 | A/G | 1.31 | 14-19% | 70 | |
QTkw.ippg-1A.2 | 4.32 – 9.19 | 4 | AX-94692394 | 8.54 | T/C | 3.11 | 11-21% | 91 | [53] |
QTkw.ippg-1B.1 | 13.74 – 17.25 | 11 | BS00108057_51 | 8.01 | T/C | -1.76 | 14-22% | 74 | |
QTkw.ippg-1B.2 | 634.73 – 638.30 | 4 | BS00039135_51 | 7.17 | A/C | -3.55 | 9-17% | 47 | [21] |
QTkw.ippg-2B.1 | 11.47 – 16.91 | 4 | BobWhite_c26803_89 | 6.75 | T/C | 0.17 | 14-16% | 99 | [53] |
QTkw.ippg-2B.2 | 26.67 – 31.69 | 9 | Excalibur_c46590_363 | 6.29 | T/C | -2.00 | 13-15% | 104 | |
QTkw.ippg-2B.3 | 175.95 – 180.40 | 3 | wsnp_Ex_c51461_55394646 | 5.88 | A/G | -4.70 | 12-13% | 23 | |
QTkw.ippg-2B.4 | 638.79 – 647.01 | 16 | AX-95652816 | 6.67 | A/G | -5.76 | 13-16% | 73 | |
QTkw.ippg-2B.5 | 773.26 – 779.03 | 7 | Excalibur_c5438_274 | 8.40 | T/C | 2.39 | 15-21% | 76 | |
QTkw.ippg-2B.6 | 798.33 – 802.95 | 4 | BS00065264_51 | 6.62 | T/G | -3.38 | 13-16% | 45 | |
QTkw.ippg-3A | 45.83 – 51.48 | 3 | BS00011111_51 | 6.70 | T/G | -1.57 | 14-16% | 61 | [53] |
QTkw.ippg-3B.1 | 4. 54 -13.40 | 6 | AX-94783816 | 5.93 | A/T | 0.71 | 13-16% | 186 | [59] |
QTkw.ippg-3B.2 | 58.06 – 62.67 | 5 | RAC875_c34484_67 | 6.67 | A/G | -4.47 | 13-16% | 49 | [36] |
QTkw.ippg-3B.3 | 80.27 – 85.23 | 4 | wsnp_Ex_c1097_2105209 | 6.03 | A/G | 2.88 | 13-14% | 41 | |
QTkw.ippg-3B.4 | 242.98– 246.79 | 4 | CAP8_rep_c4453_136 | 5.94 | T/C | 0.04 | 13-14% | 28 | [58] |
QTkw.ippg-3B.5 | 542.04 – 549.85 | 4 | BS00062734_51 | 6.38 | A/G | -0.10 | 13-15% | 69 | |
QTkw.ippg-4B | 586.73 – 592.55 | 6 | Ex_c25467_851 | 6.07 | T/C | 0.01 | 13-14% | 39 | [63] |
QTkw.ippg-5A.1 | 480.95 – 487.60 | 4 | AX-158584685 | 6.18 | A/G | -0.09 | 13-14% | 69 | [30] |
QTkw.ippg-5A.2 | 667.20 – 672.45 | 6 | AX-109335926 | 6.83 | T/G | 3.89 | 13-16% | 57 | [58,63] |
QTkw.ippg-5B.1 | 7.41 – 10.45 | 4 | BS00067985_51 | 6.12 | T/C | -3.91 | 14% | 45 | |
QTkw.ippg-5B.2 | 558.27 – 561.94 | 5 | AX-110484654 | 6.45 | A/G | 4.57 | 14-15% | 28 | |
QTkw.ippg-5B.3 | 670.94 – 674.45 | 3 | CAP12_c2231_114 | 6.84 | A/C | 5.33 | 8-16% | 42 | [63] |
QTkw.ippg-5B.4 | 691.13 – 694.14 | 3 | Kukri_c1214_2316 | 6.75 | T/C | -5.44 | 14-16% | 37 | [53,63] |
QTkw.ippg-6A.1 | 5.23 – 8.23 | 4 | Tdurum_contig63703_1143 | 6.75 | T/C | 6.49 | 15-16% | 56 | [60] |
QTkw.ippg-6A.2 | 14.27 – 18.07 | 4 | RAC875_c2253_2011 | 5.99 | T/C | 0.61 | 11-14% | 91 | [59] |
QTkw.ippg-6A.3 | 27.71 – 38.19 | 38 | BS00023140_51 | 7.62 | T/C | -16.71 | 14-18% | 165 | |
QTkw.ippg-6A.4 | 583.44 – 587.60 | 5 | AX-94475556 | 7.11 | T/C | 4.28 | 13-17% | 51 | [53,58] |
QTkw.ippg-6A.5 | 607.93 – 613.36 | 11 | Kukri_c11902_580 | 8.76 | T/C | 1.50 | 17-22% | 163 | [53,61,63] |
