ARTICLE
|
doi:10.20944/preprints202204.0220.v1
Subject:
Computer Science And Mathematics,
Computational Mathematics
Keywords:
scRNA-seq; single cell; RNA-seq; DEG; differential expression; DE; benchmarking; scRNA-seq simulator
Online: 25 April 2022 (06:18:45 CEST)
ARTICLE
|
doi:10.20944/preprints202306.0483.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Rice seeds; dehydration rate; RNA-seq; DEGs
Online: 7 June 2023 (03:54:11 CEST)
ARTICLE
|
doi:10.20944/preprints202112.0149.v2
Online: 23 December 2021 (11:34:00 CET)
ARTICLE
|
doi:10.20944/preprints202102.0234.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
Principal Component Analysis, RNA-seq, prostate cancer, biomarkers, RNA genes
Online: 9 February 2021 (10:26:47 CET)
ARTICLE
|
doi:10.20944/preprints202406.0895.v1
Subject:
Biology And Life Sciences,
Food Science And Technology
Keywords:
RNA-seq; Transcriptionally Active Microbiome; Kefir; rheological properties
Online: 13 June 2024 (05:47:18 CEST)
ARTICLE
|
doi:10.20944/preprints201903.0124.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
RNA-Seq, htseq-count, HISAT2, bioinformatics, strandedness
Online: 11 March 2019 (09:06:40 CET)
ARTICLE
|
doi:10.20944/preprints202305.2113.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Corynebacterium pseudotuberculosis; gene expression; immunogenetics; RNA-seq
Online: 30 May 2023 (10:33:59 CEST)
ARTICLE
|
doi:10.20944/preprints202304.0547.v1
Subject:
Biology And Life Sciences,
Aquatic Science
Keywords:
Brown-marbled grouper; muscle; growth; RNA-seq
Online: 19 April 2023 (05:19:32 CEST)
ARTICLE
|
doi:10.20944/preprints202309.1172.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
HPV; Ficus carica; cervical cancer; RNA Seq
Online: 18 September 2023 (11:20:08 CEST)
ARTICLE
|
doi:10.20944/preprints202212.0177.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
sRNA analysis; small RNA; microRNA; piRNA; tRNA-derived small RNA; RNA-seq; small RNA fragments; benchmarking; differential expression analysis
Online: 10 February 2023 (11:26:06 CET)
ARTICLE
|
doi:10.20944/preprints202210.0401.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
diagnostics; rose virus; Capillovirus; Ilarvirus; Luteovirus; Partitiviridae; RNA-seq
Online: 26 October 2022 (07:22:18 CEST)
ARTICLE
|
doi:10.20944/preprints202310.1377.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Jeryak; longissimus dorsi; RNA-seq; miRNA; production performance
Online: 23 October 2023 (11:05:29 CEST)
ARTICLE
|
doi:10.20944/preprints202408.1452.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
upland cotton; seed size; RNA-seq; gene regulatory modules; GhUXS5
Online: 20 August 2024 (13:47:33 CEST)
ARTICLE
|
doi:10.20944/preprints201911.0202.v1
Subject:
Computer Science And Mathematics,
Probability And Statistics
Keywords:
Circ-RNA; CLIP-Seq; RBP
Online: 17 November 2019 (11:01:25 CET)
ARTICLE
|
doi:10.20944/preprints201903.0157.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
long non-coding RNA; hESC; cardiomyocyte; RNA-seq
Online: 15 March 2019 (02:11:52 CET)
REVIEW
|
doi:10.20944/preprints202202.0004.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
Spatial transcriptomics; Molecular imaging; single-cell RNA-seq; intratumoral heterogeneity
Online: 1 February 2022 (11:08:51 CET)
ARTICLE
|
doi:10.20944/preprints202408.1306.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Mastitis; Streptococcus agalactiae; UID- Dual; RNA- seq; mammary epithelial cells
Online: 19 August 2024 (09:57:34 CEST)
ARTICLE
|
doi:10.20944/preprints202002.0307.v1
Subject:
Medicine And Pharmacology,
Pathology And Pathobiology
Keywords:
