Tomography based on cosmic muon absorption is a rising technique because of its versatility and its consolidation as geophysics tool over the past decade. It allows to address major societal issues such as long-term stability of natural and man-made large infrastructures or sustainable underwater management. Traditionally, muon trackers consist of hodoscopes or multilayer detectors. For applications with challenging available volumes or wide field of view required, a thin time projection chamber (TPC) associated with a Micromegas readout plane can provide a good tradeoff between compactness and performance. This paper details the design of such a TPC aiming at maximizing primary signal and minimizing track reconstruction artifacts. The results of the measurements performed during a case study addressing the aforementioned applications are discussed. The current works lines and perspectives of the project are also presented.