1. Introduction
The tuna industry holds great global significance, providing substantial employment opportunities and making significant contributions to the global economy [
1]. Global catches of tunas and related species (including
Thunnus albacares,
Thunnus maccoyii,
Thunnus obesus,
Thunnus thynnus,
Thunnus alalunga, and
Katsuwonus pelamis) reached a volume of 7.8 million tons in 2020 [
2]. The industrial processing of tuna generates a substantial quantity of solid waste, including muscle trimmings, viscera, gills, dark muscle, heads, tails, bones, skins, and fins, which constitutes up to 70% of the initial raw material [
3]. Although these by-products are useful in the production of fertilizers or fishmeal/fish oil for aquaculture fish feed or pet food, there is untapped potential to create higher value products due to their protein-rich composition, thereby enhancing the economic sustainability of this industry [
4]. However, it is a stark reality persists that significant quantities of these by-products are discarded, resulting in considerable environmental damage [
5]. Consequently, there is an urgent need to develop strategies for the valorization of these by-products, with a primary focus on generating of high-value products. One interesting approach involves converting protein-rich by-products into protein hydrolysates with bioactive and nutritional characteristics. Alternatively, collagen/gelatin can be extracted from the skin for various purposes [
6,
7,
8], and represents a good alternative to mammalian gelatin. It can be utilized as a food ingredient as an emulsifier, for the production of edible films, or even for the development of functional foods [
9,
10].
The utilization of protein-rich by-products as a substrate for protease production is of great interest, due to the abundance and underutilization of these resources. It has been demonstrated that several microorganisms are able to utilize these by-products as a source of carbon, nitrogen, and energy in the enzyme production process, which has generated scientific and industrial interest. This interest is based on the fact that nearly 50% of the cost associated with enzyme production is attributed to the raw material, namely the substrate for the growth of enzyme-producing microorganisms [
11]. Microorganisms secrete proteolytic enzymes into the culture medium during the growth phase, which have excellent properties for application in hydrolysis processes [
12]. This strategic approach presents a promising avenue for the efficient production of proteolytic enzymes with industrial relevance, leveraging economically accessible resources and contributing to the valorization of by-products [
13]. Proteases of microbial origin offer distinct advantages over those of plant and animal origin, including ease of large-scale production, rapid growth, and lower production costs, among others [
14].
Bioactive peptides are present within the sequence of native proteins and must be released by hydrolysis to exert their biological functions. Among the array of hydrolysis methods available, utilizing proteases from animal, plant, or microbial sources is feasible. However, the use of the latest is preferable due to their rapid reaction and enhanced stability [
15]. In comparison to chemical hydrolysis, enzymatic hydrolysis offers several advantages. These include the preservation of the nutritional value, the absence of residual organic or chemical solvents, and its rapid, safe, and easily regulated nature [
16,
17].
Protein hydrolysates consist of free amino acids and peptides with varying molecular weights, which exhibit distinct technological and functional properties. Due to their smaller size, the constituent amino acids are more easily absorbed in the small intestine, fulfilling diverse physiological functions in the human body [
18]. Peptides offer a range of health benefits, including the potential treatment of certain diseases. They may also possess specific activities of technological interest, such as antioxidant and antimicrobial properties [
19].
Oxidative reactions represent a primary cause of food spoilage, resulting in the formation of free radicals and compounds that can cause chronic diseases by damaging cell membranes and biomacromolecules. These diseases include diabetes mellitus, cancer, and liver disease [
20]. In recent years, there has been a trend towards utilizing additives of natural origin. As a result, marine sources have garnered attention for the extraction of antioxidant peptides. For instance, the muscle of the Corvina fish (
Miichthys miiuy) has been hydrolyzed using different enzymes (alcalase, trypsin, papain and pepsin), resulting in the release of 10 peptides with strong antioxidant activity [
18]. The viscera of tilapia (
Oreochromis spp) have also been employed as a source of antioxidant peptides, with positive results [
21]. Furthermore, carp skins have been tested as a raw material for the release of antioxidant peptides by hydrolysis with alcalase [
22]. In practical applications, antioxidant peptides have demonstrated effectiveness in various contexts. For instance, they have shown promising results in reducing lipid oxidation in meat [
23]. Additionally, incorporating antioxidant peptides into the formulation of flour for biscuit production has led to notable improvements in both the nutritional value and antioxidant capacity of the final product [
24].
