Submitted:
07 November 2025
Posted:
10 November 2025
You are already at the latest version
Abstract

Keywords:
1. Introduction
2. Materials and Methods
2.1. Ethical Statement
2.2. Animals and Study Groups
2.4. Extraction and Purification of Total DNA from Feces
2.5. High-Throughput Sequencing of Bacterial 16S rRNA Gene
2.6. Bioinformatics Analysis
2.6. Western Blot and Antibody Array
2.7. Statistical Analysis
3. Results
3.1. Gut Microbiota
3.2. Effect of Lupus and Cinnamon on Microbial Diversity
3.3. Effect of Lupus and Cinnamon on Microbial Communities
3.4. KEGG Bioinformatic Analysis
3.5. Escherichia coli Protein Expression in Liver Tissue:
3.5. TLR-4, TLR-7 and NFκB in the Liver
3.6. Oxidative Stress and Apoptosis Markers in the Liver:
4. Discussion
5. Conclusions
Author Contributions
Funding
Informed Consent Statement
Acknowledgments
Conflicts of Interest
References
- Arnaud, L.; Chasset, F.; Martin, T. Immunopathogenesis of Systemic Lupus Erythematosus: An Update. Autoimmun Rev 2024, 23, 103648. [CrossRef]
- Maalouly, G.; Hajal, J.; Noujeim, C.; Choueiry, M.; Nassereddine, H.; Smayra, V.; Saliba, Y.; Fares, N. New Insights in Gut-Liver Axis in Wild-Type Murine Imiquimod-Induced Lupus. Lupus 2021, 30, 926–936. [CrossRef]
- Honda, K.; Littman, D.R. The Microbiome in Infectious Disease and Inflammation. Annu Rev Immunol 2012, 30, 759–795. [CrossRef]
- Manos, J. The Human Microbiome in Disease and Pathology. APMIS 2022, 130, 690–705. [CrossRef]
- Yao, K.; Xie, Y.; Wang, J.; Lin, Y.; Chen, X.; Zhou, T. Gut Microbiota: A Newly Identified Environmental Factor in Systemic Lupus Erythematosus. Front Immunol 2023, 14, 1202850. [CrossRef]
- Zhang, K.; Ji, J.; Li, N.; Yin, Z.; Fan, G. Integrated Metabolomics and Gut Microbiome Analysis Reveals the Efficacy of a Phytochemical Constituent in the Management of Ulcerative Colitis. Mol Nutr Food Res 2024, 68, e2200578. [CrossRef]
- Maalouly, G.; Martin, C.-M.-A.; Baz, Y.; Saliba, Y.; Baramili, A.-M.; Fares, N. Antioxidant and Anti-Apoptotic Neuroprotective Effects of Cinnamon in Imiquimod-Induced Lupus. Antioxidants (Basel) 2024, 13, 880. [CrossRef]
- Escudié, F.; Auer, L.; Bernard, M.; Mariadassou, M.; Cauquil, L.; Vidal, K.; Maman, S.; Hernandez-Raquet, G.; Combes, S.; Pascal, G. FROGS: Find, Rapidly, OTUs with Galaxy Solution. Bioinformatics 2018, 34, 1287–1294. [CrossRef]
- Gouy, M.; Guindon, S.; Gascuel, O. SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building. Mol Biol Evol 2010, 27, 221–224. [CrossRef]
- Guindon, S.; Dufayard, J.-F.; Lefort, V.; Anisimova, M.; Hordijk, W.; Gascuel, O. New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0. Syst Biol 2010, 59, 307–321. [CrossRef]
- Yokogawa, M.; Takaishi, M.; Nakajima, K.; Kamijima, R.; Fujimoto, C.; Kataoka, S.; Terada, Y.; Sano, S. Epicutaneous Application of Toll-like Receptor 7 Agonists Leads to Systemic Autoimmunity in Wild-Type Mice: A New Model of Systemic Lupus Erythematosus. Arthritis & Rheumatology (Hoboken, N.J.) 2014, 66, 694–706. [CrossRef]
- Maalouly, G.; Saliba, Y.; Hajal, J.; Zein-El-Din, A.; Fakhoury, L.; Najem, R.; Smayra, V.; Nassereddine, H.; Fares, N. Cinnamomum Cassia Alleviates Neuropsychiatric Lupus in a Murine Experimental Model. Nutrients 2025, 17, 1820. [CrossRef]
