In this paper, we will consider an autonomous two-dimensional ODE Kolmogorov type 1 system with three parameters, which is a particular system of the general predator–prey systems with 2 a Holling type II. By reformulating this system as a set of two second order differential equations, we 3 will investigate the nonlinear dynamics of the system from the Jacobi stability point of view, using 4 the Kosambi-Cartan-Chern (KCC) geometric theory. We will determine the nonlinear connection, the 5 Berwald connection and the five KCC-invariants which express the intrinsic geometric properties 6 of the system, including the deviation curvature tensor. Furthermore, we will obtain necessary and 7 sufficient conditions on the parameters of the system in order to have the Jacobi stability near the 8 equilibrium points and we will point out these on a few examples.