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The Molecular Intersection of NEK1, C21ORF2, Cyclin F, and VCP in ALS Pathogenesis
Yasuaki Watanabe,
Tadashi Nakagawa,
Makiko Nakagawa,
Keiko Nakayama
Posted: 18 March 2025
Mechanisms of Resistance to Current Glioblastoma Therapies
Tierney Woitas,
Kaustov Chakrabarti,
Amanda Mohabir,
Mahesh Nukala,
Sara Safiullah
Posted: 17 March 2025
Predicting Freezing of Gait in Parkinson’s Disease: A Machine Learning-Based Approach in ON and OFF Medication States
Georgios Bouchouras,
Georgios Sofianidis,
Konstantinos Kotis
Posted: 17 March 2025
Analysis of Neural Similarity Between Hypnotizer and Hypnotized Individuals Using Autoencoders and PCA
Rozita Aboutorabi
Posted: 17 March 2025
Neuroprotective Properties of Clove (Syzygium aromaticum): State of Art and Future Pharmaceutical Applications for Alzheimer Disease
Tatevik Sargsyan,
Hayarpi M. Simonyan,
Lala Stepanyan,
Avetis Tsaturyan,
Caterina Vicidomini,
Raffaele Pastore,
Germano Guerra,
Giovanni Nicola Roviello
This study explores the neuropharmacological potential of various molecular and amino acid components derived from Syzygium aromaticum (clove), an aromatic spice with a long history of culinary and medicinal use. Key bioactive compounds such as eugenol, α-humulene, β-caryophyllene, gallic acid, quercetin, and luteolin demonstrate antioxidant, anti-inflammatory, and neuroprotective properties by scavenging free radicals, modulating calcium channels, and reducing neuroinflammation and oxidative stress. Moreover, gallic acid and asiatic acid exhibit protective effects, including apoptosis inhibition, while other useful properties of clove phytocompounds include NF-κB pathway inhibition, membrane stabilization, and suppression of pro-inflammatory pathways, further contributing to neuroprotection and cognitive enhancement. Amino acid analysis revealed essential and non-essential amino acids such as aspartic acid, serine, glutamic acid, glycine, histidine, and arginine in various clove parts (buds, fruits, branches, and leaves). These amino acids play crucial roles in neurotransmitter synthesis, immune modulation, antioxidant defense, and metabolic regulation. Collectively, these bioactive molecules and amino acids contribute to clove’s antioxidant, anti-inflammatory, neurotrophic, and neurotransmitter-modulating effects, highlighting its potential as a preventive and therapeutic candidate for neurodegenerative disorders. While preliminary preclinical studies support these neuroprotective properties, further research, including clinical trials, is needed to validate the efficacy and safety of clove-based interventions in neuroprotection.
This study explores the neuropharmacological potential of various molecular and amino acid components derived from Syzygium aromaticum (clove), an aromatic spice with a long history of culinary and medicinal use. Key bioactive compounds such as eugenol, α-humulene, β-caryophyllene, gallic acid, quercetin, and luteolin demonstrate antioxidant, anti-inflammatory, and neuroprotective properties by scavenging free radicals, modulating calcium channels, and reducing neuroinflammation and oxidative stress. Moreover, gallic acid and asiatic acid exhibit protective effects, including apoptosis inhibition, while other useful properties of clove phytocompounds include NF-κB pathway inhibition, membrane stabilization, and suppression of pro-inflammatory pathways, further contributing to neuroprotection and cognitive enhancement. Amino acid analysis revealed essential and non-essential amino acids such as aspartic acid, serine, glutamic acid, glycine, histidine, and arginine in various clove parts (buds, fruits, branches, and leaves). These amino acids play crucial roles in neurotransmitter synthesis, immune modulation, antioxidant defense, and metabolic regulation. Collectively, these bioactive molecules and amino acids contribute to clove’s antioxidant, anti-inflammatory, neurotrophic, and neurotransmitter-modulating effects, highlighting its potential as a preventive and therapeutic candidate for neurodegenerative disorders. While preliminary preclinical studies support these neuroprotective properties, further research, including clinical trials, is needed to validate the efficacy and safety of clove-based interventions in neuroprotection.