QTkw.ippg-6B.1 | 286.42 – 291.69 | 4 | Kukri_c26279_503 | 5.71 | T/C | -0.04 | 13% | 23 | |
QTkw.ippg-6B.2 | 307.75 – 313.20 | 4 | RAC875_c41604_1001 | 5.75 | T/C | -0.11 | 13% | 10 | |
QTkw.ippg-6B.3 | 415.23 – 421.77 | 3 | Kukri_c55096_140 | 5.69 | A/C | -1.54 | 13% | 19 | |
QTkw.ippg-6B.4 | 703.28 – 707.38 | 3 | wsnp_Ex_rep_c67100_65576598 | 7.50 | A/G | -1.69 | 17-18% | 112 | [53] |
QTkw.ippg-6D | 459.54 – 469.55 | 40 | AX-158600736 | 8.70 | T/C | 26.55 | 16-22% | 211 | |
QTkw.ippg-7A | 18.01 – 21.17 | 9 | AX-94791713 | 5.80 | T/C | 10.51 | 13% | 70 | [53] |
QTkw.ippg-7B | 646.65 – 652.04 | 8 | AX-158592437 | 6.75 | A/G | 0.15 | 13% | 53 | [62] |
In total: | 2,477 | ||||||||
(b) | |||||||||
QTL/Chr. | Position (Mbp) | Env. | SNP | -log10 (p) | Allele | Effect | R2 | High confidence genes |
Co- located locib |
Stable QTNs within a LD blockc | |||||||||
QTkw.ippg-1A.2 | 6.32 | 2017, BLUE | Kukri_c8390_1102 | 6.92 | A/G | -5.01 | 11% | ||
QTkw.ippg-1B.2 | 636.75 | 2021, BLUE | BS00039135_51 | 7.17 | A/C | -2.00 | 17% | [21] | |
QTkw.ippg-1B.2 | 636.75 | 2021, BLUE | BobWhite_c2844_569 | 7.15 | A/C | -2.00 | 17% | [21] | |
QTkw.ippg-1B.2 | 636.80 | 2021, BLUE | AX-111478328 | 7.14 | A/G | -1.99 | 17% | [21] | |
QTkw.ippg-6A.2 | 16.57 | 2017, BLUE | RAC875_c2253_2011 | 5.99 | T/C | -1.49 | 14% | ||
QTkw.ippg-6A.2 | 16.57 | 2017, BLUE | Kukri_c10377_376 | 5.74 | A/G | -1.45 | 13% | ||
Stable QTNs not in a LD block | |||||||||
1A | 594.10 | 2017, BLUE | AX-95160390 | 6.77 | C/G | 1.56 | 17% | 21 | |
2B | 101.30 | 2017, BLUE | Excalibur_rep_c66832_742 | 5.68 | T/G | 4.10 | 13% | 27 | [53] |
2B | 104.57 | 2017, BLUE | RFL_Contig2231_346* | 5.57 | A/G | 1.94 | 13% | 38 | [53] |
2B | 104.58 | 2017, BLUE | Tdurum_contig68806_677* | 5.74 | T/C | -1.95 | 13% | [53] | |
6A | 77.53 | 2017, 2021, BLUE | RAC875_rep_c114561_587 | 5.81 | A/G | 4.24 | 14% | 29 | [58] |
6A | 100.77 | 2017, BLUE | AX-95145282** | 7.84 | A/G | 4.78 | 20% | 49 | |
6A | 100.80 | 2017, BLUE | AX-158588216** | 5.65 | A/G | 4.09 | 13% | ||
6B | 159.70 | 2017, BLUE | GENE-3659_104 | 5.84 | T/C | -4.24 | 14% | 51 | |
In total: | 215 |
QTL | Gene ID | Anotation function |
---|---|---|
QGpc.ippg-1A.1 | TraesCS1A01G052600 | Germin-like protein |
TraesCS1A01G052700 | Germin-like protein | |
TraesCS1A01G052900 | Germin-like protein | |
TraesCS1A01G053000 | Germin-like protein | |
TraesCS1A01G053100 | Germin-like protein | |
TraesCS1A01G053700 | Ubiquitin activating enzyme E1 | |
QGpc.ippg-1A.2 | TraesCS1A01G063600 | Ubiquitin-conjugating enzyme E2 |
TraesCS1A01G066100 | 11S globulin seed storage protein | |
