Preprint Article Version 1 Preserved in Portico This version is not peer-reviewed

Ligand and Structure-Based Virtual Screening in Combination, to Evaluate Small Organic Molecules as Inhibitors for the XIAP Anti-apoptotic Protein: The Xanthohumol Hypothesis

Version 1 : Received: 8 June 2022 / Approved: 9 June 2022 / Online: 9 June 2022 (11:08:29 CEST)

How to cite: Mavra, A.; Petrou, C.; Vlasiou, M.C. Ligand and Structure-Based Virtual Screening in Combination, to Evaluate Small Organic Molecules as Inhibitors for the XIAP Anti-apoptotic Protein: The Xanthohumol Hypothesis. Preprints 2022, 2022060144. https://doi.org/10.20944/preprints202206.0144.v1 Mavra, A.; Petrou, C.; Vlasiou, M.C. Ligand and Structure-Based Virtual Screening in Combination, to Evaluate Small Organic Molecules as Inhibitors for the XIAP Anti-apoptotic Protein: The Xanthohumol Hypothesis. Preprints 2022, 2022060144. https://doi.org/10.20944/preprints202206.0144.v1

Abstract

Herein, we are proposing two chalcone molecules, (E)-1-(4-methoxyphenyl)-3-(p-tolyl) prop-2-en-1-one and (E)-3-(4-hydroxyphenyl)-1-(2,4,6-trihydroxyphenyl) prop-2-en-1-one, based on the anticancer bioactive molecule Xanthohumol, which are suitable for further in vitro and in vivo studies. Their ability to create stable complexes with the antiapoptotic X-linked IAP (XIAP) protein makes them promising anticancer agents. The calculations were based on ligand-based and structure-based virtual screening combined for the pharmacophore built. Additionally, the structures passed Lipinski's rule for drug use, and their reactivity was confirmed using density functional theory studies. The candidates were chosen between 10639400 compounds, and the docking protocols were evaluated using molecular dynamics simulations.

Keywords

Molecular docking; molecular dynamics; pharmacophore; molecular modeling; XIAP protein; protein inhibitor; anticancer activity

Subject

Chemistry and Materials Science, Medicinal Chemistry

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