Preprint Article Version 1 Preserved in Portico This version is not peer-reviewed

Functional and Multi-Omics Analysis of an Optimized CRISPR-Mediated FURIN Depletion in Cultured Pro-Monocytic Cells

Version 1 : Received: 1 December 2023 / Approved: 4 December 2023 / Online: 4 December 2023 (10:18:09 CET)

How to cite: Chua, R.; Wang, L.; Singaraja, R.; Ghosh, S. Functional and Multi-Omics Analysis of an Optimized CRISPR-Mediated FURIN Depletion in Cultured Pro-Monocytic Cells. Preprints 2023, 2023120178. https://doi.org/10.20944/preprints202312.0178.v1 Chua, R.; Wang, L.; Singaraja, R.; Ghosh, S. Functional and Multi-Omics Analysis of an Optimized CRISPR-Mediated FURIN Depletion in Cultured Pro-Monocytic Cells. Preprints 2023, 2023120178. https://doi.org/10.20944/preprints202312.0178.v1

Abstract

The pro-protein convertase FURIN (PCSK3) is implicated in a wide range of normal and pathological biological processes such as infectious disease, cancer and cardiovascular disease. Previously, we performed a systemic inhibition of FURIN in a mouse model of atherosclerosis and demonstrated significant plaque reduction and alterations in macrophage function. To understand the cellular mechanisms affected by FURIN inhibition in myeloid cells, we optimized a CRISPR-mediated gene deletion protocol for successfully deriving hemizygous (HZ) and nullizygous (NZ) FURIN knockout clones in U937 monocytic cells using lipotransfection based procedures and a dual guide RNA delivery strategy. We observed differences in monocyte and macrophage functions involving phagocytosis, lipid accumulation, cell migration, inflammatory gene expression, cytokine release patterns, secreted proteomics (cytokines) and whole-genome transcriptomics between wild-type, HZ and NZ FURIN clones. These studies provide a mechanistic basis on the possible roles of myeloid cell FURIN in cardiovascular disorders.

Keywords

myeloid cells; FURIN protease; gene editing; functional assays; genomics; cytokine secretion

Subject

Biology and Life Sciences, Cell and Developmental Biology

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