1. Introduction
The primary challenge in manifold learning is the “tearing” of local neighborhoods during deep compression [
1,
6]. While traditional linear methods like PCA fail to capture non-linear local density, recent developments have explored encoding classical data into quantum mechanical frameworks to exploit the high-dimensional geometry of Hilbert spaces [
3,
8]. Our work extends this concept to the problem of deep dimensionality reduction. We propose a recursive Hamiltonian solver that reduces feature dimensions by evolving states toward a ground-state configuration, mimicking the physical process of spin alignment [
4]. This study analyzes the transition from global geometric alignment to local topological cohesion from 512 to 1 dimension.
2. Methodology
2.1. Global Semantic Mapping
The algorithm first establishes a “Semantic Frame of Reference” by computing weighted projections for each sample following the logic of a Self-Similarity (KQ) Matrix. This ensures that global relational dependencies are captured prior to localized reduction [
9]. Weights
are determined by angular affinity (normalized dot product):
The promoted vector
for each sample
q is the weighted sum of all samples in the dataset:
2.2. Diagnostic Metrics
To evaluate the stability of the manifold throughout the reduction process, we utilize the following formal metrics grounded in information theory and spectral geometry [
10,
11]:
-
A. Global Alignment (Relational Preservation)
Measures the preservation of global similarity structure relative to the initial 512D state. Let
be the vector of cosine similarities between a reference
r and all other samples in 512D space. The alignment at dimension
m is:
where
.
B. Information Decay (KL-Divergence)
Quantifies the information loss between the reference softmax distribution
P and current state
Q [
10]:
where
and
are obtained via a Softmax transform of similarities with temperature
:
C. System Entropy (Manifold Diffusion)
Measures the concentration or uncertainty of the manifold’s local structure based on Shannon entropy:
D. Scale-Invariant Manifold Translation (Rank Drift)
Tracks the ordinal position R of the k-closest neighbors to observe drift trajectories.
E. Distance-from-Mean Cohesion (Internal Tightness)
Calculates the integrity of the neighbor pack relative to its own moving center
:
3. Proposed Method
3.1. Hamiltonian Formulation
The reduction from
to
m dimensions is achieved by treating adjacent feature pairs
as magnetic field parameters
and
in a transverse-field Ising model [
4,
12].
where
and
. The Hamiltonian equation is:
Spin operators are defined as
.
3.2. Dimensional Reduction and Feature Extraction
The reduced feature
is the expectation value of the spin-correlation operator in the ground state
. This mapping projects classical data into non-linear correlations within the quantum state:
At any recursive reduction level
L, the reduction is expressed as:
For
,
, where
is the initial feature set before reduction.
4. Results and Analysis
The stability of the quantum-inspired dimensional reduction was evaluated across a gradient of 512 to 1 dimension for averaging at least 100 trials of randomizing the original matrix before reductions. Our results reveal a fundamental phase transition in manifold stability governed by the dimensional compression ratio.
Figure 1.
Tracks the ordinal position R of the k-closest neighbors. The parallelism in these trajectories illustrates the Cohesive Topological Phase (m < 128), where neighbors drift together as a ’solid pack’ rather than scattering independently.
Figure 1.
Tracks the ordinal position R of the k-closest neighbors. The parallelism in these trajectories illustrates the Cohesive Topological Phase (m < 128), where neighbors drift together as a ’solid pack’ rather than scattering independently.
Figure 2.
Tracks the ordinal position R of the k-closest neighbors for a small sample size of 10, breaking the small data curse.
Figure 2.
Tracks the ordinal position R of the k-closest neighbors for a small sample size of 10, breaking the small data curse.
Figure 3.
Ordinal rank trajectories of the three nearest neighbors. The inverted y-axis depicts the drift of neighbor identities from their origin. The high degree of parallelism between trajectories (verified by low local variance ) confirms the Topological Solid behavior, where clusters translate as rigid bodies through the feature space without internal tearing.
Figure 3.
Ordinal rank trajectories of the three nearest neighbors. The inverted y-axis depicts the drift of neighbor identities from their origin. The high degree of parallelism between trajectories (verified by low local variance ) confirms the Topological Solid behavior, where clusters translate as rigid bodies through the feature space without internal tearing.
Figure 4.
Evolutionary trajectory of information loss across the dimensional gradient. The logarithmic increase in KL-Divergence at m=128 marks the phase transition from geometric preservation to topological stability. The overlap between n=10 (red) and n=100 (black) demonstrates the scale-invariant nature of the information decay. Shannon entropy of the similarity distribution. The sharp decline (Entropy Collapse) between 256D and 32D illustrates the system converging toward a low-energy Hamiltonian ground state, effectively filtering stochastic noise while concentrating local feature correlations.
Figure 4.
Evolutionary trajectory of information loss across the dimensional gradient. The logarithmic increase in KL-Divergence at m=128 marks the phase transition from geometric preservation to topological stability. The overlap between n=10 (red) and n=100 (black) demonstrates the scale-invariant nature of the information decay. Shannon entropy of the similarity distribution. The sharp decline (Entropy Collapse) between 256D and 32D illustrates the system converging toward a low-energy Hamiltonian ground state, effectively filtering stochastic noise while concentrating local feature correlations.
Figure 5.
Measures the internal tightness of neighbor packs relative to their moving centers. Stability at approximately 60 % for n=10 at m=8 demonstrates the resilience of the local manifold.
Figure 5.
Measures the internal tightness of neighbor packs relative to their moving centers. Stability at approximately 60 % for n=10 at m=8 demonstrates the resilience of the local manifold.
