Preprint Review Version 1 Preserved in Portico This version is not peer-reviewed

Comprehensive Strategy for Identifying Extracellular Vesicle Surface Proteins as Biomarkers for Non-alcoholic Fatty Liver Disease

Version 1 : Received: 19 July 2023 / Approved: 20 July 2023 / Online: 21 July 2023 (10:05:15 CEST)

A peer-reviewed article of this Preprint also exists.

Garcia, N.A.; Mellergaard, M.; Gonzalez-King, H.; Salomon, C.; Handberg, A. Comprehensive Strategy for Identifying Extracellular Vesicle Surface Proteins as Biomarkers for Non-Alcoholic Fatty Liver Disease. Int. J. Mol. Sci. 2023, 24, 13326. Garcia, N.A.; Mellergaard, M.; Gonzalez-King, H.; Salomon, C.; Handberg, A. Comprehensive Strategy for Identifying Extracellular Vesicle Surface Proteins as Biomarkers for Non-Alcoholic Fatty Liver Disease. Int. J. Mol. Sci. 2023, 24, 13326.

Abstract

Non-alcoholic fatty liver disease (NAFLD) is a liver disorder that has become a global health concern due to its increasing prevalence. Currently, there is a need for reliable biomarkers to aid in the diagnosis and prognosis of NAFLD. Extracellular vesicles (EVs) are promising candidates in biomarker discovery, as they carry proteins that reflect the pathophysiological state of the liver. In this review, we developed a list of EV proteins that could be used as diagnostic biomarkers for NAFLD. We employed a multi-step strategy that involved reviewing and comparing various sources of information. Firstly, we reviewed papers that have studied EVs proteins as biomarkers in NAFLD, as well as papers that have studied circulating proteins as biomarkers in NAFLD. To further identify potential candidates, we utilized the EV database Vesiclepedia.org to qualify each protein. Finally, we consulted the Human Protein Atlas to search for candidates' localization, focusing on membrane proteins. By integrating these sources of information, we developed a comprehensive list of potential EVs membrane protein biomarkers that could aid in the diagnosis and monitoring of NAFLD. In conclusion, our multi-step strategy for identifying EV-based protein biomarkers for NAFLD provides a comprehensive approach that can also be applied for other diseases. The protein candidates identified through this approach could have significant implications for the development of non-invasive diagnostic tests for NAFLD and improve the management and treatment of this prevalent liver disorder.

Keywords

Non-alcoholic fatty liver; Extracellular vesicles; Biomarkers; Surface proteins

Subject

Biology and Life Sciences, Endocrinology and Metabolism

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