Preprint Article Version 1 Preserved in Portico This version is not peer-reviewed

Tensor Rules in the Stochastic Organization of Genomes and Genetic Stochastic Resonance in Algebraic Biology

Version 1 : Received: 1 October 2021 / Approved: 5 October 2021 / Online: 5 October 2021 (16:25:34 CEST)

How to cite: Petoukhov, S.V. Tensor Rules in the Stochastic Organization of Genomes and Genetic Stochastic Resonance in Algebraic Biology. Preprints 2021, 2021100093. https://doi.org/10.20944/preprints202110.0093.v1 Petoukhov, S.V. Tensor Rules in the Stochastic Organization of Genomes and Genetic Stochastic Resonance in Algebraic Biology. Preprints 2021, 2021100093. https://doi.org/10.20944/preprints202110.0093.v1

Abstract

The article is devoted to the new results of the author, which add his previously published ones, of studying hidden rules and symmetries in structures of long single-stranded DNA sequences in eukaryotic and prokaryotic genomes. The author uses the existence of different alphabets of n-plets in DNA: the alphabet of 4 nucleotides, the alphabet of 16 douplets, the alphabet of 64 triplets, etc. Each of such DNA alphabets of n-plets can serve for constructing a text as a chain of these n-plets. Using this possibility, the author represents any long DNA nucleotide sequence as a bunch of many so-called n-texts, each of which is written on the basis of one of these alphabets of n-plets. Each of such n-texts has its individual percents of different n-plets in its genomic DNA. But it turns out that in such multi-alphabetical or multilayer presentation of each of many genomic DNA, analyzed by the author, universal rules of probabilities and symmetry exist in interrelations of its different n-texts regarding their percents of n-plets. In this study, the tensor product of matrices and vectors is used as an effective analytical tool borrowed from the arsenal of quantum mechanics. Some additions to the topic of algebra-holographic principles in genetics are also presented. Taking into account the described genomic rules of probability, the author puts also forward a concept of the important role of stochastic resonances in genetic informatics.

Keywords

genome, DNA, alphabet, matrices, tensor product, quantum informatics, stochastic resonance.

Subject

Biology and Life Sciences, Biochemistry and Molecular Biology

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