Submitted:
31 August 2025
Posted:
03 September 2025
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Abstract
Keywords:
1. Introduction
1.1. Overview of Healthcare and Drug Development
1.2. Importance of Innovative Methods in Drug Discovery and Development
1.3. Current Challenges in Pharmaceutical Synthesis
1.4. Role of Catalysis in Pharmaceutical Synthesis
1.5. Trinuclear Metal Carbonyl Clusters and Their Symmetrical Properties
1.6. Symmetry in Chemical Catalysis
1.7. Metal Catalyzed C-H Activation and Its Applications
1.8. C-H Activation in Drug Synthesis
1.9. Role of Osmium in Catalytic C–H Activation
1.10. Objective of the Study
2. Literature Review
3. Materials and Methods
3.1. General Details
3.2. Synthetic Procedures
3.2.1. Synthesis of Trinuclear Metal Carbonyl Clusters
- A mixture of Os3(CO)12 (100 mg, 0.11 mmol) and trimethylamine N-oxide (25 mg, 0.33 mmol) was dissolved in 50 mL of methylene chloride in a 100 mL three-neck flask.
- The reaction mixture was stirred at room temperature for 2 hours under a nitrogen atmosphere.
- After completion of the reaction, as indicated by IR spectroscopy, the solvent was removed under reduced pressure.
- The resulting product, Os3(CO)10(NCCH3)2, was purified by column chromatography using a mixture of hexane and methylene chloride (3:1) as the eluent.
3.2.2. Experimental Procedures
3.2.3. General Procedure for C-H Activation
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was added to a 100 mL three-neck flask containing 60 mL of solvent (heptane or methylene chloride).
- N,N-dimethylacrylamide (DMA) or methyl acrylate (MA) was added to the reaction mixture in a molar ratio of 1:5 or 1:2 with respect to the osmium complex.
- The reaction mixture was heated to reflux with stirring for the specified time (7-12 hours) under a nitrogen atmosphere.
- The progress of the reaction was monitored by IR spectroscopy.
- Upon completion, the solvent was removed under reduced pressure, and the products were isolated by thin-layer chromatography (TLC) using a mixture of hexane and methylene chloride (3:1 or 1:1) as the eluent.
3.2.4. Synthesis of Specific Activated Compounds
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Synthesis of Os2(CO)6(µ-H)(µ-O=C(N(CH3)2)CHCH), 1:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (42.5 mg, 0.428 mmol) in 60 mL of heptane for 7 hours.
- The product was isolated by TLC, yielding 13.1 mg (16.3%) of yellow Os2(CO)6(µ-H)(µ-O=C(N(CH3)2)CHCH).
- Solvent use rationale: Heptane is non-polar and non-coordinating with a higher b.p. (98 C), enabling hot reflux to drive C–H activation while avoiding competitive solvent binding to osmium.
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Synthesis of Os4(CO)12(µ-O=C(N(CH3)2)CHCH)2, 2:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (144.3 mg, 1.45 mmol) in 60 mL of methylene chloride for 12 hours.
- The product was isolated by TLC, yielding 12.3 mg (15.4%) of Os4(CO)12(µ-O=C(N(CH3)2)CHCH)2.
- Solvent use rationale: Methylene chloride (CH2Cl2) is moderately polar and weakly coordinating with excellent solubility for Os carbonyl clusters; its low b.p. (40C) allows gentle rt/reflux conditions that control reactivity and limit over-decarbonylation.
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Synthesis of Os3(CO)9(µ-O=C(N(CH3)2)CH2CHCCHC(N(CH3)2)=O), 3:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (42.5 mg, 0.428 mmol) in 60 mL of heptane for 7 hours.
- The product was isolated by TLC, yielding 23.0 mg (28.8%) of yellow Os3(CO)9(µ-O=C(N(CH3)2)CH2CHCCHC(N(CH3)2)=O).
- Solvent use rationale: Heptane is non-polar and non-coordinating with a higher b.p. (98C), enabling hot reflux to drive C–H activation while avoiding competitive solvent binding to osmium.
-
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Synthesis of Os3(CO)8(µ-O=C(N(CH3)2)CHCH)2, 4:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (144.3 mg, 1.45 mmol) in 60 mL of methylene chloride for 12 hours.
- The product was isolated by TLC, yielding 5.0 mg (6.2%) of yellow Os3(CO)8(µ-O=C(N(CH3)2) CHCH)2.