TraesCS1A01G069000 | bZIP transcription factor family protein | |
QGpc.ippg-1A.3 | TraesCS1A01G196300 | 26S proteasome regulatory subunit family protein |
TraesCS1A01G197400 | WRKY family transcription factor | |
TraesCS1A01G197600 | Peptide transporter | |
TraesCS1A01G197700 | Peptide transporter | |
QGpc.ippg-1B | TraesCS1B01G338500 | Cysteine protease family protein |
TraesCS1B01G338800 | Thioredoxin | |
TraesCS1B01G339000 | Thioredoxin | |
QGpc.ippg-1D | TraesCS1D01G330800 | E3 ubiquitin-protein ligase MARCH6 |
TraesCS1D01G331800 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily | |
TraesCS1D01G331900 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily | |
TraesCS1D01G332200 | Basic-leucine zipper (BZIP) transcription factor family | |
TraesCS1D01G332500 | Thioredoxin | |
TraesCS1D01G333100 | E3 ubiquitin-protein ligase | |
QGpc.ippg-2A | TraesCS2A01G289800 | Alpha-amylase |
TraesCS2A01G289800 | Alpha-amylase | |
QGpc.ippg-2B.1 | TraesCS2B01G453000 | Ubiquitin-specific protease family C19-related protein |
TraesCS2B01G453100 | Ubiquitin-specific protease family C19 protein | |
TraesCS2B01G454300 | WRKY transcription factor | |
QGpc.ippg-2B.2 | TraesCS2B01G533300 | Sucrose transporter |
QGpc.ippg-2D | TraesCS2D01G100500 | Thioredoxin, putative |
TraesCS2D01G100600 | NAC domain protein | |
TraesCS2D01G100900 | NAC domain protein, | |
TraesCS2D01G100700 | NAC domain protein, | |
TraesCS2D01G100800 | NAC domain protein, | |
TraesCS2D01G101300 | NAC domain protein | |
TraesCS2D01G101400 | NAC domain protein | |
TraesCS2D01G102300 | Cysteine protease | |
TraesCS2D01G104400 | E3 ubiquitin-protein ligase SHPRH | |
TraesCS2D01G104500 | WRKY transcription factor | |
TraesCS2D01G104600 | WRKY transcription factor | |
TraesCS2D01G104700 | WRKY transcription factor | |
TraesCS2D01G105400 | Basic-leucine zipper domain | |
TraesCS2D01G106200 | Cysteine proteinase | |
TraesCS2D01G109300 | Germin-like protein 1 | |
QGpc.ippg-3A.1 | TraesCS3A01G085500 | bZIP transcription factor, putative (DUF1664) |
TraesCS3A01G090700 | E3 ubiquitin-protein ligase SINA-like 10 | |
QGpc.ippg-3A.3 | TraesCS3A01G285600 | Proteasome subunit alpha type |
TraesCS3A01G287800 | Eukaryotic aspartyl protease family protein | |
TraesCS3A01G289000 | Senescence-associated family protein (DUF581) | |
TraesCS3A01G289700 | WRKY transcription factor | |
TraesCS3A01G289800 | PROTEIN TARGETING TO STARCH (PTST) | |
QGpc.ippg-3A.4 | TraesCS3A01G293700 | BZIP transcription factor family protein, putative |
TraesCS3A01G297600 | Subtilisin-like protease | |
TraesCS3A01G299400 | NAM-like protein | |
