Amyloids result from the aggregation of several unrelated proteins, due to either specific mutations or promoting intra- or extra-cellular conditions. Structurally, they are rich in intermolecular β-sheets and are the causative agents of several diseases, both neurodegenerative and systemic. It is believed that the most toxic species are small aggregates, referred to as oligomers, rather than the final fibrillar assemblies. Their mechanisms of toxicity are mostly mediated by aberrant interactions with the cell membranes, with resulting derangement of membrane-related functions. Much effort is being put in the search for natural antiamyloid agents, and/or in the development of synthetic molecules. Actually, it is well documented that the prevention of amyloid aggregation results in several cytoprotective effects. Here, we portray the state of the art in the field. Several natural compounds are effective antiamyloid agents, notably tetracyclines and polyphenols. They are generally non-specific, as documented by their partially overlapping mechanisms, and the capability to interfere with the aggregation of several unrelated proteins. Among rationally designed molecules, we mention the prominent examples of β-breakers peptides, whole antibodies and fragments thereof, and the special case of drugs contrasting transthyretin aggregation. In this framework, we stress the pivotal role of the computational approaches. When combined with biophysical methods, in several cases they have helped clarify in detail the protein/drug modes of interaction, which make it plausible that more effective drugs will be developed in the future.

Scientists are gradually becoming aware of the challenges in the understanding of the very root mechanisms of massively parallel computations that are observed in literally all scientific disciplines ranging from cosmology, physics, across chemistry, biochemistry, and ending in biology. This leads us to the main motivation and simultaneously to the central thesis of this review: “Can we design artificial, massively-parallel, self-organized, emergent, error-resilient, computational environments?” A large number of simulations along with examples and counter-examples, finalized by a list of the future directions, are giving hints and partial answers to the main thesis. This all together is opening the crucial question whether there is existing a deeper, beyond the Turing machine theoretical description of massively-parallel computing. Important information dealing with this topic is reviewed along with highly expressive animations generated by the open-source, Python software GoL-N24. The perspective, future directions including applications in robotics and biology of this research are discussed in the light of known information.