- Niazmand, S.; Mirzaei, M.; Hosseinian, S.; Khazdair, M.R.; Gowhari Shabgah, A.; Baghcheghi, Y.; Hedayati-Moghadam, M. The Effect of Cinnamomum Cassia Extract on Oxidative Stress in the Liver and Kidney of STZ-Induced Diabetic Rats. J Complement Integr Med 2022, 19, 311–321. [CrossRef]
- Lim, J.-O.; Kim, Y.H.; Lee, I.S.; Kim, W.-I.; Lee, S.-J.; Pak, S.-W.; Shin, I.-S.; Kim, T. Cinnamomum Cassia (L.) J.Presl Alleviates Allergic Responses in Asthmatic Mice via Suppression of MAPKs and MMP-9. Front Pharmacol 2022, 13, 906916. [CrossRef]
- Lagouge, M.; Argmann, C.; Gerhart-Hines, Z.; Meziane, H.; Lerin, C.; Daussin, F.; Messadeq, N.; Milne, J.; Lambert, P.; Elliott, P.; et al. Resveratrol Improves Mitochondrial Function and Protects against Metabolic Disease by Activating SIRT1 and PGC-1alpha. Cell 2006, 127, 1109–1122. [CrossRef]
- Shao, W.; Yu, Z.; Chiang, Y.; Yang, Y.; Chai, T.; Foltz, W.; Lu, H.; Fantus, I.G.; Jin, T. Curcumin Prevents High Fat Diet Induced Insulin Resistance and Obesity via Attenuating Lipogenesis in Liver and Inflammatory Pathway in Adipocytes. PLoS One 2012, 7, e28784. [CrossRef]
- Stojanov, S.; Berlec, A.; Štrukelj, B. The Influence of Probiotics on the Firmicutes/Bacteroidetes Ratio in the Treatment of Obesity and Inflammatory Bowel Disease. Microorganisms 2020, 8, 1715. [CrossRef]
- de la Visitación, N.; Robles-Vera, I.; Toral, M.; Gómez-Guzmán, M.; Sánchez, M.; Moleón, J.; González-Correa, C.; Martín-Morales, N.; O’Valle, F.; Jiménez, R.; et al. Gut Microbiota Contributes to the Development of Hypertension in a Genetic Mouse Model of Systemic Lupus Erythematosus. Br J Pharmacol 2021, 178, 3708–3729. [CrossRef]
- Robles-Vera, I.; Visitación, N.D.L.; Toral, M.; Sánchez, M.; Gómez-Guzmán, M.; O’valle, F.; Jiménez, R.; Duarte, J.; Romero, M. Toll-like Receptor 7-Driven Lupus Autoimmunity Induces Hypertension and Vascular Alterations in Mice. J Hypertens 2020, 38, 1322–1335. [CrossRef]
- Wang, H.; Wang, G.; Banerjee, N.; Liang, Y.; Du, X.; Boor, P.J.; Hoffman, K.L.; Khan, M.F. Aberrant Gut Microbiome Contributes to Intestinal Oxidative Stress, Barrier Dysfunction, Inflammation and Systemic Autoimmune Responses in MRL/Lpr Mice. Front Immunol 2021, 12, 651191. [CrossRef]
- He, Z.; Shao, T.; Li, H.; Xie, Z.; Wen, C. Alterations of the Gut Microbiome in Chinese Patients with Systemic Lupus Erythematosus. Gut Pathog 2016, 8, 64. [CrossRef]
- Toumi, E.; Goutorbe, B.; Plauzolles, A.; Bonnet, M.; Mezouar, S.; Militello, M.; Mege, J.-L.; Chiche, L.; Halfon, P. Gut Microbiota in Systemic Lupus Erythematosus Patients and Lupus Mouse Model: A Cross Species Comparative Analysis for Biomarker Discovery. Front Immunol 2022, 13, 943241. [CrossRef]
- Gerges, M.A.; Esmaeel, N.E.; Makram, W.K.; Sharaf, D.M.; Gebriel, M.G. Altered Profile of Fecal Microbiota in Newly Diagnosed Systemic Lupus Erythematosus Egyptian Patients. Int J Microbiol 2021, 2021, 9934533. [CrossRef]
- Widhani, A.; Djauzi, S.; Suyatna, F.D.; Dewi, B.E. Changes in Gut Microbiota and Systemic Inflammation after Synbiotic Supplementation in Patients with Systemic Lupus Erythematosus: A Randomized, Double-Blind, Placebo-Controlled Trial. Cells 2022, 11, 3419. [CrossRef]