SARS-CoV-2; ACE2; reproductive system; single-cell RNA-seq
Online: 21 February 2020 (08:09:25 CET)
ARTICLE
|
doi:10.20944/preprints201609.0062.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Nicotiana tabacum; solanesol; RNA-seq; solanesyl diphosphate synthase; gene expression; chlorophyll
Online: 18 September 2016 (10:45:27 CEST)
ARTICLE
|
doi:10.20944/preprints202404.1742.v1
Subject:
Biology And Life Sciences,
Cell And Developmental Biology
Keywords:
Lens; Lens Explants, FGFRs, PDGFRs, PTEN, RNA-seq, Inflammation, EMT
Online: 26 April 2024 (10:29:38 CEST)
ARTICLE
|
doi:10.20944/preprints202409.2437.v1
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
ALDH gene family; melon; abiotic and biotic stress; RNA-seq
Online: 1 October 2024 (08:44:32 CEST)
ARTICLE
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
transcriptome; Solanum lycopersicum; RNA-seq; light intensity distributions; differentially expressed genes
Online: 19 March 2019 (10:42:26 CET)
REVIEW
|
doi:10.20944/preprints202109.0253.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
Mycobacteria; Mycobacterium tuberculosis; non-coding RNA; RNA-seq; transcriptome
Online: 15 September 2021 (11:00:59 CEST)
ARTICLE
|
doi:10.20944/preprints202008.0103.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
chicken; Newcastle disease; spleen; immune response; gene expression; RNA-seq
Online: 4 August 2020 (16:09:52 CEST)
ARTICLE
|
doi:10.20944/preprints202310.0983.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
bioestimulant; flavonoids; tomato; hormones; RNA-seq
Online: 16 October 2023 (15:36:48 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0610.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
intramuscular fat content; meat color redness; RNA-seq; WGCNA; co-regulation
Online: 11 September 2023 (04:59:35 CEST)
ARTICLE
|
doi:10.20944/preprints201803.0145.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
repetitive elements; RNA-Seq; genomics; evolution; cytogenetics; supernumerary elements; extra chromosomes
Online: 19 March 2018 (08:33:48 CET)
ARTICLE
|
doi:10.20944/preprints201705.0070.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Chromatin and transcription dynamics; reproductive development; differentiation; ChIP-seq; RNA-seq
Online: 8 May 2017 (18:25:10 CEST)
ARTICLE
|
doi:10.20944/preprints202408.1210.v1
Subject:
Biology And Life Sciences,
Agricultural Science And Agronomy
Keywords:
mulberry; volatile organic compounds; metabolome; RNA-seq
Online: 16 August 2024 (08:39:54 CEST)
ARTICLE
|
doi:10.20944/preprints202312.0641.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
defensins; lipopolysaccharide; RNA-seq; RAW264.7; inflammation; mice
Online: 8 December 2023 (16:06:19 CET)
ARTICLE
|
doi:10.20944/preprints202308.2025.v1
Subject:
Biology And Life Sciences,
Life Sciences
Keywords:
intron retention; RNA-seq; cancer; diagnosis; prognosis
Online: 30 August 2023 (14:10:03 CEST)
ARTICLE
|
doi:10.20944/preprints202309.0662.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
legume-rhizobial symbiosis; Medicago truncatula; Sinorhizobium meliloti; NAD1; defense; Dual RNA-seq
Online: 11 September 2023 (10:57:43 CEST)
ARTICLE
|
doi:10.20944/preprints202209.0388.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
spatial single-cell analysis; intratumor heterogeneity; kriging; spatial entropy; Was-serstein distance; cancer; RNA-seq
Online: 26 September 2022 (08:57:58 CEST)
REVIEW
|
doi:10.20944/preprints202102.0230.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Astrocyte, Alzheimer´s disease, neurodegeneration, transcriptomics, RNA sequencing (RNA-seq), cellular states.