The primary objective of this study is to valorize yellowfin tuna (Thunnus albacares) tails through an integrated approach involving the separate exploitation of different components of the by-product. Initially, the muscle protein was evaluated as a nitrogen source for the production of proteases by B. subtilis. These proteases were then used to release antioxidant peptides from gelatin extracted from the skin. The evaluation of gelatin quality and the optimization of hydrolysis conditions with the objective to maximize antioxidant activity represent additional objectives of this study.
2. Materials and Methods
2.1. Sample Collection and Preparation
The tails of yellowfin tuna (Thunnus albacares) were obtained from a local market in Quito, Ecuador. The tails were carefully selected to ensure freshness and promptly transported on ice to the laboratory for further processing. To separate the muscle tissue from the skin, six tails were placed into a specially designed perforated stainless-steel cylinder. This cylinder allowed liquid to pass through while retaining solid components, achieved through low pressure magnified by fluid pressure effects. Hydraulic pressure was applied to the tails using a Sematech Engineering press (Quito, Ecuador), reaching pressures of up to 6,000 pounds per square inch (PSI). This method effectively extracted the desired muscle tissue, leaving the skin inside the cylinder. The extracted muscle was subsequently freeze-dried, minced, and stored at -80°C until further use.
2.2. Chemicals and Reagents
All experimental procedures were conducted using analytical-grade reagents, including potassium phosphate monobasic and dibasic, sodium chloride, Tris-HCl, and trichloroacetic acid, obtained from Thermo Fisher Scientific (Waltham, MA, USA). Additionally, BHI-Agar, dextrose, azocasein, SDS, TEMED, Tricine, Sephadex G-100, and Sephadex G-25 resin were obtained from Sigma Aldrich (St. Louis, MO, USA), while ammonium sulfate, 2-Mercaptoethanol, glycerol, sodium hydroxide, and BHI broth were purchased from Merck KGaA (Darmstadt, Germany). Ammonium persulfate, Bromophenol brilliant blue, Coomassie Brilliant Blue, acrylamide, and bisacrylamide were obtained from Bio-Rad (Hercules, CA, USA).
2.3. Enzymatic Extract Preparation
The enzymatic extract was obtained by cultivation of Bacillus subtilis in a culture medium prepared with 0.5% sodium chloride, 0.2 % dextrose and 1% freeze-dried yellowfin tuna muscle. The components were dissolved in 0.1 M phosphate buffer (pH 7) and then sterilized (121 ºC, 15 min) in a Trident EA-632 autoclave (Taiwan). The strain of Bacillus subtilis was isolated and identified in a previous study [
25]. Bacillus subtilis strain stored at -80 °C in BHI broth was thawed under refrigeration. Then, 100 µl of bacteria were inoculated into BHI broth and incubated at 37 °C for 24 hours. It was then inoculated into the broth prepared with yellowfin tuna muscle and incubated for 3 days at 37 °C under aerobic conditions with continuous shaking at 180 rpm. After the incubation period, the enzyme extract was obtained by precipitation with ammonium sulfate. For this, the fermented culture medium was mixed with ammonium sulfate at a concentration of 40% (w/v) and stirred continuously on ice for 1 hour. The mixture was then centrifuged at 5,500 x g for 15 minutes at 25°C to separate the precipitate (containing the enzymes) from the supernatant (containing the bacterial cells).
2.4. Purification of the Enzymatic Extract
The enzymatic extract obtained after precipitation was desalted using a pre-hydrated Sephadex G-25 gel filtration column [
26], pre-equilibrated in 0.1 M phosphate buffer. The enzymatic extract was then purified using a column packed with Sephadex G-100 resin (7.5 mm diameter, 10 cm height), previously hydrated in 0.1 M phosphate buffer at pH 7 for 24 hours. [
27]. During this process, 15 fractions of 1 ml each were collected under a constant flow of 0.1M phosphate buffer, at pH 7.