- Zhang, H.; Liao, X.; Sparks, J.B.; Luo, X.M. Dynamics of Gut Microbiota in Autoimmune Lupus. Appl Environ Microbiol 2014, 80, 7551–7560. [CrossRef]
- De Giani, A.; Pagliari, S.; Zampolli, J.; Forcella, M.; Fusi, P.; Bruni, I.; Campone, L.; Di Gennaro, P. Characterization of the Biological Activities of a New Polyphenol-Rich Extract from Cinnamon Bark on a Probiotic Consortium and Its Action after Enzymatic and Microbial Fermentation on Colorectal Cell Lines. Foods 2022, 11, 3202. [CrossRef]
- Sánchez-Maldonado, A.F.; Schieber, A.; Gänzle, M.G. Structure-Function Relationships of the Antibacterial Activity of Phenolic Acids and Their Metabolism by Lactic Acid Bacteria. J Appl Microbiol 2011, 111, 1176–1184. [CrossRef]
- Wang, W.; Fan, Y.; Wang, X. Lactobacillus: Friend or Foe for Systemic Lupus Erythematosus? Front Immunol 2022, 13, 883747. [CrossRef]
- Kim, M.S.; Kim, J.Y. Cinnamon Subcritical Water Extract Attenuates Intestinal Inflammation and Enhances Intestinal Tight Junction in a Caco-2 and RAW264.7 Co-Culture Model. Food Funct 2019, 10, 4350–4360. [CrossRef]
- Qi, L.; Mao, H.; Lu, X.; Shi, T.; Wang, J. Cinnamaldehyde Promotes the Intestinal Barrier Functions and Reshapes Gut Microbiome in Early Weaned Rats. Front Nutr 2021, 8, 748503. [CrossRef]
- Zheng, J.; Wittouck, S.; Salvetti, E.; Franz, C.M.A.P.; Harris, H.M.B.; Mattarelli, P.; O’Toole, P.W.; Pot, B.; Vandamme, P.; Walter, J.; et al. A Taxonomic Note on the Genus Lactobacillus: Description of 23 Novel Genera, Emended Description of the Genus Lactobacillus Beijerinck 1901, and Union of Lactobacillaceae and Leuconostocaceae. Int J Syst Evol Microbiol 2020, 70, 2782–2858. [CrossRef]
- Luo, Z.; Chen, A.; Xie, A.; Liu, X.; Jiang, S.; Yu, R. Limosilactobacillus Reuteri in Immunomodulation: Molecular Mechanisms and Potential Applications. Front Immunol 2023, 14, 1228754. [CrossRef]
- Hsu, T.-C.; Huang, C.-Y.; Liu, C.-H.; Hsu, K.-C.; Chen, Y.-H.; Tzang, B.-S. Lactobacillus Paracasei GMNL-32, Lactobacillus Reuteri GMNL-89 and L. Reuteri GMNL-263 Ameliorate Hepatic Injuries in Lupus-Prone Mice. Br. J. Nutr. 2017, 117, 1066–1074. [CrossRef]
- Manirarora, J.N.; Kosiewicz, M.M.; Alard, P. Feeding Lactobacilli Impacts Lupus Progression in (NZBxNZW)F1 Lupus-Prone Mice by Enhancing Immunoregulation. Autoimmunity 2020, 53, 323–332. [CrossRef]
- Zegarra-Ruiz, D.F.; El Beidaq, A.; Iñiguez, A.J.; Lubrano Di Ricco, M.; Manfredo Vieira, S.; Ruff, W.E.; Mubiru, D.; Fine, R.L.; Sterpka, J.; Greiling, T.M.; et al. A Diet-Sensitive Commensal Lactobacillus Strain Mediates TLR7-Dependent Systemic Autoimmunity. Cell Host Microbe 2019, 25, 113-127.e6. [CrossRef]
- Mohd, R.; Chin, S.-F.; Shaharir, S.S.; Cham, Q.S. Involvement of Gut Microbiota in SLE and Lupus Nephritis. Biomedicines 2023, 11, 653. [CrossRef]
- Moleón, J.; González-Correa, C.; Miñano, S.; Robles-Vera, I.; de la Visitación, N.; Barranco, A.M.; Gómez-Guzmán, M.; Sánchez, M.; Riesco, P.; Guerra-Hernández, E.; et al. Protective Effect of Microbiota-Derived Short Chain Fatty Acids on Vascular Dysfunction in Mice with Systemic Lupus Erythematosus Induced by Toll like Receptor 7 Activation. Pharmacol Res 2023, 198, 106997. [CrossRef]