Posted: 14 March 2025
Epicoccin A Ameliorates PD-Like Symptoms in Zebrafish: Enhancement of PINK1/Parkin-Dependent Mitophagy and Inhibition of Excessive Oxidative Stress
Haicheng Ye,
Dan Li,
Lei Zhang,
Yufei Wang,
Cong Wang,
Meng Jin,
Houwen Lin,
Peihai Li,
Chen Sun,
Ning Li
Posted: 14 March 2025
Reward Network Activations of Win Versus Loss in a Monetary Gambling Task
Chella Kamarajan,
Babak Assai Ardekani,
Ashwini K. Pandey,
Gayathri Pandey,
Sivan Kinreich,
Weipeng Kuang,
Jacquelyn L. Meyers,
Bernice Porjesz
Posted: 13 March 2025
Neural Mechanism of 5-HT4R-Mediated Memory Enhancement in Hippocampal-Prefrontal Circuits in a Mouse Model of Schizophrenia
Thomas Gener,
Sara Hidalgo-Nieves,
Cristina López-Cabezón,
M. Victoria Puig
Posted: 12 March 2025
Flow Cytometric Analysis and Sorting of Enteric Nervous System Cells: From Human to Mouse, an Optimized Protocol
Faidra Karkala,
Indy de Bosscher,
Jonathan D. Windster,
Savio Stroebel,
Lars van Zanten,
Maria M. Alves,
Andrea Sacchetti
Isolation of neurons and glial cells from the enteric nervous system (ENS) enables ex-vivo studies, including analysis of genomic and transcriptomic profiles. While we previously reported a fluorescence activated cell sorting (FACS)-based isolation protocol for human ENS cells, no equivalent exists for mice. As directly applying the human protocol to mouse tissue, resulted in low recovery of live ENS cells, we compared different protocols to optimize tissue dissociation of mouse colons. A 30-minute Liberase-based digestion showed optimal recovery of viable ENS cells, with CD56 and CD24 emerging as the most reliable markers to select and subdivide these cells. ENS identity was further validated by FACS using neuronal (TUBB3) and glial (SOX10) markers, and reverse transcriptase quantitative PCR (RT-qPCR) on sorted fractions. Overall, the mouse ENS expression profile significantly overlapped with the human one, confirming that current dissociation protocols yield a mixed staining pattern of enteric neurons and glia. Nonetheless, using the imaging flow cytometer BD S8 FACS Discover, and ELAVL4 as a neuronal soma-associated marker, we observed enrichment of neurons, at the TIP of the CD56/CD24 population. In conclusion, we present here a protocol for high purity FACS-based isolation of viable enteric neurons and glial cells, suitable for downstream applications.
Isolation of neurons and glial cells from the enteric nervous system (ENS) enables ex-vivo studies, including analysis of genomic and transcriptomic profiles. While we previously reported a fluorescence activated cell sorting (FACS)-based isolation protocol for human ENS cells, no equivalent exists for mice. As directly applying the human protocol to mouse tissue, resulted in low recovery of live ENS cells, we compared different protocols to optimize tissue dissociation of mouse colons. A 30-minute Liberase-based digestion showed optimal recovery of viable ENS cells, with CD56 and CD24 emerging as the most reliable markers to select and subdivide these cells. ENS identity was further validated by FACS using neuronal (TUBB3) and glial (SOX10) markers, and reverse transcriptase quantitative PCR (RT-qPCR) on sorted fractions. Overall, the mouse ENS expression profile significantly overlapped with the human one, confirming that current dissociation protocols yield a mixed staining pattern of enteric neurons and glia. Nonetheless, using the imaging flow cytometer BD S8 FACS Discover, and ELAVL4 as a neuronal soma-associated marker, we observed enrichment of neurons, at the TIP of the CD56/CD24 population. In conclusion, we present here a protocol for high purity FACS-based isolation of viable enteric neurons and glial cells, suitable for downstream applications.