Online: 9 February 2021 (10:04:24 CET)
ARTICLE
|
doi:10.20944/preprints202304.0493.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Autotetraploid; Potato; RNA-Seq; WGCNA analysis; Hub genes
Online: 18 April 2023 (05:25:28 CEST)
ARTICLE
|
doi:10.20944/preprints202301.0097.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
mitochondria; iron transporters; MIT; developmental defects; RNA-seq
Online: 5 January 2023 (03:42:32 CET)
ARTICLE
|
doi:10.20944/preprints202201.0464.v1
Subject:
Biology And Life Sciences,
Ecology, Evolution, Behavior And Systematics
Keywords:
SCMV; Potyvirus; Resistance; RNA-Seq; Maize; eIF; eEF
Online: 31 January 2022 (13:25:38 CET)
ARTICLE
|
doi:10.20944/preprints202109.0224.v1
Subject:
Biology And Life Sciences,
Forestry
Keywords:
Drought; Norway spruce; Heterobasidion; RNA-seq; qRT-PCR
Online: 14 September 2021 (08:19:04 CEST)
ARTICLE
|
doi:10.20944/preprints202007.0711.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
co-expression network; residual feed intake; RNA-Seq
Online: 30 July 2020 (09:39:36 CEST)
ARTICLE
|
doi:10.20944/preprints201902.0042.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
RNA-Seq; Oncology; DNA repair; Survival; PCNA metagene
Online: 4 February 2019 (16:55:20 CET)
ARTICLE
|
doi:10.20944/preprints201809.0486.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Histone deacetylase, metabolism, peanut, hairy roots, RNA-seq
Online: 25 September 2018 (12:40:05 CEST)
ARTICLE
|
doi:10.20944/preprints201803.0257.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
RNA-seq; miRNA; pig; NGS; transcript analysis; muscle
Online: 30 March 2018 (06:02:33 CEST)
ARTICLE
|
doi:10.20944/preprints202404.0738.v1
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
Cucumber; Cucumis sativus; Fusarium wilt; metabolomic; RNA-seq; phenolic acid; flavonoids; fungal resistance
Online: 10 April 2024 (13:06:53 CEST)
COMMUNICATION
|
doi:10.20944/preprints202306.0189.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
RNA-seq; COVID-19; SARS-CoV-2; gene enrichment analysis; enriched pathways; differentially expressed genes; transcriptomics
Online: 2 June 2023 (11:12:22 CEST)
ARTICLE
|
doi:10.20944/preprints202305.0326.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
RNA-Seq; run-off in vitro transcription; RNA polymerase; sigma factor; TSS; promoter
Online: 5 May 2023 (07:54:09 CEST)
ARTICLE
|
doi:10.20944/preprints202309.1615.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Desmoglein-3; oral squamous carcinoma cells; RNA-Seq; bioinformatics; transmission electron microscopy; desmosomes; MMP-13; GJA1
Online: 25 September 2023 (05:16:14 CEST)
ARTICLE
|
doi:10.20944/preprints202307.0753.v1
Subject:
Biology And Life Sciences,
Insect Science
Keywords:
Aedes aegypti; insecticide resistance; RNA-Seq; detoxification genes; mosquitoes; Puerto Rico; organophosphate resistance; pyrethroid resistance
Online: 12 July 2023 (07:55:39 CEST)
ARTICLE
|
doi:10.20944/preprints202308.1902.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
ulcerative colitis; immune infiltration; activated NK-associated genes; diagnostic signature; bulk RNA-seq; scRNA-seq
Online: 29 August 2023 (09:01:01 CEST)
ARTICLE
|
doi:10.20944/preprints202407.0951.v1
Subject:
Biology And Life Sciences,
Cell And Developmental Biology
Keywords:
high glucose; Embryological Development; Zebrafish; RNA-seq; Metabolic Pathway
Online: 11 July 2024 (11:33:01 CEST)
ARTICLE
|
doi:10.20944/preprints202310.1204.v1
Subject:
Medicine And Pharmacology,
Other
Keywords:
gastric cancer; Nivolumab; immune response; tumor microenvironment; RNA-Seq
Online: 19 October 2023 (03:29:48 CEST)
ARTICLE
|
doi:10.20944/preprints202304.1269.v1
Subject:
Biology And Life Sciences,