- Solvent use rationale: Methylene chloride (CH2Cl2) is moderately polar and weakly coordinating with excellent solubility for Os carbonyl clusters; its low b.p. (40C) allows gentle rt/reflux conditions that control reactivity and limit over-decarbonylation.
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Synthesis of Os6(CO)20(µ-H)(µ-O=C(N(CH3)2)CHCH)2, 5:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (144.3 mg, 1.45 mmol) in 60 mL of methylene chloride for 12 hours.
- The product was isolated by TLC, yielding 18.2 mg (22.5%) of Os6(CO)20(µ-H)(µ-O=C(N(CH3)2) CHCH)2.
- Solvent use rationale: Methylene chloride (CH2Cl2) is moderately polar and weakly coordinating with excellent solubility for Os carbonyl clusters; its low b.p. (40C) allows gentle rt/reflux conditions that control reactivity and limit over-decarbonylation.
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Synthesis of HOs3(CO)10(µ-O=C(N(CH3)2)CHCH), 6:
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Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was reacted withN,N-dimethylacrylamide (DMA) (192.4 mg, 1.94 mmol) in 30 mL of methylene chloride at room temperature for 2 hours.
- The product was isolated by TLC, yielding 55.8 mg (69.1%) of yellow HOs3(CO)10(µ-O=C(N(CH3)2)CHCH).
- Solvent use rationale: Methylene chloride (CH2Cl2) is moderately polar and weakly coordinating with excellent solubility for Os carbonyl clusters; its low b.p. (40C) allows gentle rt/reflux conditions that control reactivity and limit over-decarbonylation.
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Synthesis of Os5(CO)15(µ-O=C(N(CH3)2)CHCH)2, 7:
- HOs3(CO)10(µ-O=C(N(CH3)2)CHCH), 6 (30 mg, 0.032 mmol) was added to a NMR tube containing a solution of trimethylamine N-oxide (4.0 mg, 0.04 mmol) in 3 mL d-methylene chloride.
- The reaction mixture was placed in an oil bath at 45C for 7 days with intermittent monitoring by NMR spectroscopy.
- The solvent was then removed by evaporation at room temperature, and the product was isolated by TLC using a mixture of hexane and methylene chloride (1:1) as the eluent.
- In order of elution, the products were: 3.0 mg of yellow Os3(CO)12 (10.34% yield), 5 mg of Os2(CO)6(µ-H)(µ-O=C(N(CH3)2)CHCH), 1 (24.13% yield), and 10.2 mg of Os5(CO)15(µ-O=C(N(CH3)2)CHCH)2 (20.71% yield).
- Solvent use rationale:d-Methylene chloride (CD2Cl2) is the deuterated analogue chosen for in-tube NMR monitoring over days, providing the same solvation as CH2Cl2 with minimal background signals.
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Synthesis of Os3(CO)9(µ-H)(µ-O=C(OCH3)CHCH), 8:
- Os3(CO)10(NCCH3)2 (80 mg, 0.085 mmol) was added to a 100 mL three-neck flask containing a solution of methyl acrylate (CH3OCOCHCH2) (36.91 mg, 0.42 mmol) in 60 mL hexane.
- The reaction mixture was allowed to stir at reflux for 3 hours with intermittent monitoring by IR spectroscopy.
- The solvent was then removed in vacuo, and the product was isolated by TLC using a mixture of hexane and methylene chloride (3:1) as the eluent.
-
In order of elution, the products were: 5.0 mg of yellow known compound Os3(CO)11(µ-H)(µ-Cl) (6.25% yield), 6.1 mg of yellow known compoundOs3(CO)12(µ-H)(µ-OH) (7.63% yield), and 23 mg of yellow Os3(CO)9(µ-H)(µ-O=C(OCH3)CHCH) (28.75% yield).
- Solvent use rationale: Hexane is non-polar and non-coordinating with a moderate b.p. (69C), supporting clean reflux with methyl acrylate while avoiding donor interference at the metal center.