QGpc.ippg-3A.5 | TraesCS3A01G318700 | 26S proteasome regulatory subunit S2 1B |
TraesCS3A01G319300 | Cysteine protease | |
TraesCS3A01G319800 | Eukaryotic aspartyl protease family protein | |
QGpc.ippg-5A.1 | TraesCS5A01G073000 | Amino acid transporter, putative |
TraesCS5A01G076000 | Cysteine protease | |
QGpc.ippg-5A.3 | TraesCS5A01G081500 | Amino acid transporter family protein, putative |
QGpc.ippg-5B.1 | TraesCS5B01G054200 | NAC domain-containing protein |
TraesCS5B01G054600 | E3 ubiquitin-protein ligase | |
TraesCS5B01G054700 | Serine-protease HtrA-like | |
QGpc.ippg-5B.2 | TraesCS5B01G245300 | Peptide transporter |
QGpc.ippg-5D | TraesCS5D01G543600 | 26S proteasome non-ATPase regulatory subunit |
QGpc.ippg-6A.1 | TraesCS6A01G242000 | WRKY transcription factor |
TraesCS6A01G243100 | bZIP transcription factor (DUF630 and DUF632) | |
QGpc.ippg-6A.2 | TraesCS6A01G394200 | Thioredoxin |
TraesCS6A01G402200 | Mitochondrial metalloendopeptidase OMA1 | |
TraesCS6A01G402300 | Mitochondrial metalloendopeptidase OMA1 | |
TraesCS6A01G406700 | NAC domain protein | |
QGpc.ippg-6B.1 | TraesCS6B01G253400 | Oligopeptide transporter, putative |
QGpc.ippg-6B.2 | TraesCS6B01G325700 | Senescence-associated family protein, putative (DUF581) |
TraesCS6B01G325800 | Senescence-associated family protein, putative (DUF581) | |
TraesCS6B01G327400 | Mitochondrial metalloendopeptidase OMA1 | |
TraesCS6B01G327500 | Glutamine synthetase | |
TraesCS6B01G329200 | NAC domain-containing protein | |
TraesCS6B01G329400 | NAC domain-containing protein 29 | |
QGpc.ippg-7A | TraesCS7A01G561400 | Cysteine protease, putative |
TraesCS7A01G562100 | Thioredoxin | |
TraesCS7A01G563600 | Thioredoxin |
QTL/stable QTN | Gene ID | Annotation function |
---|---|---|
QTkw.ippg-1A.1 | TraesCS1A01G005700 | E3 ubiquitin-protein ligase ORTHRUS 2 |
TraesCS1A01G007200 | Gamma-gliadin | |
TraesCS1A01G007300 | Gamma-gliadin | |
TraesCS1A01G007400 | Gamma-gliadin | |
TraesCS1A01G007700 | Gamma-gliadin | |
TraesCS1A01G008000 | Low molecular weight glutenin subunit | |
QTkw.ippg-1A.2 | TraesCS1A01G010900 | Low molecular weight glutenin subunit |
QTkw.ippg-1B.1 | TraesCS1B01G029300 | E3 ubiquitin-protein ligase pellino homolog 3 |
QTkw.ippg-1B.2 | TraesCS1B01G407700 | Protease inhibitor/seed storage/lipid transfer protein family |
TraesCS1B01G407800 | Protease inhibitor/seed storage/lipid transfer protein family | |
TraesCS1B01G407900 | Protease inhibitor/seed storage/lipid transfer protein family | |
TraesCS1B01G408000 | Protease inhibitor/seed storage/lipid transfer protein family | |
QTkw.ippg-2B.1 | TraesCS2B01G025900 | Subtilisin-like protease 6 |
