Preprint Article Version 1 Preserved in Portico This version is not peer-reviewed

Proteomic analysis of human iPSC derived neural stem cells and motor neurons identifies proteasome structural alterations.

Version 1 : Received: 6 October 2023 / Approved: 6 October 2023 / Online: 9 October 2023 (10:51:37 CEST)

A peer-reviewed article of this Preprint also exists.

Álvarez, I.; Tirado-Herranz, A.; Alvarez-Palomo, B.; Osete, J.R.; Edel, M.J. Proteomic Analysis of Human iPSC-Derived Neural Stem Cells and Motor Neurons Identifies Proteasome Structural Alterations. Cells 2023, 12, 2800. Álvarez, I.; Tirado-Herranz, A.; Alvarez-Palomo, B.; Osete, J.R.; Edel, M.J. Proteomic Analysis of Human iPSC-Derived Neural Stem Cells and Motor Neurons Identifies Proteasome Structural Alterations. Cells 2023, 12, 2800.

Abstract

Background: Proteins targeted by the Ubiquitin Proteasome System (UPS) are identified for degradation by the proteasome, which has been implicated in the development of neuro-degenerative diseases. Major histocompatibility complex (MHC) molecules present peptides broken down by the proteasome and are involved in neuronal plasticity, regulating synapse number and axon regeneration in the central or peripheral nervous system during develop-ment and in brain diseases. The mechanisms governing these effects are mostly unknown, but evidence from different compartments of the cerebral cortex indicates the presence of im-mune-like MHC receptors in the central nervous system. Methods: We have used human induced pluripotent stem cells (iPSC) differentiated to neural stem cells and then to motor neurons as a developmental model to better understand the structure of the proteasome in developing motor neurons. We perform a proteomic analysis of starting human skin fibroblasts, their matching iPSC, differentiated neural stem cells and motor neurons that highlighted significant differences in the constitutive proteasome and immunoproteasome subunits during development towards motor neurons from iPSC. Results: Proteomic analysis showed that the catalytic proteasome subunits expressed in fi-broblasts differ to those in neural stem cells and motor neurons. Western blot analysis con-firmed the proteomic data, particularly the decreased expression of Beta5i (PSMB8) subunit immunoproteasome. Conclusion: The constitutive proteasome subunits are upregulated in iPSC from HFF and the immunoproteasome subunit beta 5i expression is higher in MN than NSC suggesting a im-munoproteasome phenotype in MN. The immunoproteasome may have implications on motor neuron development and neurodevelopmental diseases that warrants further investi-gation.

Keywords

Proteomics, Induced pluripotent stem cells, Differentiation, Neural Stem Cells, Motor Neurons, 26S proteasome, Proteasome.

Subject

Biology and Life Sciences, Cell and Developmental Biology

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