- Ma, T.; Tang, B.; Wang, Y.; Shen, M.; Ping, Y.; Wang, L.; Su, J. Cinnamon Oil Solid Self-Microemulsion Mediates Chronic Mild Stress-Induced Depression in Mice by Modulating Monoamine Neurotransmitters, Corticosterone, Inflammation Cytokines, and Intestinal Flora. Heliyon 2023, 9, e17125. [CrossRef]
- Xiao, Y.; Zhang, F.; Xu, H.; Yang, C.; Song, X.; Zhou, Y.; Zhou, X.; Liu, X.; Miao, J. Cinnamaldehyde Microcapsules Enhance Bioavailability and Regulate Intestinal Flora in Mice. Food Chem X 2022, 15, 100441. [CrossRef]
- Park, S.-Y.; Kim, Y.D.; Kim, M.S.; Kim, K.-T.; Kim, J.Y. Cinnamon (Cinnamomum Cassia) Water Extract Improves Diarrhea Symptoms by Changing the Gut Environment: A Randomized Controlled Trial. Food Funct 2023, 14, 1520–1529. [CrossRef]
- Vita, A.A.; Roberts, K.M.; Gundersen, A.; Farris, Y.; Zwickey, H.; Bradley, R.; Weir, T.L. Relationships between Habitual Polyphenol Consumption and Gut Microbiota in the INCLD Health Cohort. Nutrients 2024, 16, 773. [CrossRef]
- Wolfe, A.J. Glycolysis for Microbiome Generation. Microbiol Spectr 2015, 3. [CrossRef]
- Li, A.-L.; Ni, W.-W.; Zhang, Q.-M.; Li, Y.; Zhang, X.; Wu, H.-Y.; Du, P.; Hou, J.-C.; Zhang, Y. Effect of Cinnamon Essential Oil on Gut Microbiota in the Mouse Model of Dextran Sodium Sulfate-Induced Colitis. Microbiol Immunol 2020, 64, 23–32. [CrossRef]
- Manfredo Vieira, S.; Hiltensperger, M.; Kumar, V.; Zegarra-Ruiz, D.; Dehner, C.; Khan, N.; Costa, F.R.C.; Tiniakou, E.; Greiling, T.; Ruff, W.; et al. Translocation of a Gut Pathobiont Drives Autoimmunity in Mice and Humans. Science 2018, 359, 1156–1161. [CrossRef]
- Oaks, Z.; Winans, T.; Caza, T.; Fernandez, D.; Liu, Y.; Landas, S.K.; Banki, K.; Perl, A. Mitochondrial Dysfunction in the Liver and Antiphospholipid Antibody Production Precede Disease Onset and Respond to Rapamycin in Lupus-Prone Mice. Arthritis & Rheumatology (Hoboken, N.J.) 2016, 68, 2728–2739. [CrossRef]
- Flynn, J.M.; Melov, S. SOD2 in Mitochondrial Dysfunction and Neurodegeneration. Free Radic Biol Med 2013, 62, 4–12. [CrossRef]
- Jomova, K.; Alomar, S.Y.; Alwasel, S.H.; Nepovimova, E.; Kuca, K.; Valko, M. Several Lines of Antioxidant Defense against Oxidative Stress: Antioxidant Enzymes, Nanomaterials with Multiple Enzyme-Mimicking Activities, and Low-Molecular-Weight Antioxidants. Arch Toxicol 2024, 98, 1323–1367. [CrossRef]
- Lee, S.-C.; Wang, S.-Y.; Li, C.-C.; Liu, C.-T. Anti-Inflammatory Effect of Cinnamaldehyde and Linalool from the Leaf Essential Oil of Cinnamomum Osmophloeum Kanehira in Endotoxin-Induced Mice. J Food Drug Anal 2018, 26, 211–220. [CrossRef]










| Sham Mice | Sham Cinnamon | Sham Lupus | Lupus Cinnamon | Cinnamon Lupus Cinnamon | |
|---|---|---|---|---|---|
| Other genus | 46.4 | 37.2 | 36.4 | 53.5 | 51.2 |
| Lactobacillus | 6.7 | 27.9 | 13.6 | 5.4 | 21.2 |
| Limosilactobacillus | 3.5 | 12.6 | 6.6 | 6.0 | 11.2 |
| Ligilactobacillus | 1.3 | 2.5 | 4.9 | 5.5 | 2.0 |
| Dubosiella | 4.5 | 1.9 | 2.8 | 5.2 | 0.1 |
| Faecalibacterium | 20.5 | 1.4 | 1.5 | 3.6 | 0.0 |
| Staphylococcus | 0.3 | 5.8 | 12.5 | 5.8 | 8.2 |
| Lachnospiraceae genus | 5.2 | 5.3 | 3.5 | 3.4 | 0.4 |
| Bacteroides | 2.4 | 1.1 | 9.1 | 3.0 | 4.7 |
| Prevotella | 4.1 | 3.2 | 5.7 | 7.1 | 0.8 |
| Bifidobacterium | 5.1 | 1.2 | 3.4 | 1.5 | 0.0 |
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2025 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).