2.5. Determination of Proteolytic Activity of Alkaline Proteases:
The proteolytic activity of the collected samples was determined using azocasein as a substrate [
28]. For that, a reaction mixture was prepared by mixing 200 µL of Tris-HCl buffer (0.1 M, pH 8), 200 µL of the extract, and 200 µL of 1% (w/v) azocasein. A blank solution was prepared by combining 200 µL of 1% azocasein, 1 mL of 10% trichloroacetic acid (TCA), 200 µL of Tris-HCl buffer, and 200 µL of distilled water. The reaction mixture was then incubated at 37°C for 30 minutes. Then, 1 mL of TCA solution was added, followed by centrifugation at 5,500 x g for 15 minutes. After centrifugation, 400 µL of 1.8 N NaOH was added to the supernatant. The absorbance of the resulting solution was measured at a wavelength of 420 nm using a UV/Vis spectrophotometer (UV-160A, Shimadzu, Kyoto, Japan)
Under the specified measurement conditions, one unit of proteolytic activity (U) was defined as the amount of enzymatic extract (mL) that resulted in a 0.1 increase in absorbance per minute. Azocaseinolytic activity was quantified by expressing the proteolytic activity in units per milliliter (U/mL).
The fraction containing the enzymes was supplemented with 1% glycerol to improve stability and then freeze-dried to obtain a stable form.
2.6. Molecular Sizes Determination
The fraction containing the enzymes was subjected to a polyacrylamide gel electrophoresis analysis [
29], using 10% acrylamide gels prepared from a 49.5%T, 3%C acrylamide-bisacrylamide mixture (T denotes the total percentage concentration of both monomers (acrylamide and bisacrylamide) and C denotes the percentage concentration of the cross-linking agent relative to the total concentration of T). A constant voltage of 110 V was used to run the samples. To prepare the sample, 20 mg of lyophilized samples were dissolved in 1 mL of a denaturing solution (50 mM Tris, 4% SDS, 2% mercaptoethanol, 12% glycerol, and 0.01% bromophenol blue) adjusted to pH 6.8 with 1 N HCl. The solution was boiled for 10 minutes and then centrifuged at 10,000 x g. The protein bands were subsequently stained with Coomassie blue. A molecular weight marker ranging from 6.5 to 200 kDa (SigmaMarker S8445-10VL) was used to determine the tentative molecular weight of the proteins in the stained bands.
2.7. Gelatin Extraction from Yellowfin Tuna:
Firstly, the skins were washed with two volumes of a 5% NaCl solution for 30 minutes to remove any non-collagenous adhered proteins. The process was repeated twice. Subsequently, the skins were immersed in 0.1N NaOH solution for one hour to eliminate any remaining lipids. To ensure complete lipid removal, the samples were afterwards treated thrice with two volumes of 10% isobutyl alcohol for 30 minutes. Finally, the samples were thoroughly washed with distilled water and treated with 0.05 M acetic acid for 21 hours at room temperature. The final extraction of gelatin was performed twice with distilled water at 60°C overnight. The extracts were filtered using gauze, then dried in a forced-air oven at 45°C for 12 hours. The gelatin was finally ground into a fine powder and stored at -20°C until use [
30].
2.8. Amino Acid Analysis
Gelatin was dissolved (1 mg/mL) in ultrapure water and further hydrolyzed in vacuum-sealed glass at 110 °C for 24 h in presence of continuously boiling 6 N HCl containing 0.1% phenol and norleucine as internal standard. After hydrolysis, the sample was again vacuum-dried, dissolved in application buffer, and injected onto a Biochrom 30 amino acid analyser (Biochrom Ltd., Cambridge, UK) equipped with a LKB Ultropack 8 resin column (Pharmacia LKB Biotechnology, Inc. Pascataway, NJ, USA). Results were expressed as grams of amino acids per 100 grams.
2.9. Gel-Forming Properties
Gelatin (6.67 g/100 mL) was dissolved in distilled water at 40ºC for 20 minutes. The viscoelastic properties of the gelatin were evaluated using a rotational rheometer (Advanced Rheometer AR 2000, TA Instruments Ltd, Newcastle, England) equipped with a 2° cone angle and a 40 mm plate distance. A dynamic temperature sweep was performed by subjecting the gelatin to a temperature sweep from 35 to 5°C and then returning it to 35°C. The sweep rate was 1°C per minute, with a frequency of 0.5 Hz, an initial stress of 3 Pa, and a deformation of 0.2 [
31].
