Flore, L.; Francalacci, P.; Massidda, M.; Robledo, R.; Calò, C.M. Influence of Different Evolutive Forces on GDF5 Gene Variability. Genes 2023, 14, 1895, doi:10.3390/genes14101895.
Flore, L.; Francalacci, P.; Massidda, M.; Robledo, R.; Calò, C.M. Influence of Different Evolutive Forces on GDF5 Gene Variability. Genes 2023, 14, 1895, doi:10.3390/genes14101895.
Flore, L.; Francalacci, P.; Massidda, M.; Robledo, R.; Calò, C.M. Influence of Different Evolutive Forces on GDF5 Gene Variability. Genes 2023, 14, 1895, doi:10.3390/genes14101895.
Flore, L.; Francalacci, P.; Massidda, M.; Robledo, R.; Calò, C.M. Influence of Different Evolutive Forces on GDF5 Gene Variability. Genes 2023, 14, 1895, doi:10.3390/genes14101895.
Abstract
GDF5 gene is involved in the development of skeletal elements, synovial joint formation, tendons, ligaments, and cartilage. Several polymorphisms are present within the gene and two of them, rs143384 and 143383, have been reported as correlated with osteoarticular disease or muscle flexibility. The aim of this research is to verify if the worldwide distribution among human populations of rs143384 polymorphism has been shaped by selective pressure, or if it’s the result of random genetic drift events. Ninety-four individuals of both sexes, 18-28 years old, from Sardinia were analyzed. We observed the following genotype frequencies: 28.72% of homozygotes AA, 13.83% of homozygotes GG, and 57.45% of heterozygotes AG. Allele frequencies were 0.574 for allele A and 0.426 for alle G. Relationships between populations were verified by Multidimensional Scaling (MDS). Our data show: i) a clear heterogeneity within the African populations; ii) a strong differentiation between Africans and the other populations: iii) the Sardinian population is placed withing the European cluster. To reveal possible traces of selective pressure, Population Branch Statistic (PBS) was calculated; both SNPs rs143384 and 143383 have low PBS values, suggesting that there are no signals of selective pressure in those areas of the gene.
Keywords
Single nucleotide polymorphism, Population Branch Statistic, selective pressure.
Subject
Biology and Life Sciences, Biology and Biotechnology
Copyright:
This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
