Preprint Review Version 2 Preserved in Portico This version is not peer-reviewed

A Hierarchical Framework for Assessing Transmission Causality of Respiratory Viruses

Version 1 : Received: 22 April 2021 / Approved: 23 April 2021 / Online: 23 April 2021 (11:59:58 CEST)
Version 2 : Received: 28 June 2022 / Approved: 30 June 2022 / Online: 30 June 2022 (03:33:13 CEST)

A peer-reviewed article of this Preprint also exists.

Jefferson, T.; Heneghan, C.J.; Spencer, E.; Brassey, J.; Plüddemann, A.; Onakpoya, I.; Evans, D.; Conly, J. A Hierarchical Framework for Assessing Transmission Causality of Respiratory Viruses. Viruses 2022, 14, 1605. Jefferson, T.; Heneghan, C.J.; Spencer, E.; Brassey, J.; Plüddemann, A.; Onakpoya, I.; Evans, D.; Conly, J. A Hierarchical Framework for Assessing Transmission Causality of Respiratory Viruses. Viruses 2022, 14, 1605.

Abstract

Systematic reviews of 591 primary studies of the modes of transmission for SARS-CoV-2 show significant methodological shortcomings and heterogeneity in the design, conduct, testing and reporting of SARS-CoV-2 transmission. While this is partly understandable at the outset of a pandemic, evidence rules of proof for assessing the transmission of this virus are needed for pre-sent and future pandemics of viral respiratory pathogens. We review the history of causality as-sessment related to microbial etiologies with a focus on respiratory viruses and suggest a hierar-chy of evidence to integrate clinical, epidemiologic, molecular and laboratory perspectives on transmission. The hierarchy, if applied to future studies, should narrow the uncertainty over the twin concepts of causality and transmission of human respiratory viruses. We attempt to address the translational gap between the current research evidence and the assessment of causality in the transmission of respiratory viruses with a focus on SARS-CoV-2. Experimentation, consistency and independent replication of research alongside our proposed framework provide a chain of evidence that can reduce the uncertainty over the transmission of respiratory viruses and increase the level of confidence in specific modes of transmission, informing the measures that should be undertaken to prevent transmission.

Keywords

viral transmission; causation; evidence hierarchy; SARS-CoV-2; respiratory pathogens

Subject

Medicine and Pharmacology, Pulmonary and Respiratory Medicine

Comments (1)

Comment 1
Received: 30 June 2022
Commenter: Tom Jefferson
Commenter's Conflict of Interests: Author
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