The gelation and subsequent melting points of the gelatin were evaluated by analyzing the elastic modulus, viscous modulus, and phase angle as a function of temperature. To study the dynamic frequency sweep, the gelatin was maintained at 4°C, and oscillatory measurements were performed over a frequency range of 0.1 to 10 Hz, with an oscillation amplitude (strain) within the linear range (0.005). The elastic and viscous moduli were measured as a function of frequency, providing valuable insight into the mechanical properties of the gelatin under varying deformation rates.
2.10. Gel Strength
The gel strength of the gelatin extract was measured as described by Boran and Regenstein [
32] with some modifications, employing a Perten Instruments TVT 6700 texturometer (PerkinElmer Company, Sydney, Australia) equipped with a 40 mm diameter flag compression. Gelatin (6.67%) was dissolved in distilled water at 45°C, introduced into 100 mL containers measuring 60 mm in height and 50 mm in diameter and then cooled to 7°C over a period of 15 hours. Gel strength was measured at 7°C, as determined by the maximum force (in grams) required to penetrate 4 mm of gelatin with the plunger. Results were the average of at least five determinations [
31].
2.11. Optimization of Gelatin Hydrolysis Conditions
The optimization of gelatin hydrolysis to achieve the optimal degree of hydrolysis was performed using a response surface experimental design. This design included three temperature levels (50°C, 60°C, and 70°C) and three enzyme concentrations, expressed in enzymatic units per gram of dehydrated gelatin (1.5, 4, and 6.5). Two replicates were performed at the central point. For the optimization process, the degree of hydrolysis (DH) was chosen as the response variable. The hydrolysis reaction was initiated by dissolving one gram of dehydrated gelatin in 100 mL of distilled water and adjusting the pH of the mixture to 8. The previously obtained lyophilized enzyme extract was then added to the mixture [
33].
The degree of hydrolysis (DH) was evaluated by the pH-stat method [
34]. The amount of NaOH 0.1N consumed to maintain a pH value of 8 during the protein hydrolysis was recorded at fixed intervals throughout the hydrolysis process. An 848 Titrino plus complete titrator (Metrohm Inc., Tampa, FL) was used to maintain a constant pH and obtain the NaOH consumption data. Upon completion of the hydrolysis process, the enzyme was inactivated by heating at 95 ± 0.3°C for 10 minutes in a thermostatic bath followed by cooling it to room temperature [
35]. Results were expressed as the percentage of cleaved peptides (h) relative to the total number of peptide bonds available for proteolysis as a percentage (Eq 1):
Where, VNaOH is the volume of NaOH consumed (mL). Nb is the Normality of the base. MP is the protein mass (g). ℎtotal is the total number of peptide bonds in gelatin (10.82 mEq/ g protein) and ∝ is the dissociation degree of the ∝NH2 groups released during the hydrolysis.
The hydrolysate was freeze-dried and stored at -20°C until use.
2.12. Determionation of Protein Content
The Kjeldahl method (AOAC, 2005) [
36] was used to determine the nitrogen content using the conversion factor of 5.55 for nitrogen-to-protein. The results were expressed as g/100g dried sample.
2.13. DPPH Radical Scavenging Activity
The antioxidant activity of the gelatin hydrolysates was determined according to Mosquera, Gómez, Montero and Giménez (2016) [
19]. A solution was prepared by dissolving 3.5 mg of DPPH+ (1,1-diphenyl-2-picrylhydrazyl) in 10 mL of methanol. The solution was then diluted with more methanol until the absorbance at 515 nm was 1 ± 0.009. Next, 1.95 mL of the diluted DPPH+ solution was mixed with 0.05 mL of the hydrolysate (previously diluted to 0.06 g/mL with distilled water). The resulting mixture was stirred and allowed to stand for 30 minutes at room temperature. After centrifugation at 6,000 x g for 10 minutes, the absorbance of the supernatant was measured at 515 nm using a spectrophotometer (UV-160A, Shimadzu, Kyoto, Japan). The results were expressed as percentages.