Posted: 11 March 2025
Shorter Telomere Length in Individuals with Neurocognitive Disorder and APOE-ε4 Genotype
Paola Mejía-Ortiz,
Alma Delia Genis-Mendoza,
Ramon Ramínez Villanueva,
Susana López Ramírez,
Rafael Gúzman Sánchez,
Thalía Fernández,
Jorge Sigg-Alonso,
Humberto Nicolini-Sánchez
Posted: 10 March 2025
Accelerating Biomedical Discoveries in Aging and Neurodegeneration Through Transformative Neuropathology
Melissa E. Murray,
Colin Smith,
Vilas Menon,
C. Dirk Keen,
Ed S. Lein,
Michael Hawrylycz,
Adriano Aguzzi,
Brett Benedetti,
Katja Brose,
Kelsey Caetano-Anolles
Posted: 10 March 2025
The Feud over Lactate and Its Role in Brain Energy Metabolism and Beyond: An Unnecessary Burden on Research and the Scientists Who Practice It
Avital Schurr
Posted: 10 March 2025
Using Allen Brain Cell Atlas of the Human Brain to Gain Insights into the C-Terminal Binding Protein 1 (CTBP1)’s Potential Function
Uthayashanker R Ezekiel,
Suhjin Lee
C-terminal binding proteins (CtBPs) dimerize and function predominantly as transcriptional corepressors by targeting various chromatin-modifying factors to promoter-bound repressors. Hypotonia, Ataxia, Developmental-Delay, and Tooth-Enamel Defects Syndrome (HADDTS) is a recently discovered neurodevelopmental disorder resulting from a heterozygous missense mutation in CTBP1. It is often associated with the early onset of profound cerebellar atrophy in patients. To understand CtBP1's role in brain function and the etiology of HADDTS, Allen Institute’s Allen Brain Cell (ABC) human brain atlas was used. Based on the ABC atlas, CTBP1 is highly expressed in the upper rhombic lip supercluster which gives rise to the majority of the cerebellar granule cells. The results correlate with the cerebellum related manifestations observed in HADDTS patients.
C-terminal binding proteins (CtBPs) dimerize and function predominantly as transcriptional corepressors by targeting various chromatin-modifying factors to promoter-bound repressors. Hypotonia, Ataxia, Developmental-Delay, and Tooth-Enamel Defects Syndrome (HADDTS) is a recently discovered neurodevelopmental disorder resulting from a heterozygous missense mutation in CTBP1. It is often associated with the early onset of profound cerebellar atrophy in patients. To understand CtBP1's role in brain function and the etiology of HADDTS, Allen Institute’s Allen Brain Cell (ABC) human brain atlas was used. Based on the ABC atlas, CTBP1 is highly expressed in the upper rhombic lip supercluster which gives rise to the majority of the cerebellar granule cells. The results correlate with the cerebellum related manifestations observed in HADDTS patients.
Posted: 09 March 2025
Comparative Analysis of Machine Learning Techniques on the BraTS Dataset for Brain Tumor Classification
Shuping Wang,
Min LI
Posted: 05 March 2025
Distribution and Neurochemical Characterization of Dorsal Root Ganglia (DRG) Neurons Containing Phoenixin (PNX) and Supplying the Porcine Urinary Bladder
Paweł Janikiewicz,
Urszula Mazur,
Piotr Holak,
Nastassia Karakina,
Kamil Węglarz,
Mariusz Krzysztof Majewski,
Agnieszka Bossowska
Posted: 05 March 2025
Epidemiological Data, Clinical Signs, Therapy and Outcome Evaluation in Dogs with Syringomyelia of Different Etiology
Rania D. Baka,
Ioannis Savvas,
Eirini Sarpekidou,
George Kazakos,
Zoe Polizopoulou
Posted: 27 February 2025
Extracranial Vascular Arterial Stiffness Contributes to Cerebral Small Vessel Disease, Stroke, and Late-Onset Alzheimer’s Disease
Melvin R Hayden,
Neetu Tyagi
Posted: 25 February 2025
Hypergraph Analysis of Functional Brain Connectivity During Figurative Attention
Alexander N. Pisarchik,
Natalia Peña Serrano,
Walter Escalante Puente de la Vega,
Rider Jaimes-Reátegui
Hypergraph analysis extends traditional graph theory by enabling the study of complex, many-to-many relationships in networks, offering powerful tools for understanding brain connectivity. This case study introduces a novel methodology for constructing both graphs and hypergraphs of functional brain connectivity during figurative attention tasks, where subjects interpret the ambiguous Necker cube illusion. Using a frequency-tagging approach, we simultaneously modulated two cube faces at distinct frequencies while recording electroencephalography (EEG) responses. Brain connectivity networks were constructed using multiple measures - coherence, cross-correlation, and mutual information - providing complementary insights into functional relationships between regions. Our hypergraph analysis revealed distinct connectivity patterns associated with attending to different cube orientations, including previously unobserved higher-order relationships between brain regions. The results demonstrate bilateral cortico-cortical interactions and suggest integrated processing hubs that may coordinate visual attention networks. This methodological framework not only advances our understanding of the neural basis of visual attention but also offers potential applications in attention monitoring and clinical assessment of attention disorders. While based on a single subject, this proof-of-concept study establishes a foundation for larger-scale investigations of brain network dynamics during ambiguous visual processing.