QTkw.ippg-2B.2 | TraesCS2B01G057600 | NRT1/PTR family protein 2.2 |
TraesCS2B01G057700 | NRT1/PTR family protein 2.2 | |
TraesCS2B01G058400 | Serine carboxypeptidase family protein, expressed | |
TraesCS2B01G062700 | Sucrose transporter-like protein | |
TraesCS2B01G055700 | Bidirectional sugar transporter SWEET | |
TraesCS2B01G055800 | Bidirectional sugar transporter SWEET | |
TraesCS2B01G055900 | Bidirectional sugar transporter SWEET | |
TraesCS2B01G056000 | Bidirectional sugar transporter SWEET | |
TraesCS2B01G056100 | Bidirectional sugar transporter SWEET | |
QTkw.ippg-2B.6 | TraesCS2B01G626000 | Protein NRT1/ PTR FAMILY 5.5 |
TraesCS2B01G626100 | Protein NRT1/ PTR FAMILY 5.5 | |
TraesCS2B01G626600 | Protein NRT1/ PTR FAMILY 5.5 | |
TraesCS2B01G626700 | Protein NRT1/ PTR FAMILY 5.5 | |
TraesCS2B01G627000 | NAC domain-containing protein, putative | |
TraesCS2B01G627100 | NAC domain-containing protein, putative | |
TraesCS2B01G627200 | NAC domain-containing protein, putative | |
TraesCS2B01G629700 | E3 ubiquitin-protein ligase SINA-like 10 | |
QTkw.ippg-3A | TraesCS3A01G077900 | NAC domain-containing protein |
TraesCS3A01G078400 | NAC domain protein | |
TraesCS3A01G078500 | E3 ubiquitin ligase family protein | |
QTkw.ippg-3B.1 | TraesCS3B01G018000 | E3 ubiquitin-protein ligase |
TraesCS3B01G018100 | E3 ubiquitin-protein ligase | |
TraesCS3B01G018200 | E3 ubiquitin-protein ligase | |
TraesCS3B01G019600 | E3 ubiquitin-protein ligase | |
TraesCS3B01G026900 | E3 ubiquitin-protein ligase | |
TraesCS3B01G027000 | E3 ubiquitin-protein ligase | |
TraesCS3B01G027400 | E3 ubiquitin-protein ligase | |
TraesCS3B01G027500 | E3 ubiquitin-protein ligase | |
TraesCS3B01G028000 | E3 ubiquitin-protein ligase | |
TraesCS3B01G028800 | E3 ubiquitin-protein ligase | |
TraesCS3B01G028900 | E3 ubiquitin-protein ligase | |
TraesCS3B01G014300 | Expansin protein | |
TraesCS3B01G014400 | Expansin protein | |
TraesCS3B01G028100 | Cell wall invertase | |
TraesCS3B01G028500 | Cell wall invertase | |
QTkw.ippg-3B.2 | TraesCS3B01G092800 | NAC domain-containing protein |
TraesCS3B01G092900 | NAC domain-containing protein | |
TraesCS3B01G093300 | NAC domain protein | |
TraesCS3B01G093400 | E3 ubiquitin ligase family protein | |
QTkw.ippg-3B.3 | TraesCS3B01G116800 | E3 ubiquitin-protein ligase |
TraesCS3B01G116200 | Serine carboxypeptidase, putative | |
TraesCS3B01G116300 | Serine carboxypeptidase, putative | |
TraesCS3B01G116400 | Serine carboxypeptidase, putative | |
QTkw.ippg-3B.4 | TraesCS3B01G208300 | NAC domain-containing protein |
TraesCS3B01G209300 | Sucrose synthase 3 | |
