Submitted:
11 September 2018
Posted:
11 September 2018
You are already at the latest version
Abstract
The paper presents the results of the research concerning an evaluation of information 1
technology of gene expression profiles processing stability with the use of gene expression profiles 2
with different levels of noise component. The information technology is presented as a structural 3
block-chart, which contains all stages of the studied data processing. The hybrid model of objective 4
clustering based on SOTA algorithm and the technology of gene regulatory networks reconstruction 5
have been studied to evaluate the stability to the level of the noise component. The results of the 6
simulation have shown that the hybrid model of objective clustering has high level of stability 7
to noise component and vice versa, the technology of gene regulatory networks reconstruction is 8
very sensitivity to level of noise component. The obtained results indicate the importance of gene 9
expression profiles preprocessing at early stage of gene regulatory network reconstruction in order to 10
remove background noise and non-informative genes in terms of used criteria
Keywords:
objective clustering
; biclustering
; gene regulatory networks
; reconstruction
; validation
; gene expression profiles
; noise component
; systems stability
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