Hypergraph analysis extends traditional graph theory by enabling the study of complex, many-to-many relationships in networks, offering powerful tools for understanding brain connectivity. This case study introduces a novel methodology for constructing both graphs and hypergraphs of functional brain connectivity during figurative attention tasks, where subjects interpret the ambiguous Necker cube illusion. Using a frequency-tagging approach, we simultaneously modulated two cube faces at distinct frequencies while recording electroencephalography (EEG) responses. Brain connectivity networks were constructed using multiple measures - coherence, cross-correlation, and mutual information - providing complementary insights into functional relationships between regions. Our hypergraph analysis revealed distinct connectivity patterns associated with attending to different cube orientations, including previously unobserved higher-order relationships between brain regions. The results demonstrate bilateral cortico-cortical interactions and suggest integrated processing hubs that may coordinate visual attention networks. This methodological framework not only advances our understanding of the neural basis of visual attention but also offers potential applications in attention monitoring and clinical assessment of attention disorders. While based on a single subject, this proof-of-concept study establishes a foundation for larger-scale investigations of brain network dynamics during ambiguous visual processing.
Posted: 25 February 2025
Gelsolin Facilitates Estrogen Receptor Beta Nuclear Translocation and Transcriptional Repression of Genes Associated with Alzheimer Disease
Yoldas Yildiz,
Angela H.S. Fan,
Amanda A. Hartoun,
Sarah Flury,
Yan Ngai,
Toni R. Pak
Background/Objectives: Gelsolin (GSN) is an actin-binding protein that helps maintain neuronal structure and shape, regulates neuronal growth, and apoptosis. Our previous work demonstrated that GSN associated with estrogen receptor beta (ERb1) in the brains of female rats, but this association was lost in advanced age. GSN was also required for ERb1-mediated transcriptional repression at activator protein-1 (AP-1) motifs upstream of a minimal gene promoter. However, the consequences of the loss of GSN:ERb1 protein interaction on ERb1 nuclear translocation and transcriptional repression at AP-1 sites located within complex endogenous gene promoters remained unclear. Methods: We used immunofluorescent super resolution microscopy and luciferase reporter assays to test the hypothesis that GSN facilitates ERb1 nuclear translocation and transcriptional repression of two genes relevant for Alzheimer Disease: APP (amyloid-beta precursor protein) and ITPKB (inositol-1,4,5-trisphosphate 3-kinase B). Results: Our results revealed the novel finding that GSN is required for ERb1 ligand–independent nuclear translocation in neuronal cells. Moreover, we show that GSN increased APP and ITPKB promoter activity, which was repressed by ERb1. Conclusions: Together, these data revealed the importance of the cytoskeletal protein, GSN, in regulating intracellular trafficking of nuclear receptors and demonstrate the first evidence of ERb1 directly regulating two genes that are implicated in the progression of AD.
Background/Objectives: Gelsolin (GSN) is an actin-binding protein that helps maintain neuronal structure and shape, regulates neuronal growth, and apoptosis. Our previous work demonstrated that GSN associated with estrogen receptor beta (ERb1) in the brains of female rats, but this association was lost in advanced age. GSN was also required for ERb1-mediated transcriptional repression at activator protein-1 (AP-1) motifs upstream of a minimal gene promoter. However, the consequences of the loss of GSN:ERb1 protein interaction on ERb1 nuclear translocation and transcriptional repression at AP-1 sites located within complex endogenous gene promoters remained unclear. Methods: We used immunofluorescent super resolution microscopy and luciferase reporter assays to test the hypothesis that GSN facilitates ERb1 nuclear translocation and transcriptional repression of two genes relevant for Alzheimer Disease: APP (amyloid-beta precursor protein) and ITPKB (inositol-1,4,5-trisphosphate 3-kinase B). Results: Our results revealed the novel finding that GSN is required for ERb1 ligand–independent nuclear translocation in neuronal cells. Moreover, we show that GSN increased APP and ITPKB promoter activity, which was repressed by ERb1. Conclusions: Together, these data revealed the importance of the cytoskeletal protein, GSN, in regulating intracellular trafficking of nuclear receptors and demonstrate the first evidence of ERb1 directly regulating two genes that are implicated in the progression of AD.
Posted: 25 February 2025
Effect of a Plant-Based Nootropic Supplement on Perceptual Decision-Making and Brain Network Interdependencies: A Randomised, Double-Blinded and Placebo-Controlled Study
David O' Reilly,
Joshua Bolam,
Ioannis Delis,
Andrea Utley
Posted: 24 February 2025
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