Figure 6.
Visualizes the High-Fidelity Spin Phase (m 128) where near-unit cosine similarity is maintained, followed by ’alignment collapse’ at the m=64 transition point.
Figure 6.
Visualizes the High-Fidelity Spin Phase (m 128) where near-unit cosine similarity is maintained, followed by ’alignment collapse’ at the m=64 transition point.
Figure 7.
Contrasts near and far similarity samples. The Separation Zone illustrates the model’s capacity to suppress ’manifold tearing’ and maintain distinct community identities and separation gap.
Figure 7.
Contrasts near and far similarity samples. The Separation Zone illustrates the model’s capacity to suppress ’manifold tearing’ and maintain distinct community identities and separation gap.
4.1. Global Geometric Alignment
As shown in
Figure 6, the system maintains near-perfect geometric alignment during the initial stages of reduction. In the High-Fidelity Spin Phase (m > 128), the cosine similarity score remains above 0.99 for both n=10 and n=100 sample sizes. However, a rapid alignment collapse occurs at m=64, where the global geometric frame of reference fractures.
4.2. Local Topological Cohesion and Rank Drift
Despite the loss of global alignment, local neighborhood structures remain remarkably stable.
Figure 5 illustrates the Distance-from-Mean Cohesion, measuring the internal tightness of neighbor packs. At m=8, the system retains high relative cohesion 61.5 % for n=10 and 54.1 % for n=100.
Figure 1 and
Figure 2 demonstrate that while neighbors drift significantly from their original ordinal ranks, they move along closely parallel trajectories. This rigid-body translation ensures that local community identities are preserved even at extreme compression. The transition between phases is further corroborated by information-theoretic diagnostics in
Figure 4. KL-Divergence shows a sharp increase at the m=128 boundary, marking the point where global information starts to decay. An entropy collapse is observed as features align toward the Hamiltonian ground state. For n=10, this critical point occurs at 256D, whereas for n=100, it shifts to 128D.
4.3. Performance Metrics
| Metric |
Phase |
|
|
Delta |
| Global Alignment |
Ordinal (128D) |
0.999 |
1.000 |
0.10% |
| Relative Cohesion |
Topological (8D) |
60.60% |
59.60% |
1.00% |
| Mean Rank Drift |
Transition (64D) |
4.88/10 |
45/100 |
3.80% |
| Local Variance () |
Extreme (1D) |
0.12 |
2.08 |
0.90% |
| Entropy Collapse |
Critical Pt. |
256D |
128D |
N/A |
5. Discussion
The spin alignment mechanism acts as a robust stabilizer for local manifolds. Unlike traditional reduction methods, where points may scatter independently, our Hamiltonian formulation forces features to align toward a collective ground state. The primary finding is the existence of a Topological Solid Phase, characterized by low local variance (below 4 %) despite high mean rank drift. This indicates that the technique effectively suppresses manifold tearing. This characteristic makes the technique uniquely suited for practical applications like community detection, where maintaining the relative pack identity is more critical than preserving exact absolute coordinates.
6. Conclusions
The spin alignment mechanism acts as a robust stabilizer for local manifolds. This framework functions as a precise ordinal compressor at low reduction levels and transitions into a resilient topological clustering engine at high ratios [
1,
2]. Performance metrics show minimal variance delta (typically < 6%) between different sample scales, confirming the stability of the Hamiltonian solver.
References
- van der Maaten, L.; Hinton, G. Visualizing Data using t-SNE. Journal of Machine Learning Research 2008, 9, 2579–2605. [Google Scholar]
- McInnes, L.; Healy, J.; Saul, N.; Großberger, L. UMAP: Uniform Manifold Approximation and Projection. Journal of Open Source Software 2018, 3(29), 861. [Google Scholar] [CrossRef]
- Havlícek, V.; et al. Supervised learning with quantum-enhanced feature spaces; Nature, 2019; Volume 567, pp. 209–212. [Google Scholar]
- Ising, E. Beitrag zur Theorie des Ferromagnetismus. Zeitschrift für Physik 1925, 31, 253–258. [Google Scholar] [CrossRef]
- Tenenbaum, J.B.; De Silva, V.; Langford, J.C. A global geometric framework for nonlinear dimensionality reduction. Science 2000, 290(5500), 2319–2323. [Google Scholar] [CrossRef] [PubMed]
- Belkin, M.; Niyogi, P. Laplacian Eigenmaps for Dimensionality Reduction and Data Representation. Neural Computation 2003, 15(6), 1373–1396. [Google Scholar] [CrossRef]
- Bronstein, M.M.; et al. Geometric deep learning: going beyond Euclidean data. IEEE Signal Processing Magazine 2017, 34(4), 18–42. [Google Scholar] [CrossRef]
- Schuld, M.; Killoran, N. Quantum Machine Learning in Feature Hilbert Spaces. Physical Review Letters 2019, 122(4), 040504. [Google Scholar] [CrossRef] [PubMed]
- Vaswani, A.; et al. Attention Is All You Need. Advances in Neural Information Processing Systems 2017, 30. [Google Scholar]
- Kullback, S.; Leibler, R.A. On Information and Sufficiency. The Annals of Mathematical Statistics 1951, 22(1), 79–86. [Google Scholar] [CrossRef]
- Coifman, R.R.; Lafon, S. Diffusion maps. Applied and Computational Harmonic Analysis 2006, 21(1), 5–30. [Google Scholar] [CrossRef]
- Sachdev, S. Quantum Phase Transitions; Cambridge University Press, 2011. [Google Scholar]
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