Animal Science, Veterinary Science And Zoology
Keywords:
Qianbei Ma goat; Testis development; RNA-Seq; mRNA expression
Online: 30 April 2023 (08:44:18 CEST)
ARTICLE
|
doi:10.20944/preprints202202.0149.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
immune response; fatty acid; lipid metabolism; RNA-Seq; transcriptome
Online: 10 February 2022 (10:57:03 CET)
ARTICLE
|
doi:10.20944/preprints202111.0565.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Salt stress; Jerusalem artichoke; Time series analysis; RNA-seq
Online: 30 November 2021 (11:55:51 CET)
ARTICLE
|
doi:10.20944/preprints202103.0196.v1
Subject:
Biology And Life Sciences,
Anatomy And Physiology
Keywords:
Single cell RNA-seq; spatial reconstruction; development; coalescent embedding
Online: 5 March 2021 (21:21:59 CET)
ARTICLE
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
lncRNA; breast cancer; alternative splicing; estrogen receptor; RNA-Seq
Online: 19 April 2020 (04:29:31 CEST)
ARTICLE
|
doi:10.20944/preprints201912.0322.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
pm57; physical mapping; rna-seq; common wheat; molecular markers
Online: 24 December 2019 (11:30:27 CET)
ARTICLE
|
doi:10.20944/preprints202104.0344.v1
Subject:
Computer Science And Mathematics,
Algebra And Number Theory
Keywords:
Lysine; Rice; Amino Acids; Saline Stress; Abiotic Stress; Gene Regulatory Network; Bayesian Network; Parameter Estimation; Inference; RNA Seq
Online: 13 April 2021 (10:52:26 CEST)
ARTICLE
|
doi:10.20944/preprints202407.0231.v1
Subject:
Biology And Life Sciences,
Cell And Developmental Biology
Keywords:
cultivated crustacean meat; limb regeneration; stem cells; RNA-Seq; cell proliferation; muscle development; differential gene expression
Online: 3 July 2024 (04:19:42 CEST)
ARTICLE
|
doi:10.20944/preprints202201.0348.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
Data Science; Genomic Data Science; Machine Learning; Network Analysis; RNA-Seq; Precision Medicine; Subtyping; Parkinson’s Disease
Online: 24 January 2022 (11:36:51 CET)
ARTICLE
|
doi:10.20944/preprints202405.0167.v1
Subject:
Biology And Life Sciences,
Other
Keywords:
gene doping; erythropoietin; mouse model; RNA-seq; TaqMan-qPCR assay
Online: 3 May 2024 (07:17:22 CEST)
ARTICLE
|
doi:10.20944/preprints202312.0727.v1
Subject:
Biology And Life Sciences,
Toxicology
Keywords:
T-2 toxin; nephrotoxicity; transcriptome; RNA-seq; differential expression gene.
Online: 11 December 2023 (15:49:05 CET)
REVIEW
|
doi:10.20944/preprints202309.1551.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
shoot apical meristem (SAM); SAM conservation; Sc-RNA-seq; Streptophyta
Online: 22 September 2023 (11:00:55 CEST)
ARTICLE
|
doi:10.20944/preprints202305.0575.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
OsNAC050; CRISPR-Cas9; cold stress; RNA-seq; photosynthesis; soluble sugar
Online: 9 May 2023 (05:32:06 CEST)
ARTICLE
|
doi:10.20944/preprints202303.0266.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
drug resistance; flavonoids; RNA-seq; Klebsiella pneumoniae; Rutin; antibacterial agents
Online: 15 March 2023 (02:03:17 CET)
ARTICLE
|
doi:10.20944/preprints202209.0362.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
RNA-Seq; Vitamin K; Comorbidities; Differential Expressed Genes; Variant analysis
Online: 23 September 2022 (09:13:29 CEST)
REVIEW
|
doi:10.20944/preprints202209.0327.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
scRNA-seq; bioinformatics; subpopulations; analysis methods; single-cell RNA sequencing
Online: 21 September 2022 (11:22:50 CEST)
ARTICLE
|
doi:10.20944/preprints202202.0320.v1
Subject:
Medicine And Pharmacology,
Neuroscience And Neurology
Keywords:
