Controlling the collective behavior of micro/nanomotors with ultrasound may enable new functionality in robotic, medicine and other engineering disciplines. Currently, various collective behaviors of nanomotors, such as assembly, reconfiguration and disassembly, have been explored by using acoustic fields with a fixed frequency, while regulating their collective behaviors by varying the ultrasound frequency still remains challenging. In this work, we design an ultrasound manipulation methodology allowing nanomotors to exhibit different collective behaviors by regulating the applied ultrasound frequency. This work has important implications for design of artificial actuated nanomotors and optimize their performances.