QTkw.ippg-3B.5 | TraesCS3B01G336200 | E3 ubiquitin-protein ligase |
TraesCS3B01G336900 | ADP-glucose pyrophosphorylase small subunit 2 | |
TraesCS3B01G339100 | Subtilisin-like protease | |
QTkw.ippg-5A.1 | TraesCS5A01G271500 | NAC domain protein |
TraesCS5A01G275900 | NAC domain-containing protein | |
QTkw.ippg-5A.2 | TraesCS5A01G507500 | E3 ubiquitin-protein ligase SINA-like 10 |
QTkw.ippg-5B.1 | TraesCS5B01G007600 | E3 ubiquitin-protein ligase |
QTkw.ippg-5B.2 | TraesCS5B01G382100 | E3 ubiquitin protein ligase DRIP2 |
QTkw.ippg-6A.2 | TraesCS6A01G030700 | High affinity nitrate transporter |
TraesCS6A01G030800 | High affinity nitrate transporter | |
TraesCS6A01G030900 | High affinity nitrate transporter | |
TraesCS6A01G031000 | High affinity nitrate transporter | |
TraesCS6A01G031100 | High affinity nitrate transporter | |
TraesCS6A01G031200 | High affinity nitrate transporter | |
TraesCS6A01G032400 | High affinity nitrate transporter | |
TraesCS6A01G032500 | High affinity nitrate transporter | |
TraesCS6A01G032800 | High affinity nitrate transporter | |
TraesCS6A01G032900 | High affinity nitrate transporter | |
TraesCS6A01G033000 | High affinity nitrate transporter | |
TraesCS6A01G033100 | High affinity nitrate transporter | |
TraesCS6A01G033200 | High affinity nitrate transporter | |
TraesCS6A01G028800 | Subtilisin-like protease | |
TraesCS6A01G036800 | Subtilisin-like protease | |
TraesCS6A01G032700 | Expansin protein | |
QTkw.ippg-6A.3 | TraesCS6A01G057400 | NAC domain-containing protein, putative |
TraesCS6A01G065600 | NAC domain | |
TraesCS6A01G065700 | NAC domain | |
QTkw.ippg-6A.5 | TraesCS6A01G406700 | NAC domain protein |
QTkw.ippg-6B.1 | TraesCS6B01G214700 | Cytokinin oxidase/dehydrogenase |
QTkw.ippg-6B.3 | TraesCS6B01G238700 | High affinity nitrate transporter |
TraesCS6B01G238800 | High affinity nitrate transporter | |
QTkw.ippg-6D | TraesCS6D01G390200 | NAC domain protein |
TraesCS6D01G396300 | E3 ubiquitin-protein ligase | |
TraesCS6D01G393600 | Sucrose transporter | |
QTkw.ippg-7A | TraesCS7A01G040900 | Sucrose synthase |
Stable QTN not in a LD block | ||
Excalibur_rep_c66832_742 | TraesCS2B01G136000 | E3 ubiquitin-protein ligase |
RFL_Contig2231_346* | TraesCS2B01G136200 | Subtilisin-like protease |
Tdurum_contig68806_677* | TraesCS2B01G137200 | Subtilisin-like protease |
RAC875_rep_c114561_587 | TraesCS6A01G108300 | NAC domain-containing protein, putative |
TraesCS6A01G110100 | Squamosa promoter-binding-like protein | |
AX-95145282**AX-158588216** | TraesCS6A01G125900 | Squamosa promoter-binding protein-like transcription factor |
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