4. Results
4.1. Mechanistic Pathways and Transformations

5. Discussion
5.1. Transition Metal Catalysis in Drug Development: Overview and Examples
5.2. Cross-Coupling Reactions and Assembly of Drug Scaffolds
5.3. C–H Activation and Late-Stage Functionalization
5.4. Asymmetric and Specialized Catalysis in API Synthesis
5.5. Symmetrical Multimetal Catalysis: Cooperative Mechanisms and Pharmaceutical Potential
5.6. Cooperative C–H and C–C Activation by Bimetallic Systems
5.7. Symmetry, Catalyst Design, and Selectivity
5.8. Flow Chemistry, Green Processes, and Raw Material Efficiency
5.9. Conclusion: Bridging Cluster Chemistry to Drug Synthesis
6. Conclusion
- Late-stage functionalization of amide scaffolds. Site-specific -C–H activation on an acrylamide bound to a multinuclear site suggests a route to regiocontrolled installation of handles (C–C, C–O, C–N) on drug-like amides without prefunctionalization.
- Symmetric C–C coupling of feedstocks. The dimerization and multi-bridging motifs (2, 3, 4, 7) are prototypes for coupling identical / units into conjugated or 1,4-dicarbonyl-like frameworks that frequently seed heterocycles and pharmacophores.
- Integration of CO as a one-carbon synthon. Readily observed CO migration/expulsion across the series highlights that carbonylation steps can be embedded within a single multinuclear coordination sphere—an attractive blueprint for compacting step counts in API routes.
- Process alignment. The tolerance of amide and ester functions, together with solvent-dependent selectivity, speaks to tunability crucial for flow chemistry and green metrics (atom economy, minimized protecting groups) emphasized in industrial manufacture.
- From stoichiometry to catalysis. Design turnover-capable bimetal/trimetal catalysts that mimic 6 as a resting state and cycle through the -C–H activation/C–C coupling motifs seen in 1–5,7–8. Metrics: TON/TOF, mass balance, and robustness screens in the presence of amide/ester functionality.
- Scope on drug-like substrates. Probe directed and undirected -C–H activation on acrylamide/enoamide fragments embedded in representative small-molecule intermediates; map substituent, electronics, and steric effects that control regioselectivity.
- Mechanistic quantification. Combine variable-temperature NMR (hydride exchange/EXSY), isotopic labeling (KIE for -C–H cleavage), and computation to distinguish CMD-like versus stepwise pathways across Os–Os edges; correlate with electron counts and symmetry elements observed crystallographically.
- Translational engineering. (i) Port the cooperative blueprint to congeners (Ru, Rh) and supported/heterogenized analogues for improved practicality; (ii) evaluate continuous-flow operation where solvent choice already modulates selectivity; (iii) embed carbonylation events to deliver carboxyl/ketone motifs in situ from CO, minimizing step count.
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| FT-IR | Fourier Transform Infrared Spectroscopy |
| NMR | Nuclear Magnetic Resonance |
| MS | Mass Spectrometry |
| DMA | N,N-Dimethylacrylamide |
| MA | Methyl Acrylate |
| QTAIM | Quantum Theory of Atoms in Molecules |
| Q-TOF | Quadrupole Time-of-Flight |
| TMS | Tetramethylsilane |
| Cp* | Pentamethylcyclopentadienyl |
| EI | Electron Impact |
| ESI | Electrospray Ionization |
| GOF | Goodness of Fit |
| ORTEP | Oak Ridge Thermal Ellipsoid Plot |
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| Drug (or Class) | Catalytic Transformation | Catalyst (Metal) |
|---|---|---|
| Varenicline (Chantix®, smoking cessation) | Dihydroxylation of a strained alkene to form a vicinal diol intermediate (Upjohn/Sharpless conditions) | OsO4 (with chiral ligand and NMO oxidant) |
| Ibrutinib (BTK inhibitor, covalent anticancer) | Acrylamide “warhead” installation via hydroaminocarbonylation of acetylene (one-step acrylamide formation) | Pd catalyst (phosphine ligand; CO + C2H2 gases) |
| Merck carbapenem (beta-lactam antibiotic candidate) | Aryl–alkenyl bond formation (Suzuki cross-coupling to assemble -lactam core) | Pd(0) (e.g. Pd(PPh3)4) |
| Anticancer natural product (Discodermolide) | Fragment coupling in polyketide assembly (Suzuki coupling of vinyl-boronate and aryl bromide) | Pd(0) with trialkylphosphine |
| Oseltamivir (Tamiflu®, antiviral) | Heterocycle diversification via late-stage hydroaminocarbonylation (introduction of acrylamide moiety) | Pd(II) (similar conditions as above) |
| Various covalent drugs (e.g. osimertinib, zanubrutinib, sotorasib) | Formation of acrylamide or alkene electrophile units (for covalent binding to protein residues) | Pd or Ni catalysis (e.g. Heck coupling or carbonylation) |
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