Neurodegenerative disease; DJ-1; RNA-seq; Nrf2 signaling; lncRNA; MALAT1
Online: 25 February 2022 (02:40:02 CET)
ARTICLE
|
doi:10.20944/preprints202307.1142.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
cervical cancer; fig latex; ficus carica; RNA-seq; pathway enrichment; high risk HPV; antigen presentation; antigen processing
Online: 18 July 2023 (13:28:03 CEST)
ARTICLE
|
doi:10.20944/preprints202406.1536.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
cytokine release; Interferon; RNA-seq; oxidative stress; dsRNA; siRNA; innate immunity
Online: 24 June 2024 (04:17:57 CEST)
ARTICLE
|
doi:10.20944/preprints202402.0908.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
F. tikoua Bur.; A. philoxeroides; Plant invasion; RNA-seq; Rhizosphere microbial
Online: 16 February 2024 (11:33:22 CET)
ARTICLE
|
doi:10.20944/preprints202210.0087.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Echinoderm; Heat shock proteins; Ubiquitin; Regeneration; RNA-seq; Spinal cord injury
Online: 8 October 2022 (03:02:32 CEST)
ARTICLE
|
doi:10.20944/preprints202208.0340.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
SARS-CoV-2; RNA-Seq; miRNA; miR-1246; ACE2; Calu-3
Online: 18 August 2022 (10:45:51 CEST)
ARTICLE
|
doi:10.20944/preprints201903.0286.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
lung adenocarcinoma; KRAS; MYC; ERBB; mouse models of cancer; RNA-SEQ
Online: 30 March 2019 (06:41:07 CET)
ARTICLE
|
doi:10.20944/preprints202401.0732.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
apple; expression profiling; KEGG; red-flesh fruits; RNA-seq; RT-qPCR; transcriptome
Online: 10 January 2024 (04:33:22 CET)
BRIEF REPORT
|
doi:10.20944/preprints202109.0349.v1
Subject:
Medicine And Pharmacology,
Gastroenterology And Hepatology
Keywords:
RNA-Seq; bioinformatics; web application; gene expression; alternative splicing; visualization; molecular epidemiology
Online: 20 September 2021 (16:56:32 CEST)
ARTICLE
|
doi:10.20944/preprints202012.0496.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Hungateiclostridium thermocellum; adaptive laboratory evolution; RNA-seq; cellulosomal genes; EMP pathway; monosaccharides
Online: 21 December 2020 (10:36:00 CET)
ARTICLE
|
doi:10.20944/preprints201907.0140.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
PlGF; PGF; blood-retinal barrier; RNA Seq; HREC; gene ontology; fastQC; Trimmomatic; KEGG; pentose phosphate pathway; TGF-β
Online: 10 July 2019 (07:48:20 CEST)
REVIEW
|
doi:10.20944/preprints202312.2337.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
COVID-19; SARS-CoV-2; transcriptomics; RNA-seq; scRNA-seq; inflammation; pneumonia; neuronal COVID; acute respiratory disease syndrome; multisystem inflammatory syndrome
Online: 30 December 2023 (16:01:23 CET)
ARTICLE
|
doi:10.20944/preprints202408.1100.v1
Subject:
Biology And Life Sciences,
Insect Science
Keywords:
Brown planthopper; carbamate resistance; RNA-seq analysis; Nl-EST1; metabolic resistance
Online: 16 August 2024 (03:33:17 CEST)
ARTICLE
|
doi:10.20944/preprints202103.0187.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Transcriptome analysis; Capra hircus; Differential gene expression; Pashmina goat; Barbari goat; RNA-seq
Online: 5 March 2021 (11:50:26 CET)
ARTICLE
|
doi:10.20944/preprints202006.0144.v1
Subject:
Biology And Life Sciences,
Immunology And Microbiology
Keywords:
Corynebacterium pseudotuberculosis; RNA-Seq; co-expression networks; influence genes; stress condition; causal genes
Online: 12 June 2020 (08:46:02 CEST)
ARTICLE
|
doi:10.20944/preprints202407.2037.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
Pancreatic ductal adenocarcinoma (PDAC); single-cell RNA sequencing (scRNA-seq); Copy number variations (CNVs).
