Data Reuse in Agricultural Genomics Research: Present Challenges and Future Solutions

Alenka Hafner; Victoria DeLeo; Cecilia Deng; Christine G. Elsik; Damarius Fleming; Peter W. Harrison; Theodore S. Kalbfleisch; Bruna Petry; Boas Pucker; Elsa H. Quezada-Rodríguez; Christopher K. Tuggle; James Koltes

doi:10.20944/preprints202401.0780.v1

Preprint Communication Version 1 Preserved in Portico This version is not peer-reviewed

Version 1 : Received: 10 January 2024 / Approved: 10 January 2024 / Online: 10 January 2024 (10:07:03 CET)

The scientific community has long benefited from the opportunities provided by data reuse. Recognizing the need to identify the challenges and bottlenecks to reuse in the agricultural research community and propose solutions for them, the data reuse working group was started within the AgBioData consortium (https://www.agbiodata.org/) framework. Here, we identify the limitations of data standards, metadata deficiencies, data interoperability, data ownership, data availability, user skill level, resource availability, and equity issues, with a specific focus on agricultural genomics research. We propose possible solutions stakeholders could implement to mitigate and overcome these challenges and provide an optimistic perspective on the future of genomics and transcriptomics data reuse.

data reuse; agriculture; open data; metadata; data standards; equity

Biology and Life Sciences, Agricultural Science and Agronomy

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Data Reuse in Agricultural Genomics Research: Present Challenges and Future Solutions

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