A Deep Dive into Genome Assemblies of Non-vertebrate Animals

Version 1 : Received: 8 November 2021 / Approved: 9 November 2021 / Online: 9 November 2021 (13:25:39 CET)
Version 2 : Received: 4 March 2022 / Approved: 7 March 2022 / Online: 7 March 2022 (10:00:56 CET)
Version 3 : Received: 3 May 2022 / Approved: 5 May 2022 / Online: 5 May 2022 (10:38:09 CEST)

A peer-reviewed article of this Preprint also exists.

Guiglielmoni, N.; Rivera-Vicéns, R.; Koszul, R.; Flot, J.-F. A Deep Dive into Genome Assemblies of Non-Vertebrate Animals. Peer Community Journal 2022, 2, doi:10.24072/pcjournal.128. Guiglielmoni, N.; Rivera-Vicéns, R.; Koszul, R.; Flot, J.-F. A Deep Dive into Genome Assemblies of Non-Vertebrate Animals. Peer Community Journal 2022, 2, doi:10.24072/pcjournal.128.

Abstract

Non-vertebrate species represent about ~95% of known metazoan (animal) diversity. They remain to this day relatively unexplored genetically, but understanding their genome structure and function is pivotal for expanding our current knowledge of evolution, ecology and biodiversity. Following the continuous improvements and decreasing costs of sequencing technologies, many genome assembly tools have been released, leading to a significant amount of genome projects being completed in recent years. In this review, we examine the current state of genome projects of non-vertebrate animal species. We present an overview of available sequencing technologies, assembly approaches, as well as pre and post-processing steps, genome assembly evaluation methods, and their application to non-vertebrate animal genomes.

Keywords

genome assembly; sequencing; non-vertebrate animals

Subject

Biology and Life Sciences, Biochemistry and Molecular Biology

Copyright: This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Received: 7 March 2022
Commenter: Nadège Guiglielmoni
Commenter's Conflict of Interests: Author

Comment: The paper was updated following comments of reviewers.

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