Online: 25 July 2024 (12:07:10 CEST)
ARTICLE
|
doi:10.20944/preprints202312.0628.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
IFITM; Influenza A virus; Human cells; WI-38; Genome editing; CRISPR/Cas9; RNA-seq
Online: 8 December 2023 (12:42:54 CET)
ARTICLE
|
doi:10.20944/preprints202202.0357.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
granulosa cells; heat stress; apoptosis; oxidative stress; RNA-seq; transcriptomics; differentially expressed genes; signaling pathways
Online: 28 February 2022 (11:08:42 CET)
REVIEW
|
doi:10.20944/preprints202003.0290.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Histone PTM; RNA Polymerase II; ChIP-seq; chromatin; epigenetics; transcriptional interference; plant; Transcription Cycle; Transcription
Online: 18 March 2020 (17:14:28 CET)
ARTICLE
|
doi:10.20944/preprints201808.0244.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
osteoarthritis; RNA-seq; STR/ort; C57BL/6; MRL/MpJ; ACL injury; PTOA; regeneration; inflammation; B4galnt2
Online: 14 August 2018 (05:47:38 CEST)
ARTICLE
|
doi:10.20944/preprints202403.0573.v1
Subject:
Medicine And Pharmacology,
Obstetrics And Gynaecology
Keywords:
RNA extraction; Cumulus Cells; Human; Gene Analysis, RNA stabilizer
Online: 11 March 2024 (05:39:28 CET)
ARTICLE
|
doi:10.20944/preprints202203.0110.v1
Subject:
Biology And Life Sciences,
Virology
Keywords:
benchmarking; bioinformatics; defective viral genomes; gradient boosting; machine learning; RNA-seq; SARS-CoV-2; virus replication
Online: 7 March 2022 (16:25:18 CET)
ARTICLE
|
doi:10.20944/preprints202112.0111.v1
Subject:
Biology And Life Sciences,
Plant Sciences
Keywords:
Durum wheat; heat stress; grain weight; grain quality; RNA-seq; gene regulatory network; DOF transcription factor
Online: 7 December 2021 (23:38:32 CET)
ARTICLE
|
doi:10.20944/preprints202401.0095.v1
Subject:
Computer Science And Mathematics,
Mathematical And Computational Biology
Keywords:
bioinformatics; small RNA; microbiome; non-coding RNA; biofluids; miRNA; isomiR; tRF; biomarker; cancer biology
Online: 3 January 2024 (10:26:07 CET)
REVIEW
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doi:10.20944/preprints202007.0466.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Alternative Splicing; RNA-Seq; Machine Learning; Deep Learning; Recommender Systems; Multiple Instance Learning; mRNA Isoforms; Gene Ontology
Online: 20 July 2020 (10:53:23 CEST)
ARTICLE
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doi:10.20944/preprints202004.0108.v1
Subject:
Biology And Life Sciences,
Food Science And Technology
Keywords:
prebiotics; oligosaccharides; GOS; FOS; RNA-seq; transcriptome; differential gene expression; functional pathway analysis; Caco-2; polarized monolayers
Online: 7 April 2020 (13:37:18 CEST)
ARTICLE
|
doi:10.20944/preprints201811.0183.v2
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
sequencing technologies; NGS; genome research; genome assembly; variant calling; RNA-Seq; transcriptome assembly; bioinformatics; molecular biology; education
Online: 13 November 2018 (10:22:06 CET)
ARTICLE
|
doi:10.20944/preprints202305.1961.v1
Subject:
Biology And Life Sciences,
Biology And Biotechnology
Keywords:
RNA silencing; Dicer-like (DCL); Argonaute (AGO); RNA-dependent RNA polymerase (RDR); heat stress; T. aestivum
Online: 29 May 2023 (04:28:28 CEST)
ARTICLE
|
doi:10.20944/preprints202312.1981.v1
Subject:
Medicine And Pharmacology,
Pathology And Pathobiology
Keywords:
SINE-VNTR-Alu; transposable elements; whole genome sequencing; RNA-seq; quantitative trait loci; Amyotrophic Lateral Sclerosis; HLA; MAPT
Online: 26 December 2023 (11:27:43 CET)
ARTICLE
|
doi:10.20944/preprints202205.0378.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Drosophila; leg imaginal disc; lncRNA; development; scRNA-seq; scATAC-seq
Online: 27 May 2022 (09:48:47 CEST)
ARTICLE
|
doi:10.20944/preprints202007.0395.v1
Subject:
Biology And Life Sciences,
Horticulture
Keywords:
Actinidia; waterlogging; RNA-sequencing; transcriptional adjustment
Online: 17 July 2020 (15:40:11 CEST)
ARTICLE
|
doi:10.20944/preprints201809.0406.v1
Subject:
Medicine And Pharmacology,
Pharmacology And Toxicology
Keywords:
Sutherlandia frutescens, RNA sequencing, inflammation, TNF
Online: 20 September 2018 (10:16:04 CEST)
ARTICLE
|
doi:10.20944/preprints202305.0530.v1
Subject:
Medicine And Pharmacology,
Oncology And Oncogenics
Keywords:
single-cell sequencing; epigenomic profiling; snATAC-seq; snRNA-seq; nuclei preparation
Online: 8 May 2023 (11:00:52 CEST)
ARTICLE
|
doi:10.20944/preprints202101.0443.v1
Subject:
Biology And Life Sciences,
Biochemistry And Molecular Biology
Keywords:
Trichome; type IV; K-seq; QTLs mapping; QTL-seq; tomato; Solanum pimpinellifolium
Online: 22 January 2021 (12:11:59 CET)