I propose a dynamic evolution hypothesis regarding the evolution of organisms by incorporating both diminished fitness returns and mutation rate tuning during adaptation to a constant environment. Basically, accumulating evidence from life history studies conducted over the past 70 years suggests that the evolution of individual fitness is subject to ecological constraints, leading to the evolutionary existence of an upper limit of individual fitness (ULIF). Given the existence of the ULIF, organismal evolution, which might initially have relatively great fitness returns through primarily Darwinian evolution, will eventually be subject to diminished fitness returns towards zero. With the diminished fitness return, Darwinian selection strength may eventually become smaller than the power of random genetic drift, leading to the occurrence of neutral evolution at both phenotypic and molecular levels. Meanwhile, mutation rates may change from an initial increase, due to the relatively strong fitness return, to subsequent decreases, due to both the diminished fitness return of beneficial mutations and the cost of deleterious mutations. The diminished fitness returns with subsequently reduced mutation rates are two potential evolution barriers leading to eventual evolutionary stasis. These findings provide important insights for understanding the conditions for the occurrences of different evolutionary patterns. Darwinian evolution theory, neutral evolution theory and punctuated equilibrium theory can be unified in the context of the dynamic evolution hypothesis formulated in this study.

The main objective is to offer a functionally coherent counter-narrative to the polarized views prevailing now about the complex ‘Eukaryogenesis problem’ versus the “primitive” nature ascribed to so-called “Prokaryotes” (termed Akaryotes herein). The paradigm shift presented aims at bridging the conceptual gap between the rudimentary beginnings of biomolecular cooperativity on a pristine Earth (the Origins of Life or OoL) and the beginnings of lineage-wise diversification toward Darwinean speciation in the Tree of Life (or ToL). Although the research field as a whole is not aware of a corresponding ‘Prokaryogenesis problem’, the evolutionary process resulting in the partly independent archaeal and bacterial cell types is not fully understood. The present paper provides an explanation for these problems based on coevolutionary complementarity at multiple levels. The unconventional model connects various stages from “neighborhood selection” in film-like layers of unbounded “surface protoplasm” based on short “statistical proteins”, via a closely knit “peptide/RNA partnership” in the “making of genes”, toward the “making of genomes” in several RNA-to-DNA transitions. Three virus-related plasmids carrying different DNA replicases may have initiated the vertical stability of hereditable lineages that led to the three “domains” of organismal life, with a fourth lineage ending in eukaryotic organelles. These partly independent transitions established DNA as a late-comer of fundamental biomolecules.

Closed timelike curves (CTCs), non-intuitive theoretical solutions of general relativity field equations can be modelled in quantum mechanics in a way, known as Deutsch-CTCs, to circumvent one of their most paradoxical implications, namely, the so-called grandfather paradox. An outstanding theoretical result of this model is the demonstration that in the presence of a Deutsch-CTC a classical computer would be computationally equivalent to a quantum computer. In the present study, the possible implications of such a striking result for the foundations of quantum mechanics and the connections between classicality and quantumness are explored. To this purpose, a model for fundamental particles that interact in physical space exchanging carriers of momentum and energy is considered. Every particle is then supplemented with an information space in which a probabilistic classical Turing machine is stored. It is analysed whether, through the action of Darwinian evolution, both a classical algorithm coding the rules of quantum mechanics and an anticipation module might plausibly be developed on the information space from initial random behaviour. The simulation of a CTC on the information space of the particle by means of the anticipation module would imply that fundamental particles, which do not possess direct intrinsic quantum features from first principles in this information-theoretic Darwinian approach, could however generate quantum emergent behaviour in real time as a consequence of Darwinian evolution acting on information-theoretic physical systems.