The difference of smoker’s topography has been found to be a function of sex, personality, nicotine yield, cigarette type (i.e., flavored versus non-flavored) ethnicity and etc. We evaluated the puffing behaviors of Korean smokers and its association with smoking-related biomarker levels. A sample of 300 participants was randomly recruited from metropolitan areas, South Korea. Topography measures during a 24-hour period were obtained using a CReSS pocket device. Korean male smokers smoked two puffs less per cigarette, compared to female smokers [15.0 (13.0–19.0) vs. 17.5 (15.0–21.0) as median (Interquartile range)], but had a significantly larger puff volume [62.7 (52.7–75.5) mL vs. 53.5 (42.0–64.2) mL); p = 0.012]. The interpuff interval was similar between men and women [8.9 (6.5–11.2) s vs. 8.3 (6.2–11.0) s; p = 0.122] but much shorter than other study results. A dose-response association (p = 0.0011) was observed between daily total puff volumes and urinary cotinine concentrations, after controlling for sex, age, household income level, nicotine addiction level. Understanding of the difference of topography measures, especially, larger puff volume and shorter interpuff interval of Korean smokers may help to overcome potential underestimation of internal dose of hazardous substitutes of smoking or corresponding its health effect.